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PMC:7543426 / 6147-6769 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T39 45-49 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T40 129-133 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T41 134-141 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T33 45-49 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T34 129-133 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T53 31-39 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T87 45-49 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T88 45-49 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T89 129-133 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T90 129-133 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T91 220-223 http://purl.obolibrary.org/obo/CLO_0001387 denotes 4°C
T92 445-446 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T93 562-563 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 564-571 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
178 31-41 Species denotes SARS-CoV-2 Tax:2697049
179 163-177 Chemical denotes glutaraldehyde MESH:D005976
180 187-204 Chemical denotes cacodylate buffer
181 256-260 Chemical denotes OsO4
182 301-308 Chemical denotes ethanol MESH:D000431
183 411-425 Chemical denotes uranyl acetate MESH:C005460

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T53 0-58 Sentence denotes We only looked for evidence of SARS-CoV-2 in lung samples.
T54 59-128 Sentence denotes Nonlung samples were not subject to transmission electron microscopy.
T55 129-224 Sentence denotes Lung tissues were fixed with 2.5% glutaraldehyde in 0.1 M cacodylate buffer for 4 hours at 4°C.
T56 225-261 Sentence denotes Fixation was performed with 1% OsO4.
T57 262-370 Sentence denotes Samples were then dehydrated in graded ethanol and embedded in Epon resin, as previously described [14, 15].
T58 371-535 Sentence denotes Ultrathin sections were stained with 2% uranyl acetate and examined under a transmission electron microscope (JEOL JEM 2100 Plus; Japan Electron Optics Laboratory).
T59 536-622 Sentence denotes Images were captured with a digital camera (Tietz Video and Image Processing Systems).

2_test

Id Subject Object Predicate Lexical cue
32914853-31217430-61098655 362-364 31217430 denotes 14
32914853-24813622-61098656 366-368 24813622 denotes 15