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PMC:7543426 / 18521-19190 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T174 25-30 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T175 35-41 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T176 43-45 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T177 47-52 Body_part denotes Liver http://purl.org/sig/ont/fma/fma7197
T178 53-59 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T179 66-76 Body_part denotes sinusoidal http://purl.org/sig/ont/fma/fma63131
T180 109-124 Body_part denotes red blood cells http://purl.org/sig/ont/fma/fma62845
T181 119-124 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T182 134-148 Body_part denotes space of Disse http://purl.org/sig/ont/fma/fma63162
T183 171-175 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723
T184 188-190 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T185 214-216 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599
T186 277-279 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T187 281-283 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T188 379-385 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T189 386-414 Body_part denotes glomerular endothelial cells http://purl.org/sig/ont/fma/fma70970
T190 409-414 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T191 474-488 Body_part denotes Bowman capsule http://purl.org/sig/ont/fma/fma15626
T192 481-488 Body_part denotes capsule http://purl.org/sig/ont/fma/fma85272
T193 626-628 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T92 25-30 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T93 35-41 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T94 47-52 Body_part denotes Liver http://purl.obolibrary.org/obo/UBERON_0002107
T95 53-59 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T96 113-118 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T97 171-175 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638
T98 379-385 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T99 481-488 Body_part denotes capsule http://purl.obolibrary.org/obo/UBERON_0003893
T100 614-619 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T141 513-525 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T142 535-555 Disease denotes glomerular sclerosis http://purl.obolibrary.org/obo/MONDO_0000490

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T275 25-30 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T276 25-30 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T277 35-41 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T278 35-41 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T279 35-41 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T280 47-52 http://purl.obolibrary.org/obo/UBERON_0002107 denotes Liver
T281 47-52 http://www.ebi.ac.uk/efo/EFO_0000887 denotes Liver
T282 109-124 http://purl.obolibrary.org/obo/CL_0000232 denotes red blood cells
T283 171-175 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T284 171-175 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein
T285 188-190 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T286 214-216 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T287 281-283 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T288 379-385 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T289 379-385 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T290 379-385 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T291 397-414 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T292 490-492 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3
T293 637-639 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
488 585-588 Chemical denotes H&E
489 590-602 Chemical denotes haematoxylin MESH:D006416
490 607-612 Chemical denotes eosin MESH:D004801
491 196-212 Disease denotes hepatic necrosis MESH:D056486
492 311-334 Disease denotes microvacuolar steatosis MESH:D005234
493 379-396 Disease denotes Kidney glomerular MESH:D007674
494 513-525 Disease denotes inflammation MESH:D007249
495 535-555 Disease denotes glomerular sclerosis MESH:D007674

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T65 196-212 Phenotype denotes hepatic necrosis http://purl.obolibrary.org/obo/HP_0002605
T66 325-334 Phenotype denotes steatosis http://purl.obolibrary.org/obo/HP_0001397
T67 535-555 Phenotype denotes glomerular sclerosis http://purl.obolibrary.org/obo/HP_0000096

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T25 204-212 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T26 204-212 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T27 204-212 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T28 204-212 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T29 513-525 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T224 0-42 Sentence denotes Pathological findings in liver and kidney.
T225 43-149 Sentence denotes A1, Liver tissue shows sinusoidal congestion and extravasation of red blood cells into the space of Disse.
T226 150-232 Sentence denotes In some cases, small vein congestion (A2) and hepatic necrosis (A3) were reported.
T227 233-276 Sentence denotes A4, Inflammatory infiltration was observed.
T228 277-374 Sentence denotes A1, A2, and A4, Macrovacuolar and microvacuolar steatosis were observed in the majority of cases.
T229 375-428 Sentence denotes B1, Kidney glomerular endothelial cells were swollen.
T230 429-489 Sentence denotes B2, Fibrin deposit is visible underneath the Bowman capsule.
T231 490-570 Sentence denotes B3, Tubulointerstitial inflammation and (B4) glomerular sclerosis were observed.
T232 571-613 Sentence denotes Abbreviation: H&E, haematoxylin and eosin.
T233 614-669 Sentence denotes Scale bars: A1–A4, and B3, 50 µm; B1, B2, and B4, 14 µm