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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 38-44 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T2 608-614 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T3 753-759 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T4 1985-1991 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T5 2062-2068 Body_part denotes Mental http://purl.org/sig/ont/fma/fma264279
T6 2235-2241 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T7 2410-2416 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T8 2976-2982 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738
T9 3702-3708 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T10 3951-3957 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T11 4039-4045 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T12 4336-4342 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T13 4440-4446 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279
T14 4812-4818 Body_part denotes mental http://purl.org/sig/ont/fma/fma264279

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 2976-2982 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 0-8 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 223-231 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 1593-1601 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 1629-1637 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T5 2312-2320 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 4057-4065 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 6088-6096 Disease denotes COVID‐19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 68-69 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 373-374 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 515-516 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 638-639 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 850-862 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organisation
T6 1048-1050 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T7 1164-1165 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 2020-2021 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 2083-2087 http://purl.obolibrary.org/obo/CLO_0001185 denotes 2018
T10 2580-2581 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 2664-2667 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T12 2673-2674 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 2713-2714 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 3239-3242 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T15 3469-3470 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T16 3637-3638 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T17 3680-3681 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T18 3907-3908 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T19 4066-4069 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T20 4547-4553 http://purl.obolibrary.org/obo/UBERON_0001456 denotes facing
T21 4648-4651 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T22 4862-4863 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T23 5334-5335 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 5470-5483 http://purl.obolibrary.org/obo/OBI_0000245 denotes organizations
T25 5703-5704 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 5868-5869 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T27 6136-6137 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 876-878 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 0-8 Disease denotes COVID‐19 MESH:C000657245
3 223-231 Disease denotes COVID‐19 MESH:C000657245
7 1593-1601 Disease denotes COVID‐19 MESH:C000657245
8 1629-1637 Disease denotes COVID‐19 MESH:C000657245
9 2312-2320 Disease denotes COVID‐19 MESH:C000657245
11 3291-3303 Species denotes participants Tax:9606
13 3605-3612 Disease denotes FORWARD
15 4057-4065 Disease denotes COVID‐19 MESH:C000657245
17 6088-6096 Disease denotes COVID‐19 MESH:C000657245

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 1013-1018 Phenotype denotes shock http://purl.obolibrary.org/obo/HP_0031273

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-100 Sentence denotes COVID‐19 pandemic and an early career mental health researcher from a low and middle income country:
T2 101-145 Sentence denotes Is there any light at the end of the tunnel?
T3 146-151 Sentence denotes Ghosh
T4 153-309 Sentence denotes The Science magazine recently reported an epidemic of publications on COVID‐19, with nearly 23 000 papers published in the last few months (Brainard, 2020).
T5 310-413 Sentence denotes However, this spate of publications should not be construed as a honeymoon period for medical research.
T6 414-582 Sentence denotes An editorial in the Nature Medicine elucidated the challenges for continuing research and sustaining a research career during these difficult times (Ghebreyesus, 2020).
T7 583-790 Sentence denotes I, being an early career mental health researcher from a developing country, would like to ponder on the ramifications of the pandemic on medical research in general and mental health research in particular.
T8 792-820 Sentence denotes 1 UNDERSTANDING THE CONTEXT
T9 821-1292 Sentence denotes The Secretary‐General of the Organisation for Economic Co‐operation and Development (OECD), Angel Gurría, writes “pandemic brings with it the third and greatest economic, financial and social shock of the 21st Century, after 9/11 and the Global Financial Crisis of 2008 (Gurría, 2020).” The United Nation's Development Program (UNDP) predicts a disproportionate impact of the economic crisis in the low and middle income countries with little access to social protection.
T10 1293-1424 Sentence denotes Not surprisingly, the national governments of these affected countries first would try to ensure basic food security and nutrition.
T11 1425-1624 Sentence denotes With the existing poor infrastructure and limited healthcare capacity, the available health budget is likely to be siphoned for upgrading clinical care and research in COVID‐19 (Walker et al., 2020).
T12 1625-1689 Sentence denotes Non‐COVID‐19 healthcare and research is starting to be hit hard.
T13 1690-1956 Sentence denotes Besides, there is evidence to suggest governments take austerity measures (reducing public expenditure) to deal with financial crises and, under such circumstances, healthcare and healthcare research are one of the worst affected areas (Simou & Koutsogeorgou, 2014).
T14 1957-2040 Sentence denotes Among the healthcare areas, mental healthcare and research get a very low priority.
T15 2041-2311 Sentence denotes According to the WHO Mental Health Atlas (2018), the national governments of the African, South‐East Asia and Manuscript File Western Pacific regions estimated to spend US$0.1‐1.1 per capita in mental health: this was 0.3% of the total development assistance for health.
T16 2312-2424 Sentence denotes COVID‐19 related economic crisis and health budget cut could tighten the purse string further for mental health.
T17 2426-2474 Sentence denotes 2 VULNERABILITIES OF AN EARLY CAREER RESEARCHER
T18 2475-2626 Sentence denotes Researchers, earlier in their career, encounter challenges ranging from lack of meaningful mentorship to a pressure to publish (Richards et al., 2019).
T19 2627-2897 Sentence denotes However, limited funding opportunity has been a more specific problem, experienced by a large majority of early career researchers (ECRs) from low and middle‐income countries, where senior scholars have preferential access to the available funds (Salihu Shinkafi, 2020).
T20 2898-3056 Sentence denotes The access to private funding, too, is restricted to non‐existent and the cut‐throat competition for international funding does not inspire confidence either.
T21 3057-3122 Sentence denotes During and after the pandemic, the situation is likely to worsen.
T22 3123-3159 Sentence denotes But funding is not the only concern.
T23 3160-3320 Sentence denotes Wet labs have been largely closed for indefinite periods and clinical research has been plagued with concerns of undue exposure to participants and researchers.
T24 3321-3416 Sentence denotes The scenario could be worse for countries with limited access to personal protective equipment.
T25 3417-3508 Sentence denotes The effects on the ECR and those aspiring to pursue a research career would be detrimental.
T26 3509-3592 Sentence denotes So, is there something, which could be done to prevent such an undesirable outcome?
T27 3594-3612 Sentence denotes 3 THE WAY FORWARD
T28 3613-3662 Sentence denotes I would like to suggest a multi‐pronged approach.
T29 3663-3716 Sentence denotes Firstly, we need a strong advocacy for mental health.
T30 3717-3862 Sentence denotes Advocacy could be more effective if the researchers joined in the efforts by their universities or relevant national and international societies.
T31 3863-4005 Sentence denotes The global economic crisis of 2008 revealed a significant effect of financial crisis on mental health across countries (Gunnell et al., 1998).
T32 4006-4161 Sentence denotes Besides, the association between mental health and COVID‐19 has also been established with reasonable degree of certainty (Galea, Merchant, & Lurie, 2020).
T33 4162-4350 Sentence denotes Advocacy measures, anchored on evidence and experience, at the local, regional, and at the global level must be undertaken to encourage the domestic governments to invest in mental health.
T34 4351-4492 Sentence denotes The national governments could also dedicate seed funds for pilot studies for ECRs, with mental health as one of the priority research areas.
T35 4493-4634 Sentence denotes Secondly, the ECRs with common research interests and facing similar challenges could collaborate and develop interest groups or consortiums.
T36 4635-4757 Sentence denotes The pandemic has unfolded an unlimited opportunity of virtual interactions and consequent opportunities for collaboration.
T37 4758-4940 Sentence denotes The international and national societies dedicated to mental health could provide the platform and play a significant role in helping ECRs to bring together by early career networks.
T38 4941-5038 Sentence denotes The WPA and World Association for Social Psychiatry already have networks of young psychiatrists.
T39 5039-5154 Sentence denotes We need more such networks of early career professionals in other sub‐specialties of psychiatry and across regions.
T40 5155-5265 Sentence denotes The Pacific Rim College of Psychiatrists (PRCP) could encourage greater professional collaboration among ECRs.
T41 5266-5430 Sentence denotes Finally, the senior and more experienced researchers might initiate a mentor‐mentee program across medical disciplines beyond their national or continental borders.
T42 5431-5530 Sentence denotes Again, the international societies and organizations could come forward for the mentorship program.
T43 5531-5647 Sentence denotes The senior researchers could ensure direct collaboration with the ECRs to foster the next generation of researchers.
T44 5648-5744 Sentence denotes This will be especially useful for ECR from LMIC, with a limited scope of worthwhile mentorship.
T45 5745-5867 Sentence denotes The feasibility and success of such endeavors were empirically validated (Merritt, Jack, Mangezi, Chibanda, & Abas, 2019).
T46 5868-6083 Sentence denotes A proactive, concerted, and empathic attitude of the national governments and senior researchers might actually be able to address some of the challenges encountered or likely to be encountered by the ECR from LMIC.
T47 6084-6237 Sentence denotes The COVID‐19 situation will subside eventually, but a collaborative partnership forged during these times would benefit the researchers in times to come.