
PMC:7543426 / 23093-23679
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T246 | 4-8 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T247 | 80-84 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T248 | 85-92 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
T249 | 276-285 | Body_part | denotes | cytoplasm | http://purl.org/sig/ont/fma/fma66835 |
T250 | 297-308 | Body_part | denotes | pneumocytes | http://purl.org/sig/ont/fma/fma62499 |
T251 | 426-435 | Body_part | denotes | capillary | http://purl.org/sig/ont/fma/fma63194 |
T252 | 489-502 | Body_part | denotes | T lymphocytes | http://purl.org/sig/ont/fma/fma62870 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T126 | 4-8 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T127 | 80-84 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T128 | 426-435 | Body_part | denotes | capillary | http://purl.obolibrary.org/obo/UBERON_0001982 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T167 | 328-343 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
T168 | 334-343 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T169 | 412-421 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
T170 | 468-476 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T171 | 544-554 | Disease | denotes | vasculitis | http://purl.obolibrary.org/obo/MONDO_0018882 |
T172 | 573-585 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T349 | 4-8 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T350 | 4-8 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T351 | 58-59 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T352 | 80-84 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T353 | 80-84 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T354 | 119-124 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | males |
T355 | 119-124 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | males |
T356 | 131-137 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | female |
T357 | 345-347 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
T358 | 465-467 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
600 | 138-146 | Species | denotes | patients | Tax:9606 |
601 | 328-343 | Disease | denotes | viral infection | MESH:D001102 |
602 | 412-421 | Disease | denotes | pneumonia | MESH:D011014 |
603 | 468-476 | Disease | denotes | COVID-19 | MESH:C000657245 |
604 | 544-554 | Disease | denotes | vasculitis | MESH:D014657 |
605 | 573-585 | Disease | denotes | inflammation | MESH:D007249 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T78 | 412-421 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
T79 | 544-554 | Phenotype | denotes | vasculitis | http://purl.obolibrary.org/obo/HP_0002633 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T32 | 328-343 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
T33 | 573-585 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T270 | 0-199 | Sentence | denotes | Our lung pathology findings were similar to those seen in a study of postmortem lung tissues from northern Italy of 33 males and 5 female patients, with an average age of 69 years (range 32–86) [17]. |
T271 | 200-349 | Sentence | denotes | In addition, using electron microscopy we identified viral particles in the cytoplasm of type II pneumocytes—the main target of viral infection [18]. |
T272 | 350-586 | Sentence | denotes | Interestingly, all the histological hallmarks of interstitial pneumonia and capillary damage were prominent in all 22 COVID-19 cases, with T lymphocytes being prominent in vascular infiltrates (vasculitis) and interstitial inflammation. |