PMC:7544943 / 24900-25790 JSON TXT

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Id	Subject	Object	Predicate	Lexical cue	uberon_id
T8	13-17	Body_part	denotes	hand	http://purl.obolibrary.org/obo/UBERON_0002398

Id	Subject	Object	Predicate	Lexical cue	fma_id
T28	13-17	Body_part	denotes	hand	http://purl.org/sig/ont/fma/fma9712

Id	Subject	Object	Predicate	Lexical cue	mondo_id
T56	84-92	Disease	denotes	SARS-CoV	http://purl.obolibrary.org/obo/MONDO_0005091

Id	Subject	Object	Predicate	Lexical cue
T120	295-296	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a

Id	Subject	Object	Predicate	Lexical cue	tao:has_database_id
465	84-94	Species	denotes	SARS-CoV-2	Tax:2697049
466	19-27	Chemical	denotes	Gingerol	MESH:C007845
467	132-138	Chemical	denotes	GLY164
468	140-146	Chemical	denotes	ASN169
469	148-154	Chemical	denotes	ASN501
470	160-166	Chemical	denotes	GLY170
471	187-195	Chemical	denotes	hydrogen	MESH:D006859
472	218-226	Chemical	denotes	Gingerol	MESH:C007845
473	243-251	Chemical	denotes	hydrogen	MESH:D006859
474	269-275	Chemical	denotes	TYR173
475	277-283	Chemical	denotes	TYR505
476	333-340	Chemical	denotes	benzene	MESH:D001554
477	349-357	Chemical	denotes	Gingerol	MESH:C007845
478	364-369	Chemical	denotes	ARG71
479	371-377	Chemical	denotes	ARG403
480	380-386	Chemical	denotes	TYR121
481	388-394	Chemical	denotes	TYR453
482	397-403	Chemical	denotes	TYR163
483	405-411	Chemical	denotes	TYR495
484	414-420	Chemical	denotes	PHE165
485	422-428	Chemical	denotes	PHE497
486	434-440	Chemical	denotes	GLN166
487	442-448	Chemical	denotes	GLN498
488	507-520	Chemical	denotes	Terpinen-4-ol	MESH:C034019
489	580-586	Chemical	denotes	ARG125
490	588-594	Chemical	denotes	LYS126
491	596-602	Chemical	denotes	TYR141
492	607-613	Chemical	denotes	PRO159
493	633-639	Chemical	denotes	ARG122
494	641-647	Chemical	denotes	PHE124
495	649-655	Chemical	denotes	ASP135
496	657-663	Chemical	denotes	SER137
497	665-671	Chemical	denotes	GLU139
498	676-682	Chemical	denotes	ILE140
499	731-744	Chemical	denotes	Terpinen-4-ol	MESH:C034019

Id	Subject	Object	Predicate	Lexical cue
T219	0-118	Sentence	denotes	On the other hand, Gingerol is stabilized by various kinds of interactions with the SARS-CoV-2 RBD Spro (Figure 3(c)).
T220	119-227	Sentence	denotes	The residues GLY164, ASN169 (ASN501) and GLY170 are associated with hydrogen bond interaction with Gingerol.
T221	228-502	Sentence	denotes	Other than the hydrogen bond interaction TYR173 (TYR505) is having a pi–pi T-shaped interaction with the benzene ring of Gingerol while ARG71 (ARG403), TYR121 (TYR453), TYR163 (TYR495), PHE165 (PHE497) and GLN166 (GLN498) residues are involved in van der Waals interactions.
T222	503-759	Sentence	denotes	The Terpinen-4-ol is stabilized by hydrophobic interaction with the residues ARG125, LYS126, TYR141 and PRO159 while the residues ARG122, PHE124, ASP135, SER137, GLU139 and ILE140 are involved in van der Waals interactions with Terpinen-4-ol (Figure 3(d)).
T223	760-890	Sentence	denotes	The lowest energy poses of the rest 26 molecules along with their 2D interaction diagrams are provided in Supplementary Figure S3.