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PMC:7543426 / 18510-19190 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T174 36-41 Body_part denotes liver http://purl.org/sig/ont/fma/fma7197
T175 46-52 Body_part denotes kidney http://purl.org/sig/ont/fma/fma7203
T176 54-56 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T177 58-63 Body_part denotes Liver http://purl.org/sig/ont/fma/fma7197
T178 64-70 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T179 77-87 Body_part denotes sinusoidal http://purl.org/sig/ont/fma/fma63131
T180 120-135 Body_part denotes red blood cells http://purl.org/sig/ont/fma/fma62845
T181 130-135 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T182 145-159 Body_part denotes space of Disse http://purl.org/sig/ont/fma/fma63162
T183 182-186 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723
T184 199-201 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T185 225-227 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599
T186 288-290 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T187 292-294 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T188 390-396 Body_part denotes Kidney http://purl.org/sig/ont/fma/fma7203
T189 397-425 Body_part denotes glomerular endothelial cells http://purl.org/sig/ont/fma/fma70970
T190 420-425 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T191 485-499 Body_part denotes Bowman capsule http://purl.org/sig/ont/fma/fma15626
T192 492-499 Body_part denotes capsule http://purl.org/sig/ont/fma/fma85272
T193 637-639 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T92 36-41 Body_part denotes liver http://purl.obolibrary.org/obo/UBERON_0002107
T93 46-52 Body_part denotes kidney http://purl.obolibrary.org/obo/UBERON_0002113
T94 58-63 Body_part denotes Liver http://purl.obolibrary.org/obo/UBERON_0002107
T95 64-70 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T96 124-129 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T97 182-186 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638
T98 390-396 Body_part denotes Kidney http://purl.obolibrary.org/obo/UBERON_0002113
T99 492-499 Body_part denotes capsule http://purl.obolibrary.org/obo/UBERON_0003893
T100 625-630 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T141 524-536 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T142 546-566 Disease denotes glomerular sclerosis http://purl.obolibrary.org/obo/MONDO_0000490

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T275 36-41 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T276 36-41 http://www.ebi.ac.uk/efo/EFO_0000887 denotes liver
T277 46-52 http://purl.obolibrary.org/obo/UBERON_0002113 denotes kidney
T278 46-52 http://www.ebi.ac.uk/efo/EFO_0000927 denotes kidney
T279 46-52 http://www.ebi.ac.uk/efo/EFO_0000929 denotes kidney
T280 58-63 http://purl.obolibrary.org/obo/UBERON_0002107 denotes Liver
T281 58-63 http://www.ebi.ac.uk/efo/EFO_0000887 denotes Liver
T282 120-135 http://purl.obolibrary.org/obo/CL_0000232 denotes red blood cells
T283 182-186 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T284 182-186 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein
T285 199-201 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T286 225-227 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T287 292-294 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T288 390-396 http://purl.obolibrary.org/obo/UBERON_0002113 denotes Kidney
T289 390-396 http://www.ebi.ac.uk/efo/EFO_0000927 denotes Kidney
T290 390-396 http://www.ebi.ac.uk/efo/EFO_0000929 denotes Kidney
T291 408-425 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T292 501-503 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3
T293 648-650 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
488 596-599 Chemical denotes H&E
489 601-613 Chemical denotes haematoxylin MESH:D006416
490 618-623 Chemical denotes eosin MESH:D004801
491 207-223 Disease denotes hepatic necrosis MESH:D056486
492 322-345 Disease denotes microvacuolar steatosis MESH:D005234
493 390-407 Disease denotes Kidney glomerular MESH:D007674
494 524-536 Disease denotes inflammation MESH:D007249
495 546-566 Disease denotes glomerular sclerosis MESH:D007674

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T65 207-223 Phenotype denotes hepatic necrosis http://purl.obolibrary.org/obo/HP_0002605
T66 336-345 Phenotype denotes steatosis http://purl.obolibrary.org/obo/HP_0001397
T67 546-566 Phenotype denotes glomerular sclerosis http://purl.obolibrary.org/obo/HP_0000096

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T25 215-223 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T26 215-223 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T27 215-223 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T28 215-223 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T29 524-536 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T223 0-9 Sentence denotes Figure 5.
T224 11-53 Sentence denotes Pathological findings in liver and kidney.
T225 54-160 Sentence denotes A1, Liver tissue shows sinusoidal congestion and extravasation of red blood cells into the space of Disse.
T226 161-243 Sentence denotes In some cases, small vein congestion (A2) and hepatic necrosis (A3) were reported.
T227 244-287 Sentence denotes A4, Inflammatory infiltration was observed.
T228 288-385 Sentence denotes A1, A2, and A4, Macrovacuolar and microvacuolar steatosis were observed in the majority of cases.
T229 386-439 Sentence denotes B1, Kidney glomerular endothelial cells were swollen.
T230 440-500 Sentence denotes B2, Fibrin deposit is visible underneath the Bowman capsule.
T231 501-581 Sentence denotes B3, Tubulointerstitial inflammation and (B4) glomerular sclerosis were observed.
T232 582-624 Sentence denotes Abbreviation: H&E, haematoxylin and eosin.
T233 625-680 Sentence denotes Scale bars: A1–A4, and B3, 50 µm; B1, B2, and B4, 14 µm