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PMC:7544943 / 16632-18044 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T20 381-405 Body_part denotes biological macromolecule http://purl.org/sig/ont/fma/fma63887

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T48 722-730 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T73 112-113 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T74 187-193 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T75 289-295 http://purl.obolibrary.org/obo/CLO_0001658 denotes active
T76 379-380 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 562-567 http://purl.obolibrary.org/obo/CLO_0007225 denotes label
T78 864-866 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T79 864-866 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T80 994-995 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 1131-1139 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively
T82 1288-1296 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
282 722-732 Species denotes SARS-CoV-2 Tax:2697049
283 746-750 Gene denotes Mpro Gene:8673700

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T13 99-108 http://purl.obolibrary.org/obo/GO_0007610 denotes behaviour
T14 1394-1411 http://purl.obolibrary.org/obo/GO_0019079 denotes viral replication
T15 1394-1411 http://purl.obolibrary.org/obo/GO_0019058 denotes viral replication

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T155 0-123 Sentence denotes The electrostatic potential is an essential property for the review and prediction of the reactive behaviour of a molecule.
T156 124-375 Sentence denotes The study of the MEP surface can provide information about the active site of the macromolecule with the indication of relative ligand orientation and nature of the active site at which an approaching electrophile is attracted (Politzer et al., 1985).
T157 376-523 Sentence denotes In a biological macromolecule, the electrostatic potential surface is plotted by analysing the electron-rich and deficient regions of the molecule.
T158 524-687 Sentence denotes The detailed insight at the molecular label helps to predict the potentiality of the ligands to take part in chemical reactions and their mechanism of interaction.
T159 688-867 Sentence denotes The MEP surface representation of SARS-CoV-2 RBD Spro and Mpro ligand-binding sites with the simultaneous presence of all docked molecules are provided in Supplementary Figure S2.
T160 868-1062 Sentence denotes The electronically poor regions (blue) are referred to as positive potential, whereas the dense electron regions (red) are at a negative potential, and the white zones are considered as neutral.
T161 1063-1237 Sentence denotes From the figure, it is observed that most of the selected molecules actively bound at the red regions that are referred to as highly negative electrostatic potential regions.
T162 1238-1412 Sentence denotes This implies that the molecules are polar and can actively take part in the binding process with stable interactions, which in turn could help to block the viral replication.

2_test

Id Subject Object Predicate Lexical cue
32938313-2866089-56197386 369-373 2866089 denotes 1985