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PMC:7543426 / 10302-11078 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T53 25-29 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T54 31-33 Body_part denotes A1 http://purl.org/sig/ont/fma/fma66592
T55 35-40 Body_part denotes Lungs http://purl.org/sig/ont/fma/fma68877
T56 111-113 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T57 118-120 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599
T58 287-295 Body_part denotes alveolar http://purl.org/sig/ont/fma/fma264783
T59 390-392 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599
T60 424-434 Body_part denotes pneumocyte http://purl.org/sig/ont/fma/fma62499
T61 465-474 Body_part denotes cytoplasm http://purl.org/sig/ont/fma/fma66835
T62 538-551 Body_part denotes Alveolar duct http://purl.org/sig/ont/fma/fma7341
T63 584-595 Body_part denotes capillaries http://purl.org/sig/ont/fma/fma63194
T64 742-744 Body_part denotes A2 http://purl.org/sig/ont/fma/fma66595
T65 753-755 Body_part denotes A3 http://purl.org/sig/ont/fma/fma66599

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T45 25-29 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T46 547-551 Body_part denotes duct http://purl.obolibrary.org/obo/UBERON_0000058
T47 627-633 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T48 730-735 Body_part denotes Scale http://purl.obolibrary.org/obo/UBERON_0002542

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T112 204-216 Disease denotes inflammation http://purl.obolibrary.org/obo/MONDO_0021166
T113 401-412 Disease denotes Hyperplasia http://purl.obolibrary.org/obo/MONDO_0005043
T114 610-616 Disease denotes injury http://purl.obolibrary.org/obo/MONDO_0021178
T115 634-644 Disease denotes vasculitis http://purl.obolibrary.org/obo/MONDO_0018882

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T131 35-40 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lungs
T129 25-29 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T130 25-29 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T132 111-113 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T133 118-120 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T134 238-247 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membranes
T135 264-265 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T136 390-392 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T137 547-551 http://purl.obolibrary.org/obo/UBERON_0000025 denotes duct
T138 547-551 http://purl.obolibrary.org/obo/UBERON_0000058 denotes duct
T139 597-599 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3
T140 627-633 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T141 742-744 http://purl.obolibrary.org/obo/CLO_0001562 denotes A2
T142 753-755 http://purl.obolibrary.org/obo/CLO_0001577 denotes A3
T143 756-758 http://purl.obolibrary.org/obo/CLO_0001812 denotes B3

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
303 701-704 Chemical denotes H&E
304 706-718 Chemical denotes haematoxylin MESH:D006416
305 723-728 Chemical denotes eosin MESH:D004801
306 155-184 Disease denotes parenchymal multifocal damage MESH:D002543
307 204-216 Disease denotes inflammation MESH:D007249
308 287-302 Disease denotes alveolar damage MESH:D055370
309 401-434 Disease denotes Hyperplasia of type II pneumocyte MESH:D006965
310 552-560 Disease denotes fibrosis MESH:D005355
311 573-580 Disease denotes thrombi MESH:D013927
312 601-616 Disease denotes Vascular injury MESH:D057772
313 627-644 Disease denotes vessel vasculitis MESH:D014657
314 649-663 Disease denotes vascular edema MESH:D004487
315 669-685 Disease denotes Pleural fibrosis MESH:D005355

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T43 279-302 Phenotype denotes diffuse alveolar damage http://purl.obolibrary.org/obo/HP_0033006
T44 634-644 Phenotype denotes vasculitis http://purl.obolibrary.org/obo/HP_0002633
T45 658-663 Phenotype denotes edema http://purl.obolibrary.org/obo/HP_0000969

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 204-216 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T115 0-30 Sentence denotes Pathological findings in lung.
T116 31-110 Sentence denotes A1, Lungs showed an increase in volume and were firmer and heavier than normal.
T117 111-303 Sentence denotes A2 and A3, Light microscopic analysis shows parenchymal multifocal damage with intraalveolar inflammation, fibrin, and hyaline membranes consistent with a diagnosis of diffuse alveolar damage.
T118 304-389 Sentence denotes Both acute exudative inflammatory process and fibrous proliferative phase were found.
T119 390-533 Sentence denotes A3 and A4, Hyperplasia of type II pneumocyte, characterized by amphophilic cytoplasm, large nuclei, and prominent nucleoli, are shown (arrows).
T120 534-561 Sentence denotes B1, Alveolar duct fibrosis.
T121 562-596 Sentence denotes B2, Fibrin thrombi in capillaries.
T122 597-664 Sentence denotes B3, Vascular injury including vessel vasculitis and vascular edema.
T123 665-686 Sentence denotes B4, Pleural fibrosis.
T124 687-729 Sentence denotes Abbreviation: H&E, haematoxylin and eosin.
T125 730-776 Sentence denotes Scale bars: A2, 14 µm; A3–B3, 7 µm; B4, 21 µm.