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PMC:7544943 / 29354-30184 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T30 126-134 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T31 154-162 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T32 538-546 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T33 567-575 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T132 21-23 http://purl.obolibrary.org/obo/CLO_0007622 denotes MD
T133 154-180 http://purl.obolibrary.org/obo/GO_0043234 denotes proteins and their complex
T134 720-721 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T135 797-801 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T136 824-828 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
699 362-366 Gene denotes Mpro Gene:8673700
700 371-375 Gene denotes Mpro Gene:8673700
701 186-194 Chemical denotes Piperine MESH:C008922
702 347-360 Chemical denotes Spro-Piperine
703 523-531 Chemical denotes Piperine MESH:C008922

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T255 0-101 Sentence denotes The RMSD values from MD simulation provide information about structural and conformational stability.
T256 102-195 Sentence denotes Figure 5 represents the backbone RMSD data of viral proteins and their complex with Piperine.
T257 196-305 Sentence denotes From the plot, it is observed that both the simulations have less fluctuation throughout the simulation time.
T258 306-491 Sentence denotes The average RMSD values of RBD Spro, RBD Spro-Piperine, Mpro and Mpro-Piperine are calculated as 0.143 ± 0.025 nm, 0.130 ± 0.018 nm, 0.212 ± 0.041 nm and 0.203 ± 0.028 nm, respectively.
T259 492-644 Sentence denotes The average RMSD values of the Piperine bound proteins as compared to only proteins are found to be less representing to their conformational stability.
T260 645-830 Sentence denotes Both the simulations are attained equilibrium within 0.3 nm, which is also a measure of the systems’ stability during the simulation (Al-Shabib et al., 2018, 2020; Millan et al., 2018).

2_test

Id Subject Object Predicate Lexical cue
32938313-32194324-56197396 803-807 32194324 denotes 2020