PMC:7543426 / 24779-26093
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T265 | 546-551 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T266 | 565-575 | Body_part | denotes | adventitia | http://purl.org/sig/ont/fma/fma45635 |
T267 | 597-602 | Body_part | denotes | heart | http://purl.org/sig/ont/fma/fma7088 |
T268 | 671-677 | Body_part | denotes | Kidney | http://purl.org/sig/ont/fma/fma7203 |
T269 | 787-793 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T270 | 980-985 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T271 | 989-995 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T272 | 1199-1216 | Body_part | denotes | respiratory tract | http://purl.org/sig/ont/fma/fma265130 |
T273 | 1233-1238 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T134 | 565-575 | Body_part | denotes | adventitia | http://purl.obolibrary.org/obo/UBERON_0005742 |
T135 | 597-602 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
T136 | 671-677 | Body_part | denotes | Kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T137 | 787-793 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T138 | 980-985 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T139 | 989-995 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T140 | 1199-1216 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
T141 | 1233-1238 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T180 | 93-101 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T181 | 174-182 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T182 | 516-528 | Disease | denotes | pericarditis | http://purl.obolibrary.org/obo/MONDO_0005904 |
T183 | 647-669 | Disease | denotes | cardiovascular disease | http://purl.obolibrary.org/obo/MONDO_0004995 |
T184 | 678-684 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
T185 | 720-728 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T186 | 939-945 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
T187 | 1022-1030 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T188 | 1175-1191 | Disease | denotes | viral infections | http://purl.obolibrary.org/obo/MONDO_0005108 |
T189 | 1239-1245 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T374 | 196-199 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T375 | 379-385 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | hearts |
T376 | 379-385 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | hearts |
T377 | 379-385 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | hearts |
T378 | 379-385 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | hearts |
T379 | 546-551 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T380 | 597-602 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | heart |
T381 | 597-602 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | heart |
T382 | 597-602 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | heart |
T383 | 597-602 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | heart |
T384 | 671-677 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | Kidney |
T385 | 671-677 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | Kidney |
T386 | 671-677 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | Kidney |
T387 | 685-688 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T388 | 787-793 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T389 | 787-793 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T390 | 787-793 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T391 | 980-985 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T392 | 980-985 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T393 | 989-995 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T394 | 989-995 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T395 | 989-995 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T396 | 1047-1048 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T397 | 1233-1238 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T398 | 1233-1238 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T399 | 1272-1273 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T400 | 1310-1312 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
645 | 423-431 | Species | denotes | patients | Tax:9606 |
646 | 729-737 | Species | denotes | patients | Tax:9606 |
647 | 797-805 | Species | denotes | patients | Tax:9606 |
648 | 880-888 | Species | denotes | Patients | Tax:9606 |
649 | 1022-1032 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
650 | 93-101 | Disease | denotes | COVID-19 | MESH:C000657245 |
651 | 144-163 | Disease | denotes | Cardiac involvement | MESH:D006331 |
652 | 174-182 | Disease | denotes | COVID-19 | MESH:C000657245 |
653 | 303-312 | Disease | denotes | mortality | MESH:D003643 |
654 | 516-528 | Disease | denotes | pericarditis | MESH:D010493 |
655 | 647-669 | Disease | denotes | cardiovascular disease | MESH:D002318 |
656 | 671-684 | Disease | denotes | Kidney injury | MESH:D058186 |
657 | 720-728 | Disease | denotes | COVID-19 | MESH:C000657245 |
658 | 931-945 | Disease | denotes | hepatic injury | MESH:D056486 |
659 | 989-1002 | Disease | denotes | kidney damage | MESH:D007674 |
660 | 1175-1191 | Disease | denotes | viral infections | MESH:D001102 |
661 | 1233-1245 | Disease | denotes | liver injury | MESH:D017093 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T82 | 516-528 | Phenotype | denotes | pericarditis | http://purl.obolibrary.org/obo/HP_0001701 |
T83 | 647-669 | Phenotype | denotes | cardiovascular disease | http://purl.obolibrary.org/obo/HP_0001626 |
T84 | 989-1002 | Phenotype | denotes | kidney damage | http://purl.obolibrary.org/obo/HP_0000112 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T39 | 183-195 | http://purl.obolibrary.org/obo/GO_0009405 | denotes | pathogenesis |
T40 | 1109-1130 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammatory response |
T41 | 1175-1191 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infections |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T280 | 0-143 | Sentence | denotes | Several publications have shown an association of the severity of the clinical expression of COVID-19 with the number of comorbidities present. |
T281 | 144-318 | Sentence | denotes | Cardiac involvement in severe COVID-19 pathogenesis has been well documented [23], and cardiac risk factors have been identified as risk factors for increased mortality [24]. |
T282 | 319-463 | Sentence | denotes | In our study of the macroscopic and microscopic features of hearts we found several differences between patients with and without comorbidities. |
T283 | 464-670 | Sentence | denotes | The 4 cases without comorbidities showed pronounced pericarditis and inflammatory cells infiltrating adventitia, indicating that the heart can be compromised irrespective of previous cardiovascular disease. |
T284 | 671-743 | Sentence | denotes | Kidney injury has been reported in nearly 30% of COVID-19 patients [25]. |
T285 | 744-879 | Sentence | denotes | We found that histopathological changes in kidney in patients without comorbidities appeared more severe that those with comorbidities. |
T286 | 880-946 | Sentence | denotes | Patients without comorbidities also showed greater hepatic injury. |
T287 | 947-1157 | Sentence | denotes | Whether these findings represent liver or kidney damage caused directly by SARS-CoV-2 itself or are a reflection of the consequences of an abnormal and excessive inflammatory response, requires definition [26]. |
T288 | 1158-1314 | Sentence | denotes | Studies of other viral infections of the respiratory tract have shown that liver injury may be immune mediated or a result of direct cytopathic damage [27]. |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32914853-32125455-61098666 | 222-224 | 32125455 | denotes | 23 |
32914853-32306491-61098667 | 314-316 | 32306491 | denotes | 24 |
32914853-32170806-61098668 | 1153-1155 | 32170806 | denotes | 26 |
32914853-32274342-61098669 | 1310-1312 | 32274342 | denotes | 27 |