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PMC:7543426 / 24779-26093 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T265 546-551 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T266 565-575 Body_part denotes adventitia http://purl.org/sig/ont/fma/fma45635
T267 597-602 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T268 671-677 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T269 787-793 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T270 980-985 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T271 989-995 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T272 1199-1216 Body_part denotes respiratory tract http://purl.org/sig/ont/fma/fma265130
T273 1233-1238 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T134 565-575 Body_part denotes adventitia http://purl.obolibrary.org/obo/UBERON_0005742
T135 597-602 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T136 671-677 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T137 787-793 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T138 980-985 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T139 989-995 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T140 1199-1216 Body_part denotes respiratory tract http://purl.obolibrary.org/obo/UBERON_0000065
T141 1233-1238 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T180 93-101 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T181 174-182 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T182 516-528 Disease denotes pericarditis http://purl.obolibrary.org/obo/MONDO_0005904
T183 647-669 Disease denotes cardiovascular disease http://purl.obolibrary.org/obo/MONDO_0004995
T184 678-684 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T185 720-728 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T186 939-945 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T187 1022-1030 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T188 1175-1191 Disease denotes viral infections http://purl.obolibrary.org/obo/MONDO_0005108
T189 1239-1245 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T374 196-199 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T375 379-385 http://purl.obolibrary.org/obo/UBERON_0000948 denotes hearts
T376 379-385 http://purl.obolibrary.org/obo/UBERON_0007100 denotes hearts
T377 379-385 http://purl.obolibrary.org/obo/UBERON_0015228 denotes hearts
T378 379-385 http://www.ebi.ac.uk/efo/EFO_0000815 denotes hearts
T379 546-551 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T380 597-602 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T381 597-602 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T382 597-602 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T383 597-602 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T384 671-677 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T385 671-677 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T386 671-677 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T387 685-688 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T388 787-793 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T389 787-793 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T390 787-793 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T391 980-985 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T392 980-985 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T393 989-995 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T394 989-995 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T395 989-995 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T396 1047-1048 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T397 1233-1238 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T398 1233-1238 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T399 1272-1273 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T400 1310-1312 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
645 423-431 Species denotes patients Tax:9606
646 729-737 Species denotes patients Tax:9606
647 797-805 Species denotes patients Tax:9606
648 880-888 Species denotes Patients Tax:9606
649 1022-1032 Species denotes SARS-CoV-2 Tax:2697049
650 93-101 Disease denotes COVID-19 MESH:C000657245
651 144-163 Disease denotes Cardiac involvement MESH:D006331
652 174-182 Disease denotes COVID-19 MESH:C000657245
653 303-312 Disease denotes mortality MESH:D003643
654 516-528 Disease denotes pericarditis MESH:D010493
655 647-669 Disease denotes cardiovascular disease MESH:D002318
656 671-684 Disease denotes Kidney injury MESH:D058186
657 720-728 Disease denotes COVID-19 MESH:C000657245
658 931-945 Disease denotes hepatic injury MESH:D056486
659 989-1002 Disease denotes kidney damage MESH:D007674
660 1175-1191 Disease denotes viral infections MESH:D001102
661 1233-1245 Disease denotes liver injury MESH:D017093

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T82 516-528 Phenotype denotes pericarditis http://purl.obolibrary.org/obo/HP_0001701
T83 647-669 Phenotype denotes cardiovascular disease http://purl.obolibrary.org/obo/HP_0001626
T84 989-1002 Phenotype denotes kidney damage http://purl.obolibrary.org/obo/HP_0000112

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T39 183-195 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T40 1109-1130 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T41 1175-1191 http://purl.obolibrary.org/obo/GO_0016032 denotes viral infections

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T280 0-143 Sentence denotes Several publications have shown an association of the severity of the clinical expression of COVID-19 with the number of comorbidities present.
T281 144-318 Sentence denotes Cardiac involvement in severe COVID-19 pathogenesis has been well documented [23], and cardiac risk factors have been identified as risk factors for increased mortality [24].
T282 319-463 Sentence denotes In our study of the macroscopic and microscopic features of hearts we found several differences between patients with and without comorbidities.
T283 464-670 Sentence denotes The 4 cases without comorbidities showed pronounced pericarditis and inflammatory cells infiltrating adventitia, indicating that the heart can be compromised irrespective of previous cardiovascular disease.
T284 671-743 Sentence denotes Kidney injury has been reported in nearly 30% of COVID-19 patients [25].
T285 744-879 Sentence denotes We found that histopathological changes in kidney in patients without comorbidities appeared more severe that those with comorbidities.
T286 880-946 Sentence denotes Patients without comorbidities also showed greater hepatic injury.
T287 947-1157 Sentence denotes Whether these findings represent liver or kidney damage caused directly by SARS-CoV-2 itself or are a reflection of the consequences of an abnormal and excessive inflammatory response, requires definition [26].
T288 1158-1314 Sentence denotes Studies of other viral infections of the respiratory tract have shown that liver injury may be immune mediated or a result of direct cytopathic damage [27].

2_test

Id Subject Object Predicate Lexical cue
32914853-32125455-61098666 222-224 32125455 denotes 23
32914853-32306491-61098667 314-316 32306491 denotes 24
32914853-32170806-61098668 1153-1155 32170806 denotes 26
32914853-32274342-61098669 1310-1312 32274342 denotes 27