PMC:7543426 / 18521-19190
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T174 | 25-30 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
T175 | 35-41 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
T176 | 43-45 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T177 | 47-52 | Body_part | denotes | Liver | http://purl.org/sig/ont/fma/fma7197 |
T178 | 53-59 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T179 | 66-76 | Body_part | denotes | sinusoidal | http://purl.org/sig/ont/fma/fma63131 |
T180 | 109-124 | Body_part | denotes | red blood cells | http://purl.org/sig/ont/fma/fma62845 |
T181 | 119-124 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T182 | 134-148 | Body_part | denotes | space of Disse | http://purl.org/sig/ont/fma/fma63162 |
T183 | 171-175 | Body_part | denotes | vein | http://purl.org/sig/ont/fma/fma50723 |
T184 | 188-190 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T185 | 214-216 | Body_part | denotes | A3 | http://purl.org/sig/ont/fma/fma66599 |
T186 | 277-279 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
T187 | 281-283 | Body_part | denotes | A2 | http://purl.org/sig/ont/fma/fma66595 |
T188 | 379-385 | Body_part | denotes | Kidney | http://purl.org/sig/ont/fma/fma7203 |
T189 | 386-414 | Body_part | denotes | glomerular endothelial cells | http://purl.org/sig/ont/fma/fma70970 |
T190 | 409-414 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T191 | 474-488 | Body_part | denotes | Bowman capsule | http://purl.org/sig/ont/fma/fma15626 |
T192 | 481-488 | Body_part | denotes | capsule | http://purl.org/sig/ont/fma/fma85272 |
T193 | 626-628 | Body_part | denotes | A1 | http://purl.org/sig/ont/fma/fma66592 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T92 | 25-30 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T93 | 35-41 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T94 | 47-52 | Body_part | denotes | Liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
T95 | 53-59 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T96 | 113-118 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T97 | 171-175 | Body_part | denotes | vein | http://purl.obolibrary.org/obo/UBERON_0001638 |
T98 | 379-385 | Body_part | denotes | Kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
T99 | 481-488 | Body_part | denotes | capsule | http://purl.obolibrary.org/obo/UBERON_0003893 |
T100 | 614-619 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T141 | 513-525 | Disease | denotes | inflammation | http://purl.obolibrary.org/obo/MONDO_0021166 |
T142 | 535-555 | Disease | denotes | glomerular sclerosis | http://purl.obolibrary.org/obo/MONDO_0000490 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T275 | 25-30 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
T276 | 25-30 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
T277 | 35-41 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
T278 | 35-41 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
T279 | 35-41 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
T280 | 47-52 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | Liver |
T281 | 47-52 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | Liver |
T282 | 109-124 | http://purl.obolibrary.org/obo/CL_0000232 | denotes | red blood cells |
T283 | 171-175 | http://purl.obolibrary.org/obo/UBERON_0001638 | denotes | vein |
T284 | 171-175 | http://www.ebi.ac.uk/efo/EFO_0000816 | denotes | vein |
T285 | 188-190 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T286 | 214-216 | http://purl.obolibrary.org/obo/CLO_0001577 | denotes | A3 |
T287 | 281-283 | http://purl.obolibrary.org/obo/CLO_0001562 | denotes | A2 |
T288 | 379-385 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | Kidney |
T289 | 379-385 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | Kidney |
T290 | 379-385 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | Kidney |
T291 | 397-414 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cells |
T292 | 490-492 | http://purl.obolibrary.org/obo/CLO_0001812 | denotes | B3 |
T293 | 637-639 | http://purl.obolibrary.org/obo/CLO_0001812 | denotes | B3 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
488 | 585-588 | Chemical | denotes | H&E | |
489 | 590-602 | Chemical | denotes | haematoxylin | MESH:D006416 |
490 | 607-612 | Chemical | denotes | eosin | MESH:D004801 |
491 | 196-212 | Disease | denotes | hepatic necrosis | MESH:D056486 |
492 | 311-334 | Disease | denotes | microvacuolar steatosis | MESH:D005234 |
493 | 379-396 | Disease | denotes | Kidney glomerular | MESH:D007674 |
494 | 513-525 | Disease | denotes | inflammation | MESH:D007249 |
495 | 535-555 | Disease | denotes | glomerular sclerosis | MESH:D007674 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T65 | 196-212 | Phenotype | denotes | hepatic necrosis | http://purl.obolibrary.org/obo/HP_0002605 |
T66 | 325-334 | Phenotype | denotes | steatosis | http://purl.obolibrary.org/obo/HP_0001397 |
T67 | 535-555 | Phenotype | denotes | glomerular sclerosis | http://purl.obolibrary.org/obo/HP_0000096 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T25 | 204-212 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
T26 | 204-212 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
T27 | 204-212 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
T28 | 204-212 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
T29 | 513-525 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T224 | 0-42 | Sentence | denotes | Pathological findings in liver and kidney. |
T225 | 43-149 | Sentence | denotes | A1, Liver tissue shows sinusoidal congestion and extravasation of red blood cells into the space of Disse. |
T226 | 150-232 | Sentence | denotes | In some cases, small vein congestion (A2) and hepatic necrosis (A3) were reported. |
T227 | 233-276 | Sentence | denotes | A4, Inflammatory infiltration was observed. |
T228 | 277-374 | Sentence | denotes | A1, A2, and A4, Macrovacuolar and microvacuolar steatosis were observed in the majority of cases. |
T229 | 375-428 | Sentence | denotes | B1, Kidney glomerular endothelial cells were swollen. |
T230 | 429-489 | Sentence | denotes | B2, Fibrin deposit is visible underneath the Bowman capsule. |
T231 | 490-570 | Sentence | denotes | B3, Tubulointerstitial inflammation and (B4) glomerular sclerosis were observed. |
T232 | 571-613 | Sentence | denotes | Abbreviation: H&E, haematoxylin and eosin. |
T233 | 614-669 | Sentence | denotes | Scale bars: A1–A4, and B3, 50 µm; B1, B2, and B4, 14 µm |