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PMC:7543426 / 13690-14928 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T95 33-37 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T96 169-173 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T97 174-181 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T98 231-236 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T99 255-263 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T100 329-340 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T101 364-369 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T102 481-492 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T103 588-596 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T104 607-615 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T105 695-699 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T106 700-706 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T107 708-710 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T108 757-761 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T109 762-768 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T110 803-808 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T111 825-833 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T112 841-843 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599
T113 885-896 Body_part denotes pneumocytes http://purl.org/sig/ont/fma/fma62499
T114 920-925 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T115 1045-1056 Body_part denotes lymphocytes http://purl.org/sig/ont/fma/fma62863
T116 1127-1135 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T117 1146-1154 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T118 1175-1177 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T119 1194-1196 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T120 1198-1200 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T57 169-173 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T58 695-699 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T59 700-706 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T60 757-761 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T61 762-768 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T62 1163-1168 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T181 31-37 http://purl.obolibrary.org/obo/CL_0000084 denotes T-cell
T182 38-48 http://purl.obolibrary.org/obo/CLO_0001658 denotes activation
T183 169-173 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T184 169-173 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T185 231-236 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T186 278-281 http://purl.obolibrary.org/obo/CLO_0001237 denotes 2A1
T187 364-369 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T188 551-554 http://purl.obolibrary.org/obo/CLO_0053997 denotes 2B1
T189 565-568 http://purl.obolibrary.org/obo/CLO_0052063 denotes 2B4
T190 565-568 http://purl.obolibrary.org/obo/CLO_0052458 denotes 2B4
T191 695-699 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T192 695-699 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T193 757-761 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T194 757-761 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T195 803-808 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T196 841-843 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T197 920-925 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T198 1194-1196 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T199 1198-1200 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T200 1228-1230 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
388 65-87 Gene denotes dipeptidyl peptidase-4 Gene:1803
389 89-93 Gene denotes DPP4 Gene:1803
390 127-131 Gene denotes CD26 Gene:1803
391 132-136 Gene denotes DPP4 Gene:1803
392 141-146 Gene denotes CXCR3 Gene:2833
393 147-152 Gene denotes CD183 Gene:2833
394 225-229 Gene denotes CD26 Gene:1803
395 453-458 Gene denotes CXCR3 Gene:2833
396 565-568 Gene denotes 2B4 Gene:51744
397 195-203 Species denotes patients Tax:9606
403 715-719 Gene denotes CD26 Gene:1803
404 720-742 Gene denotes dipeptidyl peptidase-4 Gene:1803
405 797-801 Gene denotes CD26 Gene:1803
406 992-997 Gene denotes CXCR3 Gene:2833
407 998-1003 Gene denotes CD183 Gene:2833

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T11 31-48 http://purl.obolibrary.org/obo/GO_0042110 denotes T-cell activation
T12 33-48 http://purl.obolibrary.org/obo/GO_0001775 denotes cell activation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T171 0-30 Sentence denotes Immunohistochemistry Findings.
T172 31-215 Sentence denotes T-cell activation is modulated by dipeptidyl peptidase-4 (DPP4) [16] and thus the expression of CD26/DPP4 and CXCR3/CD183 was analyzed on lung tissues from group 2 patients (Figure 2).
T173 216-354 Sentence denotes Numerous CD26+ cells were found in the alveolar septa (Figure 2A1–2A3) with intense staining seen in the type II pneumocytes (Figure 2A3).
T174 355-452 Sentence denotes Positive cells entrapped with fibrin clots in the vascular lumen were also observed (Figure 2A4).
T175 453-644 Sentence denotes CXCR3 immunostaining showed lymphocytes localized in inflammatory perivascular aggregates (Figure 2B1, 2B2, and 2B4) which spread into alveolar septa and alveolar spaces (Figure 2B2 and 2B3).
T176 645-654 Sentence denotes Figure 2.
T177 656-707 Sentence denotes Immunohistological characterization of lung tissue.
T178 708-769 Sentence denotes A1–A4, CD26/dipeptidyl peptidase-4 expression in lung tissue.
T179 770-840 Sentence denotes Numerous strongly positive CD26+ cells are seen in the alveolar septa.
T180 841-906 Sentence denotes A3, Intense staining is seen in the type II pneumocytes (arrows).
T181 907-984 Sentence denotes A4, Positive cells are also seen entrapped with fibrin in the vascular lumen.
T182 985-1162 Sentence denotes B1–B4, CXCR3/CD183 immunostaining shows intense staining of lymphocytes localized in the inflammatory perivascular aggregates and spread into alveolar septa and alveolar spaces.
T183 1163-1238 Sentence denotes Scale bars: A1 and B1, 100 µm; A2, A3, and B4, 7 µm; A4, B2, and B3, 14 µm.

2_test

Id Subject Object Predicate Lexical cue
32914853-26919392-61098657 96-98 26919392 denotes 16