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PMC:7543426 / 12550-13688 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T84 62-66 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T85 130-140 Body_part denotes pneumocyte http://purl.org/sig/ont/fma/fma62499
T86 162-170 Body_part denotes Alveolar http://purl.org/sig/ont/fma/fma264783
T87 196-204 Body_part denotes Alveolar http://purl.org/sig/ont/fma/fma264783
T88 287-292 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T89 322-330 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T90 463-468 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T91 984-992 Body_part denotes red pulp http://purl.org/sig/ont/fma/fma15844
T92 1054-1065 Body_part denotes Bone marrow http://purl.org/sig/ont/fma/fma9608
T93 1067-1081 Body_part denotes Megakaryocytes http://purl.org/sig/ont/fma/fma83555
T94 1108-1118 Body_part denotes Adipocytes http://purl.org/sig/ont/fma/fma63880

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T55 62-66 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T56 1054-1065 Body_part denotes Bone marrow http://purl.obolibrary.org/obo/UBERON_0002371

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T123 107-118 Disease denotes Hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T124 411-421 Disease denotes Vasculitis http://purl.obolibrary.org/obo/MONDO_0018882
T125 498-509 Disease denotes Myocarditis http://purl.obolibrary.org/obo/MONDO_0004496
T126 531-541 Disease denotes Vasculitis http://purl.obolibrary.org/obo/MONDO_0018882
T127 645-657 Disease denotes Pericarditis http://purl.obolibrary.org/obo/MONDO_0005904
T128 884-902 Disease denotes Glomerulosclerosis http://purl.obolibrary.org/obo/MONDO_0000490
T129 1082-1093 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T170 28-34 http://purl.obolibrary.org/obo/CLO_0007919 denotes n = 18
T171 28-34 http://purl.obolibrary.org/obo/CLO_0007920 denotes n = 18
T172 62-66 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T173 62-66 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T174 76-85 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T175 142-144 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T176 287-292 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T177 463-468 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T178 1035-1037 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T179 1054-1058 http://purl.obolibrary.org/obo/UBERON_0002481 denotes Bone
T180 1108-1118 http://purl.obolibrary.org/obo/CL_0000136 denotes Adipocytes

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
364 107-140 Disease denotes Hyperplasia of type II pneumocyte MESH:D006965
365 241-251 Disease denotes Hemorrhage MESH:D006470
366 322-337 Disease denotes alveolar damage MESH:D055370
367 411-421 Disease denotes Vasculitis MESH:D014657
368 498-509 Disease denotes Myocarditis MESH:D009205
369 531-541 Disease denotes Vasculitis MESH:D014657
370 615-623 Disease denotes necrosis MESH:D009336
371 645-657 Disease denotes Pericarditis MESH:D010493
372 687-695 Disease denotes fibrosis MESH:D005355
373 802-811 Disease denotes Steatosis MESH:D005234
374 884-902 Disease denotes Glomerulosclerosis MESH:D005921
375 937-945 Disease denotes fibrosis MESH:D005355
376 1014-1033 Disease denotes Lymphoid hypoplasia MESH:D008224
377 1082-1093 Disease denotes hyperplasia MESH:D006965

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T50 314-337 Phenotype denotes Diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T51 411-421 Phenotype denotes Vasculitis http://purl.obolibrary.org/obo/HP_0002633
T52 498-509 Phenotype denotes Myocarditis http://purl.obolibrary.org/obo/HP_0012819
T53 531-541 Phenotype denotes Vasculitis http://purl.obolibrary.org/obo/HP_0002633
T54 645-657 Phenotype denotes Pericarditis http://purl.obolibrary.org/obo/HP_0001701
T55 802-811 Phenotype denotes Steatosis http://purl.obolibrary.org/obo/HP_0001397
T56 884-902 Phenotype denotes Glomerulosclerosis http://purl.obolibrary.org/obo/HP_0000096

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T7 615-623 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T8 615-623 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T9 615-623 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T10 615-623 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T138 0-61 Sentence denotes Findings Group 1, No. (%) (n = 18) Group 2, No. (%) (n = 4)
T139 62-66 Sentence denotes Lung
T140 67-105 Sentence denotes  Hyaline membranes 8 (44.4) 2 (50.0)
T141 106-160 Sentence denotes  Hyperplasia of type II pneumocyte 11 (61.2) 4 (100)
T142 161-194 Sentence denotes  Alveolar plug 8 (44.4) 4 (100)
T143 195-239 Sentence denotes  Alveolar fibrin deposit 9 (50.0) 3 (75.0)
T144 240-272 Sentence denotes  Hemorrhage 10 (55.6) 2 (50.0)
T145 273-312 Sentence denotes  Inflammatory cells 13 (72.3) 4 (100)
T146 313-374 Sentence denotes  Diffuse alveolar damage, fibrotic phase 12 (66.7) 1 (25.0)
T147 375-409 Sentence denotes  Microthrombi 14 (77.8) 2 (50.0)
T148 410-440 Sentence denotes  Vasculitis 8 (44.4) 4 (100)
T149 441-488 Sentence denotes  Multinucleated giant cells 4 (22.3) 2 (50.0)
T150 489-496 Sentence denotes Cardiac
T151 497-529 Sentence denotes  Myocarditis 9 (50.0) 3 (75.0)
T152 530-561 Sentence denotes  Vasculitis 5 (27.8) 3 (75.0)
T153 562-607 Sentence denotes  Inflammatory infiltrate 13 (72.3) 3 (75.0)
T154 608-643 Sentence denotes  Focal necrosis 6 (33.4) 2 (50.0)
T155 644-676 Sentence denotes  Pericarditis 9 (50.0) 4 (100)
T156 677-715 Sentence denotes  Vascular fibrosis 4 (22.3) 2 (50.0)
T157 716-723 Sentence denotes Hepatic
T158 724-768 Sentence denotes  Inflammatory infiltrate 8 (44.4) 3 (75.0)
T159 769-800 Sentence denotes  Congestion 8 (44.4) 2 (50.0)
T160 801-831 Sentence denotes  Steatosis 9 (50.0) 3 (75.0)
T161 832-837 Sentence denotes Renal
T162 838-882 Sentence denotes  Inflammatory infiltrate 9 (50.0) 3 (75.0)
T163 883-922 Sentence denotes  Glomerulosclerosis 9 (50.0) 3 (75.0)
T164 923-964 Sentence denotes  Interstitial fibrosis 9 (50.0) 4 (100)
T165 965-972 Sentence denotes Splenic
T166 973-1012 Sentence denotes  Congested red pulp 15 (83.4) 4 (100)
T167 1013-1053 Sentence denotes  Lymphoid hypoplasia 11 (61.2) 4 (100)
T168 1054-1065 Sentence denotes Bone marrow
T169 1066-1106 Sentence denotes  Megakaryocytes hyperplasia 0 2 (50.0)
T170 1107-1138 Sentence denotes  Adipocytes 7 (38.9) 1 (25.0)