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PMC:7543426 / 12516-13688 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T84 96-100 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T85 164-174 Body_part denotes pneumocyte http://purl.org/sig/ont/fma/fma62499
T86 196-204 Body_part denotes Alveolar http://purl.org/sig/ont/fma/fma264783
T87 230-238 Body_part denotes Alveolar http://purl.org/sig/ont/fma/fma264783
T88 321-326 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T89 356-364 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T90 497-502 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T91 1018-1026 Body_part denotes red pulp http://purl.org/sig/ont/fma/fma15844
T92 1088-1099 Body_part denotes Bone marrow http://purl.org/sig/ont/fma/fma9608
T93 1101-1115 Body_part denotes Megakaryocytes http://purl.org/sig/ont/fma/fma83555
T94 1142-1152 Body_part denotes Adipocytes http://purl.org/sig/ont/fma/fma63880

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T55 96-100 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T56 1088-1099 Body_part denotes Bone marrow http://purl.obolibrary.org/obo/UBERON_0002371

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T123 141-152 Disease denotes Hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T124 445-455 Disease denotes Vasculitis http://purl.obolibrary.org/obo/MONDO_0018882
T125 532-543 Disease denotes Myocarditis http://purl.obolibrary.org/obo/MONDO_0004496
T126 565-575 Disease denotes Vasculitis http://purl.obolibrary.org/obo/MONDO_0018882
T127 679-691 Disease denotes Pericarditis http://purl.obolibrary.org/obo/MONDO_0005904
T128 918-936 Disease denotes Glomerulosclerosis http://purl.obolibrary.org/obo/MONDO_0000490
T129 1116-1127 Disease denotes hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T170 62-68 http://purl.obolibrary.org/obo/CLO_0007919 denotes n = 18
T171 62-68 http://purl.obolibrary.org/obo/CLO_0007920 denotes n = 18
T172 96-100 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T173 96-100 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T174 110-119 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T175 176-178 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T176 321-326 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T177 497-502 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T178 1069-1071 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T179 1088-1092 http://purl.obolibrary.org/obo/UBERON_0002481 denotes Bone
T180 1142-1152 http://purl.obolibrary.org/obo/CL_0000136 denotes Adipocytes

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
364 141-174 Disease denotes Hyperplasia of type II pneumocyte MESH:D006965
365 275-285 Disease denotes Hemorrhage MESH:D006470
366 356-371 Disease denotes alveolar damage MESH:D055370
367 445-455 Disease denotes Vasculitis MESH:D014657
368 532-543 Disease denotes Myocarditis MESH:D009205
369 565-575 Disease denotes Vasculitis MESH:D014657
370 649-657 Disease denotes necrosis MESH:D009336
371 679-691 Disease denotes Pericarditis MESH:D010493
372 721-729 Disease denotes fibrosis MESH:D005355
373 836-845 Disease denotes Steatosis MESH:D005234
374 918-936 Disease denotes Glomerulosclerosis MESH:D005921
375 971-979 Disease denotes fibrosis MESH:D005355
376 1048-1067 Disease denotes Lymphoid hypoplasia MESH:D008224
377 1116-1127 Disease denotes hyperplasia MESH:D006965

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T50 348-371 Phenotype denotes Diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T51 445-455 Phenotype denotes Vasculitis http://purl.obolibrary.org/obo/HP_0002633
T52 532-543 Phenotype denotes Myocarditis http://purl.obolibrary.org/obo/HP_0012819
T53 565-575 Phenotype denotes Vasculitis http://purl.obolibrary.org/obo/HP_0002633
T54 679-691 Phenotype denotes Pericarditis http://purl.obolibrary.org/obo/HP_0001701
T55 836-845 Phenotype denotes Steatosis http://purl.obolibrary.org/obo/HP_0001397
T56 918-936 Phenotype denotes Glomerulosclerosis http://purl.obolibrary.org/obo/HP_0000096

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T7 649-657 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T8 649-657 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T9 649-657 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T10 649-657 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T136 0-8 Sentence denotes Table 3.
T137 10-33 Sentence denotes Histopathology Findings
T138 34-95 Sentence denotes Findings Group 1, No. (%) (n = 18) Group 2, No. (%) (n = 4)
T139 96-100 Sentence denotes Lung
T140 101-139 Sentence denotes  Hyaline membranes 8 (44.4) 2 (50.0)
T141 140-194 Sentence denotes  Hyperplasia of type II pneumocyte 11 (61.2) 4 (100)
T142 195-228 Sentence denotes  Alveolar plug 8 (44.4) 4 (100)
T143 229-273 Sentence denotes  Alveolar fibrin deposit 9 (50.0) 3 (75.0)
T144 274-306 Sentence denotes  Hemorrhage 10 (55.6) 2 (50.0)
T145 307-346 Sentence denotes  Inflammatory cells 13 (72.3) 4 (100)
T146 347-408 Sentence denotes  Diffuse alveolar damage, fibrotic phase 12 (66.7) 1 (25.0)
T147 409-443 Sentence denotes  Microthrombi 14 (77.8) 2 (50.0)
T148 444-474 Sentence denotes  Vasculitis 8 (44.4) 4 (100)
T149 475-522 Sentence denotes  Multinucleated giant cells 4 (22.3) 2 (50.0)
T150 523-530 Sentence denotes Cardiac
T151 531-563 Sentence denotes  Myocarditis 9 (50.0) 3 (75.0)
T152 564-595 Sentence denotes  Vasculitis 5 (27.8) 3 (75.0)
T153 596-641 Sentence denotes  Inflammatory infiltrate 13 (72.3) 3 (75.0)
T154 642-677 Sentence denotes  Focal necrosis 6 (33.4) 2 (50.0)
T155 678-710 Sentence denotes  Pericarditis 9 (50.0) 4 (100)
T156 711-749 Sentence denotes  Vascular fibrosis 4 (22.3) 2 (50.0)
T157 750-757 Sentence denotes Hepatic
T158 758-802 Sentence denotes  Inflammatory infiltrate 8 (44.4) 3 (75.0)
T159 803-834 Sentence denotes  Congestion 8 (44.4) 2 (50.0)
T160 835-865 Sentence denotes  Steatosis 9 (50.0) 3 (75.0)
T161 866-871 Sentence denotes Renal
T162 872-916 Sentence denotes  Inflammatory infiltrate 9 (50.0) 3 (75.0)
T163 917-956 Sentence denotes  Glomerulosclerosis 9 (50.0) 3 (75.0)
T164 957-998 Sentence denotes  Interstitial fibrosis 9 (50.0) 4 (100)
T165 999-1006 Sentence denotes Splenic
T166 1007-1046 Sentence denotes  Congested red pulp 15 (83.4) 4 (100)
T167 1047-1087 Sentence denotes  Lymphoid hypoplasia 11 (61.2) 4 (100)
T168 1088-1099 Sentence denotes Bone marrow
T169 1100-1140 Sentence denotes  Megakaryocytes hyperplasia 0 2 (50.0)
T170 1141-1172 Sentence denotes  Adipocytes 7 (38.9) 1 (25.0)