PMC:7543325 / 11021-11919 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T17","span":{"begin":181,"end":185},"obj":"Body_part"}],"attributes":[{"id":"A17","pred":"fma_id","subj":"T17","obj":"http://purl.org/sig/ont/fma/fma7195"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T18","span":{"begin":181,"end":185},"obj":"Body_part"}],"attributes":[{"id":"A18","pred":"uberon_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T86","span":{"begin":322,"end":328},"obj":"Disease"},{"id":"T87","span":{"begin":355,"end":368},"obj":"Disease"},{"id":"T88","span":{"begin":512,"end":531},"obj":"Disease"},{"id":"T89","span":{"begin":518,"end":531},"obj":"Disease"},{"id":"T90","span":{"begin":536,"end":548},"obj":"Disease"},{"id":"T91","span":{"begin":557,"end":576},"obj":"Disease"},{"id":"T92","span":{"begin":646,"end":652},"obj":"Disease"},{"id":"T93","span":{"begin":760,"end":768},"obj":"Disease"},{"id":"T94","span":{"begin":771,"end":780},"obj":"Disease"},{"id":"T95","span":{"begin":851,"end":859},"obj":"Disease"},{"id":"T96","span":{"begin":891,"end":897},"obj":"Disease"}],"attributes":[{"id":"A86","pred":"mondo_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A87","pred":"mondo_id","subj":"T87","obj":"http://purl.obolibrary.org/obo/MONDO_0004492"},{"id":"A88","pred":"mondo_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A89","pred":"mondo_id","subj":"T89","obj":"http://purl.obolibrary.org/obo/MONDO_0001106"},{"id":"A90","pred":"mondo_id","subj":"T90","obj":"http://purl.obolibrary.org/obo/MONDO_0002076"},{"id":"A91","pred":"mondo_id","subj":"T91","obj":"http://purl.obolibrary.org/obo/MONDO_0004981"},{"id":"A92","pred":"mondo_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/MONDO_0021178"},{"id":"A93","pred":"mondo_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A94","pred":"mondo_id","subj":"T94","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A95","pred":"mondo_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A96","pred":"mondo_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T96","span":{"begin":79,"end":81},"obj":"http://purl.obolibrary.org/obo/CLO_0053733"},{"id":"T97","span":{"begin":181,"end":185},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T98","span":{"begin":181,"end":185},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"LitCovid-PubTator","denotations":[{"id":"275","span":{"begin":416,"end":424},"obj":"Species"},{"id":"276","span":{"begin":474,"end":481},"obj":"Species"},{"id":"277","span":{"begin":621,"end":628},"obj":"Species"},{"id":"278","span":{"begin":786,"end":794},"obj":"Species"},{"id":"279","span":{"begin":313,"end":335},"obj":"Disease"},{"id":"280","span":{"begin":499,"end":507},"obj":"Disease"},{"id":"281","span":{"begin":512,"end":531},"obj":"Disease"},{"id":"282","span":{"begin":536,"end":548},"obj":"Disease"},{"id":"283","span":{"begin":557,"end":576},"obj":"Disease"},{"id":"284","span":{"begin":637,"end":652},"obj":"Disease"},{"id":"285","span":{"begin":668,"end":673},"obj":"Disease"},{"id":"286","span":{"begin":678,"end":699},"obj":"Disease"},{"id":"287","span":{"begin":765,"end":780},"obj":"Disease"},{"id":"288","span":{"begin":851,"end":859},"obj":"Disease"},{"id":"289","span":{"begin":891,"end":897},"obj":"Disease"}],"attributes":[{"id":"A275","pred":"tao:has_database_id","subj":"275","obj":"Tax:9606"},{"id":"A276","pred":"tao:has_database_id","subj":"276","obj":"Tax:9606"},{"id":"A277","pred":"tao:has_database_id","subj":"277","obj":"Tax:9606"},{"id":"A278","pred":"tao:has_database_id","subj":"278","obj":"Tax:9606"},{"id":"A279","pred":"tao:has_database_id","subj":"279","obj":"MESH:D013896"},{"id":"A280","pred":"tao:has_database_id","subj":"280","obj":"MESH:D006470"},{"id":"A281","pred":"tao:has_database_id","subj":"281","obj":"MESH:D058186"},{"id":"A282","pred":"tao:has_database_id","subj":"282","obj":"MESH:D011030"},{"id":"A283","pred":"tao:has_database_id","subj":"283","obj":"MESH:D001281"},{"id":"A284","pred":"tao:has_database_id","subj":"284","obj":"MESH:D013896"},{"id":"A285","pred":"tao:has_database_id","subj":"285","obj":"MESH:D005334"},{"id":"A286","pred":"tao:has_database_id","subj":"286","obj":"MESH:D017254"},{"id":"A287","pred":"tao:has_database_id","subj":"287","obj":"MESH:C000657245"},{"id":"A288","pred":"tao:has_database_id","subj":"288","obj":"MESH:C000657245"},{"id":"A289","pred":"tao:has_database_id","subj":"289","obj":"MESH:D009369"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T32","span":{"begin":512,"end":531},"obj":"Phenotype"},{"id":"T33","span":{"begin":536,"end":548},"obj":"Phenotype"},{"id":"T34","span":{"begin":557,"end":576},"obj":"Phenotype"},{"id":"T35","span":{"begin":668,"end":673},"obj":"Phenotype"},{"id":"T36","span":{"begin":678,"end":699},"obj":"Phenotype"},{"id":"T37","span":{"begin":771,"end":780},"obj":"Phenotype"},{"id":"T38","span":{"begin":891,"end":897},"obj":"Phenotype"}],"attributes":[{"id":"A32","pred":"hp_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/HP_0001919"},{"id":"A33","pred":"hp_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/HP_0002107"},{"id":"A34","pred":"hp_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/HP_0005110"},{"id":"A35","pred":"hp_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/HP_0001945"},{"id":"A36","pred":"hp_id","subj":"T36","obj":"http://purl.obolibrary.org/obo/HP_0002113"},{"id":"A37","pred":"hp_id","subj":"T37","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A38","pred":"hp_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/HP_0002664"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"LitCovid-sentences","denotations":[{"id":"T120","span":{"begin":0,"end":369},"obj":"Sentence"},{"id":"T121","span":{"begin":370,"end":411},"obj":"Sentence"},{"id":"T122","span":{"begin":412,"end":471},"obj":"Sentence"},{"id":"T123","span":{"begin":472,"end":616},"obj":"Sentence"},{"id":"T124","span":{"begin":617,"end":781},"obj":"Sentence"},{"id":"T125","span":{"begin":782,"end":829},"obj":"Sentence"},{"id":"T126","span":{"begin":830,"end":898},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}

{"project":"testtesttest","denotations":[{"id":"T23","span":{"begin":181,"end":185},"obj":"Body_part"}],"attributes":[{"id":"A23","pred":"uberon_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"}],"text":"The most frequent operations, described in Table 3, were anatomical lobectomy (11) and wedge segmentectomy (8); followed by mediastinoscopy (4), bullectomy (3), pleural biopsy (2), lung biopsy (2), extrapleural pneumonectomy (1), anatomical sublobar resection (1), and 2 emergency thoracotomies, 1 for control of thoracic trauma damage and another due to mediastinitis. The average length of stay was 4.72 days. The patients had the following postoperative complications: 1 patient had non-surgical bleeding; 1, acute renal failure; 1, pneumothorax; and 1, atrial fibrillation, all of which were resolved favourably. The patient who had thoracic trauma presented with fever and pulmonary infiltrates 7 days after the operation and was diagnosed with bilateral SARS-CoV-2 pneumonia. Two patients died within 30 days after surgery: 1 was diagnosed with COVID-19 and the other died of advanced cancer."}