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PMC:7543426 / 14930-15831 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T121 81-92 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T122 175-184 Body_part denotes chromatin http://purl.org/sig/ont/fma/fma67526
T123 192-203 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T124 257-284 Body_part denotes rough endoplasmic reticulum http://purl.org/sig/ont/fma/fma66898
T125 323-335 Body_part denotes compartments http://purl.org/sig/ont/fma/fma76577
T126 566-570 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T127 571-577 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T128 671-683 Body_part denotes compartments http://purl.org/sig/ont/fma/fma76577
T129 695-706 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T130 779-787 Body_part denotes vacuoles http://purl.org/sig/ont/fma/fma0326886

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T63 566-570 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T64 571-577 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T65 869-874 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T130 31-39 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T131 542-550 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T132 618-626 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T201 306-311 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T202 566-570 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T203 566-570 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T204 615-616 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T205 654-659 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T206 717-718 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T207 770-778 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T208 779-787 http://purl.obolibrary.org/obo/GO_0005773 denotes vacuoles
T209 881-882 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T210 890-891 http://purl.obolibrary.org/obo/CLO_0001021 denotes B

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
409 31-41 Species denotes SARS-CoV-2 Tax:2697049
412 542-552 Species denotes SARS-CoV-2 Tax:2697049
413 618-628 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T184 0-30 Sentence denotes Electron Microscopic Findings.
T185 31-185 Sentence denotes SARS-CoV-2 particles were detected within type II pneumocytes, which showed degenerating features characterized by fine and uniformly dispersed chromatin.
T186 186-296 Sentence denotes These pneumocytes displayed swollen mitochondrial profiles and dilated rough endoplasmic reticulum (Figure 3).
T187 297-410 Sentence denotes Numerous virus-containing compartments (VCC) of different sizes and shapes were detected (Figure 3A, 3B, and 3D).
T188 411-530 Sentence denotes Interestingly, spherules, very small vesicles containing single viral particles (Figure 3B and 3C), were also observed.
T189 531-540 Sentence denotes Figure 3.
T190 542-614 Sentence denotes SARS-CoV-2 detection in lung tissue by transmission electron microscopy.
T191 615-716 Sentence denotes A, SARS-CoV-2 particles are visible in virus-containing compartments in type II pneumocytes (arrows).
T192 717-796 Sentence denotes B–D, Numerous viral particles are enclosed in single-membrane vacuoles (arrow).
T193 797-868 Sentence denotes Other, very small vesicles contain single viral particles (arrowheads).
T194 869-901 Sentence denotes Scale bars: A, 1 µm; B–D, 200nm.