PMC:7534795 / 3656-4044
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T72777 | 75-80 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T16084 | 110-128 | Body_part | denotes | organs and systems | http://purl.org/sig/ont/fma/fma7149 |
| T80150 | 144-151 | Body_part | denotes | kidneys | http://purl.org/sig/ont/fma/fma7203 |
| T68146 | 153-158 | Body_part | denotes | heart | http://purl.org/sig/ont/fma/fma7088 |
| T74654 | 160-173 | Body_part | denotes | blood vessels | http://purl.org/sig/ont/fma/fma63183 |
| T81920 | 160-165 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
| T8742 | 175-197 | Body_part | denotes | gastrointestinal tract | http://purl.org/sig/ont/fma/fma71132 |
| T68419 | 202-207 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
| T63124 | 351-374 | Body_part | denotes | lower respiratory tract | http://purl.org/sig/ont/fma/fma45662 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T5 | 110-116 | Body_part | denotes | organs | http://purl.obolibrary.org/obo/UBERON_0000062 |
| T6 | 153-173 | Body_part | denotes | heart, blood vessels | http://purl.obolibrary.org/obo/UBERON_0003498 |
| T7 | 153-158 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T8 | 160-165 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T9 | 166-173 | Body_part | denotes | vessels | http://purl.obolibrary.org/obo/UBERON_0000055 |
| T10 | 202-207 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
| T11 | 351-374 | Body_part | denotes | lower respiratory tract | http://purl.obolibrary.org/obo/UBERON_0001558 |
| T12 | 357-374 | Body_part | denotes | respiratory tract | http://purl.obolibrary.org/obo/UBERON_0000065 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T28 | 42-50 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T29 | 271-279 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T30 | 351-382 | Disease | denotes | lower respiratory tract disease | http://purl.obolibrary.org/obo/MONDO_0000270 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T54681 | 10-12 | http://purl.obolibrary.org/obo/CLO_0001022 | denotes | Li |
| T54688 | 10-12 | http://purl.obolibrary.org/obo/CLO_0007314 | denotes | Li |
| T28843 | 75-80 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T98322 | 110-128 | http://purl.obolibrary.org/obo/UBERON_0000467 | denotes | organs and systems |
| T76276 | 144-151 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidneys |
| T59650 | 144-151 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidneys |
| T46669 | 144-151 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidneys |
| T10398 | 153-158 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | heart |
| T37309 | 153-158 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | heart |
| T60359 | 153-158 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | heart |
| T83927 | 153-158 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | heart |
| T95767 | 160-173 | http://purl.obolibrary.org/obo/UBERON_0001981 | denotes | blood vessels |
| T43385 | 160-173 | http://www.ebi.ac.uk/efo/EFO_0000817 | denotes | blood vessels |
| T54345 | 175-197 | http://purl.obolibrary.org/obo/UBERON_0005409 | denotes | gastrointestinal tract |
| T58218 | 202-207 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
| T72303 | 202-207 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
| T28712 | 351-374 | http://purl.obolibrary.org/obo/UBERON_0001558 | denotes | lower respiratory tract |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T30 | 10-12 | Chemical | denotes | Li | http://purl.obolibrary.org/obo/CHEBI_30145 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T20 | 28-258 | Sentence | denotes | Consistently, SARS-CoV-2 primarily targets the lungs but it can affect many other organs and systems, including the kidneys, heart, blood vessels, gastrointestinal tract and brain (Wadman, Couzin-Frankel, Kaiser, & Matacic, 2020). |
| T21 | 259-383 | Sentence | denotes | Symptoms of COVID-19 are manifested as myalgia, fatigue, fever and dry cough, together with lower respiratory tract disease. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T6 | 298-305 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T7 | 307-314 | Phenotype | denotes | fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T8 | 316-321 | Phenotype | denotes | fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T9 | 326-335 | Phenotype | denotes | dry cough | http://purl.obolibrary.org/obo/HP_0031246 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 33031856-30531947-84038795 | 21-25 | 30531947 | denotes | 2019 |
| 33031856-32327580-84038796 | 252-256 | 32327580 | denotes | 2020 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 230 | 42-52 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 231 | 271-279 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 232 | 298-305 | Disease | denotes | myalgia | MESH:D063806 |
| 233 | 307-314 | Disease | denotes | fatigue | MESH:D005221 |
| 234 | 316-321 | Disease | denotes | fever | MESH:D005334 |
| 235 | 326-335 | Disease | denotes | dry cough | MESH:D003371 |
| 236 | 357-382 | Disease | denotes | respiratory tract disease | MESH:D012140 |