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PMC:7543426 / 7742-9884 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T43 292-297 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T44 399-421 Body_part denotes Atrioventricular valve http://purl.org/sig/ont/fma/fma7233
T45 472-478 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T46 878-894 Body_part denotes Pulmonary artery http://purl.org/sig/ont/fma/fma66326
T47 1173-1179 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T48 1482-1485 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T49 1608-1616 Body_part denotes Prostate http://purl.org/sig/ont/fma/fma9600
T50 1788-1796 Body_part denotes Prostate http://purl.org/sig/ont/fma/fma9600

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T36 292-297 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T37 399-421 Body_part denotes Atrioventricular valve http://purl.obolibrary.org/obo/UBERON_0002133
T38 416-421 Body_part denotes valve http://purl.obolibrary.org/obo/UBERON_0003978
T39 472-478 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T40 878-894 Body_part denotes Pulmonary artery http://purl.obolibrary.org/obo/UBERON_0002012
T41 888-894 Body_part denotes artery http://purl.obolibrary.org/obo/UBERON_0001637
T42 1173-1179 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T64 242-254 Disease denotes Hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T65 283-305 Disease denotes Ischemic heart disease http://purl.obolibrary.org/obo/MONDO_0024644
T66 292-305 Disease denotes heart disease http://purl.obolibrary.org/obo/MONDO_0005267
T67 306-320 Disease denotes Cardiomyopathy http://purl.obolibrary.org/obo/MONDO_0004994
T68 322-337 Disease denotes Aortic aneurysm http://purl.obolibrary.org/obo/MONDO_0005160
T69 389-397 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T70 433-452 Disease denotes Atrial fibrillation http://purl.obolibrary.org/obo/MONDO_0004981
T71 454-458 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T72 472-486 Disease denotes Kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T74 530-534 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T75 586-599 Disease denotes Schizophrenia http://purl.obolibrary.org/obo/MONDO_0005090
T76 652-674 Disease denotes Cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T77 683-691 Disease denotes dementia http://purl.obolibrary.org/obo/MONDO_0001627
T78 744-766 Disease denotes Cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T79 768-772 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T80 896-906 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T81 958-972 Disease denotes Myelodysplasia http://purl.obolibrary.org/obo/MONDO_0018881
T82 1017-1032 Disease denotes Aortic aneurysm http://purl.obolibrary.org/obo/MONDO_0005160
T83 1034-1038 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T84 1159-1171 Disease denotes Hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T85 1173-1187 Disease denotes Kidney disease http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240
T87 1189-1197 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T88 1199-1203 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T89 1205-1212 Disease denotes Obesity http://purl.obolibrary.org/obo/MONDO_0011122
T90 1266-1288 Disease denotes Cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T91 1290-1298 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T92 1300-1320 Disease denotes Psychiatric disorder http://purl.obolibrary.org/obo/MONDO_0002025
T93 1386-1390 Disease denotes COPD http://purl.obolibrary.org/obo/MONDO_0005002
T94 1392-1428 Disease denotes Hypertension Cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0001302
T95 1392-1404 Disease denotes Hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T96 1406-1428 Disease denotes Cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T97 1482-1495 Disease denotes HIV infection http://purl.obolibrary.org/obo/MONDO_0005109
T98 1486-1495 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T99 1548-1565 Disease denotes Parkinson disease http://purl.obolibrary.org/obo/MONDO_0005180
T100 1567-1579 Disease denotes Hypertension http://purl.obolibrary.org/obo/MONDO_0005044
T101 1581-1606 Disease denotes Transient ischemic attack http://purl.obolibrary.org/obo/MONDO_0005264
T102 1608-1628 Disease denotes Prostate hypertrophy http://purl.obolibrary.org/obo/MONDO_0010811
T103 1682-1690 Disease denotes Diabetes http://purl.obolibrary.org/obo/MONDO_0005015
T104 1743-1755 Disease denotes Endocarditis http://purl.obolibrary.org/obo/MONDO_0005025
T105 1788-1808 Disease denotes Prostate hypertrophy http://purl.obolibrary.org/obo/MONDO_0010811
T106 1810-1825 Disease denotes Aortic aneurysm http://purl.obolibrary.org/obo/MONDO_0005160
T107 1827-1846 Disease denotes Atrial fibrillation http://purl.obolibrary.org/obo/MONDO_0004981
T108 2098-2141 Disease denotes COPD, chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005002
T109 2124-2141 Disease denotes pulmonary disease http://purl.obolibrary.org/obo/MONDO_0005275

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T103 292-297 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T104 292-297 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T105 292-297 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T106 292-297 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T107 322-328 http://www.ebi.ac.uk/efo/EFO_0000265 denotes Aortic
T108 416-421 http://www.ebi.ac.uk/efo/EFO_0000825 denotes valve
T109 472-478 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T110 472-478 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T111 472-478 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T112 878-894 http://purl.obolibrary.org/obo/UBERON_0002012 denotes Pulmonary artery
T113 878-894 http://www.ebi.ac.uk/efo/EFO_0001399 denotes Pulmonary artery
T114 1017-1023 http://www.ebi.ac.uk/efo/EFO_0000265 denotes Aortic
T115 1069-1071 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T116 1173-1179 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T117 1173-1179 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T118 1173-1179 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T119 1467-1469 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T120 1721-1723 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T121 1725-1730 http://purl.obolibrary.org/obo/CLO_0007489 denotes M 86
T122 1810-1816 http://www.ebi.ac.uk/efo/EFO_0000265 denotes Aortic
T123 1934-1936 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T124 2026-2028 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
243 93-100 Species denotes Patient Tax:9606
244 188-193 Disease denotes Death MESH:D003643
245 215-220 Disease denotes Death MESH:D003643
246 389-421 Disease denotes Diabetes Atrioventricular valve MESH:D003920
247 433-486 Disease denotes Atrial fibrillation COPD Malignancy Kidney disease MESH:D001281
248 491-516 Disease denotes Cardiorespiratory failure MESH:D006333
249 530-564 Disease denotes COPD 1 Cardiorespiratory failure MESH:D029424
250 586-630 Disease denotes Schizophrenia 28 Cardiorespiratory failure MESH:C563812
251 652-691 Disease denotes Cardiovascular disease Senile dementia MESH:D002318
252 697-722 Disease denotes Cardiorespiratory failure MESH:D006333
253 744-802 Disease denotes Cardiovascular disease COPD 3 Cardiorespiratory failure MESH:D002318
254 816-856 Disease denotes Malignancy 2 Cardiorespiratory failure MESH:D006333
255 878-936 Disease denotes Pulmonary artery thrombosis 4 Cardiorespiratory failure MESH:D012131
256 958-1002 Disease denotes Myelodysplasia 4 Cardiorespiratory failure MESH:C564499
257 1017-1038 Disease denotes Aortic aneurysm COPD MESH:D001014
258 1043-1068 Disease denotes Cardiorespiratory failure MESH:D006333
259 1107-1132 Disease denotes Cardiorespiratory failure MESH:D006333
260 1147-1187 Disease denotes Malignancy Hypertension Kidney disease MESH:D006974
261 1189-1243 Disease denotes Diabetes COPD Obesity 29 Cardiorespiratory failure MESH:D003920
262 1266-1320 Disease denotes Cardiovascular disease Diabetes Psychiatric disorder MESH:D002318
263 1326-1351 Disease denotes Cardiorespiratory failure MESH:D006333
264 1374-1428 Disease denotes Malignancy COPD Hypertension Cardiovascular disease MESH:D002318
265 1434-1459 Disease denotes Cardiorespiratory failure MESH:D006333
266 1482-1525 Disease denotes HIV infection 6 Cardiorespiratory failure MESH:D015658
267 1682-1720 Disease denotes Diabetes 1 Cardiorespiratory failure MESH:D003922
268 1743-1755 Disease denotes Endocarditis MESH:D004696
269 1781-1879 Disease denotes aureus Prostate hypertrophy Aortic aneurysm Atrial fibrillation 1 Cardiorespiratory failure 19 MESH:C000657245
270 1901-1926 Disease denotes Cardiorespiratory failure MESH:D006333
271 1950-1975 Disease denotes Cardiorespiratory failure MESH:D006333
272 2000-2025 Disease denotes Cardiorespiratory failure MESH:D006333
273 2058-2083 Disease denotes Cardiorespiratory failure MESH:D006333
275 87-92 Disease denotes Death MESH:D003643
278 2098-2102 Disease denotes COPD MESH:D029424
279 2104-2141 Disease denotes chronic obstructive pulmonary disease MESH:D029424

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 242-254 Phenotype denotes Hypertension http://purl.obolibrary.org/obo/HP_0000822
T7 306-320 Phenotype denotes Cardiomyopathy http://purl.obolibrary.org/obo/HP_0001638
T8 322-337 Phenotype denotes Aortic aneurysm http://purl.obolibrary.org/obo/HP_0004942
T9 433-452 Phenotype denotes Atrial fibrillation http://purl.obolibrary.org/obo/HP_0005110
T10 454-458 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T11 472-486 Phenotype denotes Kidney disease http://purl.obolibrary.org/obo/HP_0000112
T12 530-534 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T13 586-599 Phenotype denotes Schizophrenia http://purl.obolibrary.org/obo/HP_0100753
T14 652-674 Phenotype denotes Cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T15 683-691 Phenotype denotes dementia http://purl.obolibrary.org/obo/HP_0000726
T16 744-766 Phenotype denotes Cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T17 768-772 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T18 888-906 Phenotype denotes artery thrombosis http://purl.obolibrary.org/obo/HP_0004420
T19 958-972 Phenotype denotes Myelodysplasia http://purl.obolibrary.org/obo/HP_0002863
T20 1017-1032 Phenotype denotes Aortic aneurysm http://purl.obolibrary.org/obo/HP_0004942
T21 1034-1038 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T22 1159-1171 Phenotype denotes Hypertension http://purl.obolibrary.org/obo/HP_0000822
T23 1173-1187 Phenotype denotes Kidney disease http://purl.obolibrary.org/obo/HP_0000112
T24 1199-1203 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T25 1205-1212 Phenotype denotes Obesity http://purl.obolibrary.org/obo/HP_0001513
T26 1266-1288 Phenotype denotes Cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T27 1300-1320 Phenotype denotes Psychiatric disorder http://purl.obolibrary.org/obo/HP_0000708
T28 1386-1390 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T29 1392-1404 Phenotype denotes Hypertension http://purl.obolibrary.org/obo/HP_0000822
T30 1406-1428 Phenotype denotes Cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T31 1548-1557 Phenotype denotes Parkinson http://purl.obolibrary.org/obo/HP_0001300
T32 1567-1579 Phenotype denotes Hypertension http://purl.obolibrary.org/obo/HP_0000822
T33 1581-1606 Phenotype denotes Transient ischemic attack http://purl.obolibrary.org/obo/HP_0002326
T34 1743-1755 Phenotype denotes Endocarditis http://purl.obolibrary.org/obo/HP_0100584
T35 1810-1825 Phenotype denotes Aortic aneurysm http://purl.obolibrary.org/obo/HP_0004942
T36 1827-1846 Phenotype denotes Atrial fibrillation http://purl.obolibrary.org/obo/HP_0005110
T37 2098-2102 Phenotype denotes COPD http://purl.obolibrary.org/obo/HP_0006510
T38 2104-2141 Phenotype denotes chronic obstructive pulmonary disease http://purl.obolibrary.org/obo/HP_0006510

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T82 0-8 Sentence denotes Table 2.
T83 10-92 Sentence denotes Demographics, Comorbidities, Duration of Hospital Stay, and Autopsy Cause of Death
T84 93-220 Sentence denotes Patient Number Sex, M/F Age, y Onset of Symptoms, d Comorbidities Days in Hospital Before Death Postmortem Cause of Death
T85 221-367 Sentence denotes 1 M 81 Not known Hypertension Aortomyocardial sclerosis Ischemic heart disease Cardiomyopathy Aortic aneurysm 4 Cardiorespiratory failure
T86 368-516 Sentence denotes 2 F 82 Not known Diabetes Atrioventricular valve prothesis Atrial fibrillation COPD Malignancy Kidney disease 3 Cardiorespiratory failure
T87 517-564 Sentence denotes 3 M 92 7 COPD 1 Cardiorespiratory failure
T88 565-630 Sentence denotes 4 F 69 Not known Schizophrenia 28 Cardiorespiratory failure
T89 631-722 Sentence denotes 5 F 80 Not known Cardiovascular disease Senile dementia 38 Cardiorespiratory failure
T90 723-802 Sentence denotes 6 M 92 Not known Cardiovascular disease COPD 3 Cardiorespiratory failure
T91 803-856 Sentence denotes 7 F 64 4 Malignancy 2 Cardiorespiratory failure
T92 857-936 Sentence denotes 8 M 58 Not known Pulmonary artery thrombosis 4 Cardiorespiratory failure
T93 937-1002 Sentence denotes 9 M 64 Not known Myelodysplasia 4 Cardiorespiratory failure
T94 1003-1068 Sentence denotes 10 M 82 3 Aortic aneurysm COPD 5 Cardiorespiratory failure
T95 1069-1132 Sentence denotes 11 M 76 Not known Malignancy 30 Cardiorespiratory failure
T96 1133-1243 Sentence denotes 12 M 60 6 Malignancy Hypertension Kidney disease Diabetes COPD Obesity 29 Cardiorespiratory failure
T97 1244-1351 Sentence denotes 13 F 70 Not known Cardiovascular disease Diabetes Psychiatric disorder 43 Cardiorespiratory failure
T98 1352-1459 Sentence denotes 14 M 76 Not known Malignancy COPD Hypertension Cardiovascular disease 33 Cardiorespiratory failure
T99 1460-1525 Sentence denotes 15 F 27 Not known HIV infection 6 Cardiorespiratory failure
T100 1526-1659 Sentence denotes 16 M 82 Not known Parkinson disease Hypertension Transient ischemic attack Prostate hypertrophy 14 Cardiorespiratory failure
T101 1660-1720 Sentence denotes 17 M 57 Not known Diabetes 1 Cardiorespiratory failure
T102 1721-1876 Sentence denotes 18 M 86 Not known Endocarditis caused by Staphylococcus aureus Prostate hypertrophy Aortic aneurysm Atrial fibrillation 1 Cardiorespiratory failure
T103 1877-1926 Sentence denotes 19 M 54 4 NONE 16 Cardiorespiratory failure
T104 1927-1975 Sentence denotes 20 M 35 5 NONE 7 Cardiorespiratory failure
T105 1976-2025 Sentence denotes 21 M 65 7 NONE 12 Cardiorespiratory failure
T106 2026-2083 Sentence denotes 22 F 43 Not known NONE 25 Cardiorespiratory failure
T107 2084-2142 Sentence denotes Abbreviation: COPD, chronic obstructive pulmonary disease.