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LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 82-90 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 162-170 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T3 569-577 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 715-723 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 959-969 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T6 972-980 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 1032-1041 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T8 1131-1139 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T9 1427-1442 Disease denotes viral infection http://purl.obolibrary.org/obo/MONDO_0005108
T10 1433-1442 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T11 1900-1908 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 2293-2301 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 2717-2725 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 3009-3017 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T15 3160-3168 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 3286-3294 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T17 3590-3598 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 4097-4105 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T19 5316-5325 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T20 5865-5873 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T21 5972-5980 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 464-465 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 546-554 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively
T3 693-694 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 984-985 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 1003-1004 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 1071-1072 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 1142-1147 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T8 1283-1284 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1376-1377 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 2788-2790 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T11 3488-3495 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testing
T12 3554-3562 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively
T13 3649-3651 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T14 3890-3892 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T15 4347-4348 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 5299-5300 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 5344-5345 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 5746-5754 http://purl.obolibrary.org/obo/CLO_0001658 denotes actively

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 705-710 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T2 823-831 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T3 1652-1660 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T4 5695-5703 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 82-90 Disease denotes COVID-19 MESH:C000657245
6 162-172 Species denotes SARS-CoV-2 Tax:2697049
7 569-577 Disease denotes COVID-19 MESH:C000657245
8 715-723 Disease denotes COVID-19 MESH:C000657245
9 959-969 Disease denotes infections MESH:D007239
15 1131-1141 Species denotes SARS-CoV-2 Tax:2697049
16 972-980 Disease denotes COVID-19 MESH:C000657245
17 1032-1041 Disease denotes infection MESH:D007239
18 1427-1442 Disease denotes viral infection MESH:D001102
19 1900-1908 Disease denotes COVID-19 MESH:C000657245
23 2293-2301 Disease denotes COVID-19 MESH:C000657245
24 2501-2506 Disease denotes COVID MESH:C000657245
25 2717-2725 Disease denotes COVID-19 MESH:C000657245
27 3009-3017 Disease denotes COVID-19 MESH:C000657245
33 3930-3938 Species denotes patients Tax:9606
34 3160-3168 Disease denotes COVID-19 MESH:C000657245
35 3286-3294 Disease denotes COVID-19 MESH:C000657245
36 3590-3598 Disease denotes COVID-19 MESH:C000657245
37 4097-4105 Disease denotes COVID-19 MESH:C000657245
42 5398-5404 Species denotes people Tax:9606
43 5583-5595 Species denotes participants Tax:9606
44 5316-5325 Disease denotes infection MESH:D007239
45 5865-5873 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 1427-1442 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infection
T2 4550-4556 http://purl.obolibrary.org/obo/GO_0060361 denotes flight

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-25 Sentence denotes Traveling into the Abyss:
T2 26-99 Sentence denotes Risk Perception of German Travelers at the Onset of the COVID-19 Pandemic
T3 101-109 Sentence denotes Abstract
T4 110-119 Sentence denotes Abstract.
T5 120-305 Sentence denotes The emergence and international spread of SARS-CoV-2 led to unprecedented challenges for international travelers including health-related concerns and international travel restrictions.
T6 306-755 Sentence denotes Remarkably, overseas travelers consulted at our travel clinic during the first quarter of 2020 were apparently not disconcerted by the evolving pandemic with a continuously high rate of consultations at our center; 85% of travelers did not actively inquire about COVID-19 during the pretravel consultation including individuals with clinically significant immunosuppression constituting a high-risk group for COVID-19–related adverse health outcome.
T7 756-970 Sentence denotes This experience demonstrates the societal responsibility of travel medicine practitioners to proactively provide unbiased information about the health-related and travel-related impact of newly emerging infections.
T8 972-1335 Sentence denotes COVID-19 is a prime example of a rapidly spreading emerging infection with international travel as a main route of geographical spread.1 The dynamic spread of SARS-CoV-2 virus was followed by an unparalleled political response in affected countries, leading to unprecedented travel restrictions and at times to a near to complete halt of international air travel.
T9 1336-1593 Sentence denotes Travelers were suddenly confronted with a dynamic epidemiological situation of an emerging viral infection, largely unknown risks for personal health during travel, and unpredictable travel restrictions with the potential to impede return to home countries.
T10 1594-1759 Sentence denotes This situation led to an exceptional challenge for travel medicine practitioners to quickly and adequately respond in their daily practice to the evolving situation.
T11 1760-1935 Sentence denotes To allow for informed and adequate travel recommendations, an understanding of the risk perception of travelers with regard to the evolving COVID-19 pandemic is of importance.
T12 1936-2032 Sentence denotes Here, we evaluated how travelers perceived this risk at the onset of the international outbreak.
T13 2033-2246 Sentence denotes Our travel clinic at the University Medical Center Hamburg is one of the largest travel clinics in Germany providing pretravel advice and travel-related vaccinations as well as health care for returning travelers.
T14 2247-2434 Sentence denotes Despite reports of an international spread of COVID-19 in January 2020, the number of pretravel consultations at our center remained constant at 200–300 consultations per week (Figure 1).
T15 2435-2619 Sentence denotes Similarly, the dramatic increase in the number of global cases of COVID-10 in February and first cases in Germany in week 5 had no impact on interest in overseas travel by our clients.
T16 2620-2912 Sentence denotes To better understand this apparent discrepancy, we collected information about the perception of COVID-19 by clients planning imminent overseas travel between February 27, 2020 and the March 6, 2020 at the onset of the outbreak in Europe as part of an institutional quality assurance program.
T17 2913-2922 Sentence denotes Figure 1.
T18 2924-3027 Sentence denotes Number of cases (Germany and global) and number of consultations at the onset of the COVID-19 pandemic.
T19 3028-3074 Sentence denotes This figure appears in color at www.ajtmh.org.
T20 3075-3308 Sentence denotes Overall, 85% of the clients (218 of 258) did not inquire about information about the COVID-19 outbreak during the consultation; 21% of those planned trips to East and Southeast Asia—the regions most affected by COVID-19 at that time.
T21 3309-3522 Sentence denotes The most frequent other travel destinations were Africa and Latin America, regions for which only scarce epidemiological information was available at that time because of limited testing capacity in these regions.
T22 3523-3798 Sentence denotes And, 40 of 258 (16%) travelers actively inquired about the current COVID-19 situation and how this might affect their travel; 11 of the 40 (28%) had serious concerns about their trip and asked for recommendations whether they should cancel the trip under these circumstances.
T23 3799-3923 Sentence denotes The remaining 29 of 40 (73%) clients mentioned the outbreak with minor concern, among whom 11 were flying to Southeast Asia.
T24 3924-4106 Sentence denotes Three patients with clinically significant immunosuppression and, therefore, considered to be among the highest risk groups for adverse health outcome did not inquire about COVID-19.
T25 4107-4608 Sentence denotes In the same period of time, the number of confirmed cases started to increase exponentially in Germany, as shown in Figure 1, and case numbers in many travel destinations increased concomitantly.2 Five days after the end of our assessment, a global pandemic was declared by the Secretary General of the United Nations, and another 5 days later, the German Federal Foreign Office advised against all nonessential travel to other countries, and flight connections were stopped to most foreign countries.
T26 4609-4986 Sentence denotes Despite the dramatic epidemiological situation and the importance of international travel as route of intercontinental transmission, the vast majority of travelers at our center did not appreciate the health risks and logistical challenges posed by the evolving pandemic just before the international ban on travel and the near to complete lockdown on international air travel.
T27 4987-5166 Sentence denotes This was in stark contrast to the growing concern in Germany at the same time.3 Already since the end of January, panic buying and hoardings were reported from German communities.
T28 5167-5483 Sentence denotes To our understanding, this experience astoundingly demonstrates that the societal response to an imminent epidemiological threat by a viral emerging infection is not uniform in a population such as in Germany with highly concerned people on one end of the spectrum and individuals negating any risk on the other end.
T29 5484-5874 Sentence denotes Despite the many limitations of this survey including small sample size, limited information about participants, and reasons for travel, this experience highlights the responsibility and societal duty of travel medicine specialists to proactively address and to actively provide balanced information about health risks and travel challenges associated with major pandemics such as COVID-19.
T30 5876-5891 Sentence denotes Acknowledgment:
T31 5892-5981 Sentence denotes Publication charges for this article were waived due to the ongoing pandemic of COVID-19.