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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 455-461 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T3 600-606 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T4 1832-1838 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T5 1909-1915 Body_part denotes Mental http://purl.org/sig/ont/fma/fma264279
T6 2082-2088 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T7 2257-2263 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T8 2823-2829 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T9 3549-3555 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T10 3798-3804 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T11 3886-3892 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T12 4183-4189 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T13 4287-4293 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T14 4659-4665 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 2823-2829 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T2 70-78 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 1440-1448 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 1476-1484 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 2159-2167 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 3904-3912 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 5935-5943 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T2 220-221 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 362-363 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 485-486 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 697-709 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organisation
T6 895-897 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T7 1011-1012 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 1867-1868 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1930-1934 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T10 2427-2428 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 2511-2514 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T12 2520-2521 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 2560-2561 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 3086-3089 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T15 3316-3317 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 3484-3485 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 3527-3528 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 3754-3755 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 3913-3916 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T20 4394-4400 http://purl.obolibrary.org/obo/UBERON_0001456 denotes facing
T21 4495-4498 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T22 4709-4710 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 5181-5182 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 5317-5330 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizations
T25 5550-5551 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 5715-5716 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T27 5983-5984 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 723-725 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
3 70-78 Disease denotes COVID‐19 MESH:C000657245
7 1440-1448 Disease denotes COVID‐19 MESH:C000657245
8 1476-1484 Disease denotes COVID‐19 MESH:C000657245
9 2159-2167 Disease denotes COVID‐19 MESH:C000657245
11 3138-3150 Species denotes participants Tax:9606
13 3452-3459 Disease denotes FORWARD
15 3904-3912 Disease denotes COVID‐19 MESH:C000657245
17 5935-5943 Disease denotes COVID‐19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 860-865 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T4 0-156 Sentence denotes The Science magazine recently reported an epidemic of publications on COVID‐19, with nearly 23 000 papers published in the last few months (Brainard, 2020).
T5 157-260 Sentence denotes However, this spate of publications should not be construed as a honeymoon period for medical research.
T6 261-429 Sentence denotes An editorial in the Nature Medicine elucidated the challenges for continuing research and sustaining a research career during these difficult times (Ghebreyesus, 2020).
T7 430-637 Sentence denotes I, being an early career mental health researcher from a developing country, would like to ponder on the ramifications of the pandemic on medical research in general and mental health research in particular.
T8 639-667 Sentence denotes 1 UNDERSTANDING THE CONTEXT
T9 668-1139 Sentence denotes The Secretary‐General of the Organisation for Economic Co‐operation and Development (OECD), Angel Gurría, writes “pandemic brings with it the third and greatest economic, financial and social shock of the 21st Century, after 9/11 and the Global Financial Crisis of 2008 (Gurría, 2020).” The United Nation's Development Program (UNDP) predicts a disproportionate impact of the economic crisis in the low and middle income countries with little access to social protection.
T10 1140-1271 Sentence denotes Not surprisingly, the national governments of these affected countries first would try to ensure basic food security and nutrition.
T11 1272-1471 Sentence denotes With the existing poor infrastructure and limited healthcare capacity, the available health budget is likely to be siphoned for upgrading clinical care and research in COVID‐19 (Walker et al., 2020).
T12 1472-1536 Sentence denotes Non‐COVID‐19 healthcare and research is starting to be hit hard.
T13 1537-1803 Sentence denotes Besides, there is evidence to suggest governments take austerity measures (reducing public expenditure) to deal with financial crises and, under such circumstances, healthcare and healthcare research are one of the worst affected areas (Simou & Koutsogeorgou, 2014).
T14 1804-1887 Sentence denotes Among the healthcare areas, mental healthcare and research get a very low priority.
T15 1888-2158 Sentence denotes According to the WHO Mental Health Atlas (2018), the national governments of the African, South‐East Asia and Manuscript File Western Pacific regions estimated to spend US$0.1‐1.1 per capita in mental health: this was 0.3% of the total development assistance for health.
T16 2159-2271 Sentence denotes COVID‐19 related economic crisis and health budget cut could tighten the purse string further for mental health.
T17 2273-2321 Sentence denotes 2 VULNERABILITIES OF AN EARLY CAREER RESEARCHER
T18 2322-2473 Sentence denotes Researchers, earlier in their career, encounter challenges ranging from lack of meaningful mentorship to a pressure to publish (Richards et al., 2019).
T19 2474-2744 Sentence denotes However, limited funding opportunity has been a more specific problem, experienced by a large majority of early career researchers (ECRs) from low and middle‐income countries, where senior scholars have preferential access to the available funds (Salihu Shinkafi, 2020).
T20 2745-2903 Sentence denotes The access to private funding, too, is restricted to non‐existent and the cut‐throat competition for international funding does not inspire confidence either.
T21 2904-2969 Sentence denotes During and after the pandemic, the situation is likely to worsen.
T22 2970-3006 Sentence denotes But funding is not the only concern.
T23 3007-3167 Sentence denotes Wet labs have been largely closed for indefinite periods and clinical research has been plagued with concerns of undue exposure to participants and researchers.
T24 3168-3263 Sentence denotes The scenario could be worse for countries with limited access to personal protective equipment.
T25 3264-3355 Sentence denotes The effects on the ECR and those aspiring to pursue a research career would be detrimental.
T26 3356-3439 Sentence denotes So, is there something, which could be done to prevent such an undesirable outcome?
T27 3441-3459 Sentence denotes 3 THE WAY FORWARD
T28 3460-3509 Sentence denotes I would like to suggest a multi‐pronged approach.
T29 3510-3563 Sentence denotes Firstly, we need a strong advocacy for mental health.
T30 3564-3709 Sentence denotes Advocacy could be more effective if the researchers joined in the efforts by their universities or relevant national and international societies.
T31 3710-3852 Sentence denotes The global economic crisis of 2008 revealed a significant effect of financial crisis on mental health across countries (Gunnell et al., 1998).
T32 3853-4008 Sentence denotes Besides, the association between mental health and COVID‐19 has also been established with reasonable degree of certainty (Galea, Merchant, & Lurie, 2020).
T33 4009-4197 Sentence denotes Advocacy measures, anchored on evidence and experience, at the local, regional, and at the global level must be undertaken to encourage the domestic governments to invest in mental health.
T34 4198-4339 Sentence denotes The national governments could also dedicate seed funds for pilot studies for ECRs, with mental health as one of the priority research areas.
T35 4340-4481 Sentence denotes Secondly, the ECRs with common research interests and facing similar challenges could collaborate and develop interest groups or consortiums.
T36 4482-4604 Sentence denotes The pandemic has unfolded an unlimited opportunity of virtual interactions and consequent opportunities for collaboration.
T37 4605-4787 Sentence denotes The international and national societies dedicated to mental health could provide the platform and play a significant role in helping ECRs to bring together by early career networks.
T38 4788-4885 Sentence denotes The WPA and World Association for Social Psychiatry already have networks of young psychiatrists.
T39 4886-5001 Sentence denotes We need more such networks of early career professionals in other sub‐specialties of psychiatry and across regions.
T40 5002-5112 Sentence denotes The Pacific Rim College of Psychiatrists (PRCP) could encourage greater professional collaboration among ECRs.
T41 5113-5277 Sentence denotes Finally, the senior and more experienced researchers might initiate a mentor‐mentee program across medical disciplines beyond their national or continental borders.
T42 5278-5377 Sentence denotes Again, the international societies and organizations could come forward for the mentorship program.
T43 5378-5494 Sentence denotes The senior researchers could ensure direct collaboration with the ECRs to foster the next generation of researchers.
T44 5495-5591 Sentence denotes This will be especially useful for ECR from LMIC, with a limited scope of worthwhile mentorship.
T45 5592-5714 Sentence denotes The feasibility and success of such endeavors were empirically validated (Merritt, Jack, Mangezi, Chibanda, & Abas, 2019).
T46 5715-5930 Sentence denotes A proactive, concerted, and empathic attitude of the national governments and senior researchers might actually be able to address some of the challenges encountered or likely to be encountered by the ECR from LMIC.
T47 5931-6084 Sentence denotes The COVID‐19 situation will subside eventually, but a collaborative partnership forged during these times would benefit the researchers in times to come.