PMC:7534206 / 7649-9296
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T9 | 138-143 | Body_part | denotes | heart | http://purl.org/sig/ont/fma/fma7088 |
| T10 | 170-174 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T11 | 200-206 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T12 | 232-237 | Body_part | denotes | liver | http://purl.org/sig/ont/fma/fma7197 |
| T13 | 789-815 | Body_part | denotes | anterior choroidal artery | http://purl.org/sig/ont/fma/fma50087 |
| T14 | 1039-1044 | Body_part | denotes | groin | http://purl.org/sig/ont/fma/fma24040 |
| T15 | 1555-1568 | Body_part | denotes | Interleukin-6 | http://purl.org/sig/ont/fma/fma264829 |
| T16 | 1555-1566 | Body_part | denotes | Interleukin | http://purl.org/sig/ont/fma/fma86578 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T18 | 138-143 | Body_part | denotes | heart | http://purl.obolibrary.org/obo/UBERON_0000948 |
| T19 | 170-174 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T20 | 200-206 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
| T21 | 232-237 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T22 | 789-815 | Body_part | denotes | anterior choroidal artery | http://purl.obolibrary.org/obo/UBERON_0014696 |
| T23 | 809-815 | Body_part | denotes | artery | http://purl.obolibrary.org/obo/UBERON_0001637 |
| T24 | 900-907 | Body_part | denotes | vessels | http://purl.obolibrary.org/obo/UBERON_0000055 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T87 | 106-118 | Disease | denotes | Hypertension | http://purl.obolibrary.org/obo/MONDO_0005044 |
| T88 | 138-151 | Disease | denotes | heart disease | http://purl.obolibrary.org/obo/MONDO_0005267 |
| T89 | 170-182 | Disease | denotes | lung disease | http://purl.obolibrary.org/obo/MONDO_0005275 |
| T90 | 192-214 | Disease | denotes | Chronic kidney disease | http://purl.obolibrary.org/obo/MONDO_0005300 |
| T91 | 200-214 | Disease | denotes | kidney disease | http://purl.obolibrary.org/obo/MONDO_0001343|http://purl.obolibrary.org/obo/MONDO_0005240 |
| T93 | 232-245 | Disease | denotes | liver disease | http://purl.obolibrary.org/obo/MONDO_0005154 |
| T94 | 255-272 | Disease | denotes | Diabetes mellitus | http://purl.obolibrary.org/obo/MONDO_0005015 |
| T95 | 282-301 | Disease | denotes | Atrial fibrillation | http://purl.obolibrary.org/obo/MONDO_0004981 |
| T96 | 339-347 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T97 | 414-422 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T98 | 451-459 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T99 | 548-557 | Disease | denotes | Pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T100 | 603-609 | Disease | denotes | stroke | http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057 |
| T102 | 629-635 | Disease | denotes | stroke | http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057 |
| T104 | 658-664 | Disease | denotes | stroke | http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057 |
| T106 | 727-730 | Disease | denotes | HH3 | http://purl.obolibrary.org/obo/MONDO_0009482 |
| T107 | 768-771 | Disease | denotes | HH4 | http://purl.obolibrary.org/obo/MONDO_0012528 |
| T108 | 825-828 | Disease | denotes | HH1 | http://purl.obolibrary.org/obo/MONDO_0010635 |
| T109 | 854-860 | Disease | denotes | stroke | http://purl.obolibrary.org/obo/MONDO_0005098|http://purl.obolibrary.org/obo/MONDO_0011057 |
| T111 | 985-988 | Disease | denotes | CVT | http://purl.obolibrary.org/obo/MONDO_0008652 |
| T112 | 1407-1432 | Disease | denotes | intracerebral hemorrhage | http://purl.obolibrary.org/obo/MONDO_0013792 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T67 | 67-73 | http://purl.obolibrary.org/obo/UBERON_0003100 | denotes | Female |
| T68 | 138-143 | http://purl.obolibrary.org/obo/UBERON_0000948 | denotes | heart |
| T69 | 138-143 | http://purl.obolibrary.org/obo/UBERON_0007100 | denotes | heart |
| T70 | 138-143 | http://purl.obolibrary.org/obo/UBERON_0015228 | denotes | heart |
| T71 | 138-143 | http://www.ebi.ac.uk/efo/EFO_0000815 | denotes | heart |
| T72 | 170-174 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T73 | 170-174 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T74 | 200-206 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T75 | 200-206 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T76 | 200-206 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T77 | 232-237 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T78 | 232-237 | http://www.ebi.ac.uk/efo/EFO_0000887 | denotes | liver |
| T79 | 520-522 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T80 | 537-539 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T81 | 809-815 | http://purl.obolibrary.org/obo/UBERON_0001637 | denotes | artery |
| T82 | 809-815 | http://www.ebi.ac.uk/efo/EFO_0000814 | denotes | artery |
| T83 | 900-907 | http://purl.obolibrary.org/obo/UBERON_0000055 | denotes | vessels |
| T84 | 935-940 | http://purl.obolibrary.org/obo/CLO_0007438 | denotes | M1 11 |
| T85 | 1039-1044 | http://www.ebi.ac.uk/efo/EFO_0001397 | denotes | groin |
| T86 | 1555-1568 | http://purl.obolibrary.org/obo/PR_000001393 | denotes | Interleukin-6 |
| T87 | 1570-1572 | http://purl.obolibrary.org/obo/CLO_0008426 | denotes | pg |
| T88 | 1616-1619 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 3–6 |
| T89 | 1620-1622 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T7 | 920-923 | Chemical | denotes | ICA | http://purl.obolibrary.org/obo/CHEBI_29202 |
| T8 | 935-937 | Chemical | denotes | M1 | http://purl.obolibrary.org/obo/CHEBI_51079|http://purl.obolibrary.org/obo/CHEBI_139019|http://purl.obolibrary.org/obo/CHEBI_140152|http://purl.obolibrary.org/obo/CHEBI_34826 |
| T12 | 950-952 | Chemical | denotes | M2 | http://purl.obolibrary.org/obo/CHEBI_34827|http://purl.obolibrary.org/obo/CHEBI_51112 |
| T14 | 1153-1155 | Chemical | denotes | MT | http://purl.obolibrary.org/obo/CHEBI_73614 |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T31 | 106-118 | Phenotype | denotes | Hypertension | http://purl.obolibrary.org/obo/HP_0000822 |
| T32 | 162-182 | Phenotype | denotes | Chronic lung disease | http://purl.obolibrary.org/obo/HP_0006528 |
| T33 | 192-214 | Phenotype | denotes | Chronic kidney disease | http://purl.obolibrary.org/obo/HP_0012622 |
| T34 | 232-245 | Phenotype | denotes | liver disease | http://purl.obolibrary.org/obo/HP_0001392 |
| T35 | 255-272 | Phenotype | denotes | Diabetes mellitus | http://purl.obolibrary.org/obo/HP_0000819 |
| T36 | 282-301 | Phenotype | denotes | Atrial fibrillation | http://purl.obolibrary.org/obo/HP_0005110 |
| T37 | 514-519 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T38 | 531-536 | Phenotype | denotes | Cough | http://purl.obolibrary.org/obo/HP_0012735 |
| T39 | 548-557 | Phenotype | denotes | Pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T40 | 591-609 | Phenotype | denotes | Hemorrhagic stroke | http://purl.obolibrary.org/obo/HP_0001342 |
| T41 | 620-635 | Phenotype | denotes | Ischemic stroke | http://purl.obolibrary.org/obo/HP_0002140 |
| T42 | 646-664 | Phenotype | denotes | Hemorrhagic stroke | http://purl.obolibrary.org/obo/HP_0001342 |
| T43 | 713-717 | Phenotype | denotes | PICA | http://purl.obolibrary.org/obo/HP_0011856 |
| T44 | 718-726 | Phenotype | denotes | aneurysm | http://purl.obolibrary.org/obo/HP_0002617 |
| T45 | 759-767 | Phenotype | denotes | aneurysm | http://purl.obolibrary.org/obo/HP_0002617 |
| T46 | 816-824 | Phenotype | denotes | aneurysm | http://purl.obolibrary.org/obo/HP_0002617 |
| T47 | 845-860 | Phenotype | denotes | Ischemic stroke | http://purl.obolibrary.org/obo/HP_0002140 |
| T48 | 1177-1187 | Phenotype | denotes | aspiration | http://purl.obolibrary.org/obo/HP_0002835 |
| T49 | 1236-1246 | Phenotype | denotes | aspiration | http://purl.obolibrary.org/obo/HP_0002835 |
| T50 | 1407-1432 | Phenotype | denotes | intracerebral hemorrhage | http://purl.obolibrary.org/obo/HP_0001342 |
LitCovid-PD-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
|---|---|---|---|---|---|
| T1 | 727-730 | GlycoEpitope | denotes | HH3 | http://www.glycoepitope.jp/epitopes/AN0605 |
| T2 | 768-771 | GlycoEpitope | denotes | HH4 | http://www.glycoepitope.jp/epitopes/AN0607 |
| T3 | 825-828 | GlycoEpitope | denotes | HH1 | http://www.glycoepitope.jp/epitopes/AN0604 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T61 | 0-42 | Sentence | denotes | Variables Mean ± standard deviation; N (%) |
| T62 | 43-66 | Sentence | denotes | Age (years) 59.5 ± 16.0 |
| T63 | 67-90 | Sentence | denotes | Female gender 12 (55.5) |
| T64 | 91-104 | Sentence | denotes | Comorbidities |
| T65 | 105-128 | Sentence | denotes | Hypertension 10 (45.0) |
| T66 | 129-160 | Sentence | denotes | Chronic heart disease 3 (13.6) |
| T67 | 161-190 | Sentence | denotes | Chronic lung disease 0 (0.0) |
| T68 | 191-222 | Sentence | denotes | Chronic kidney disease 1 (4.5) |
| T69 | 223-253 | Sentence | denotes | Chronic liver disease 0 (0.0) |
| T70 | 254-280 | Sentence | denotes | Diabetes mellitus 2 (9.1) |
| T71 | 281-310 | Sentence | denotes | Atrial fibrillation 3 (13.6) |
| T72 | 311-338 | Sentence | denotes | No comorbidities 12 (54.4) |
| T73 | 339-363 | Sentence | denotes | COVID-19 characteristics |
| T74 | 364-432 | Sentence | denotes | Neurological insult as initial manifestation of COVID-19 10 (45.5) |
| T75 | 433-512 | Sentence | denotes | Duration between COVID-19 symptoms and neurological insults (days) 8.8 ± 4.4 |
| T76 | 513-529 | Sentence | denotes | Fever 11 (50.0) |
| T77 | 530-546 | Sentence | denotes | Cough 11 (50.0) |
| T78 | 547-566 | Sentence | denotes | Pneumonia 9 (40.9) |
| T79 | 567-589 | Sentence | denotes | Cerebrovascular insult |
| T80 | 590-618 | Sentence | denotes | Hemorrhagic stroke 3 (13.6) |
| T81 | 619-645 | Sentence | denotes | Ischemic stroke 19 (86.4) |
| T82 | 646-693 | Sentence | denotes | Hemorrhagic stroke characteristics and outcomes |
| T83 | 694-746 | Sentence | denotes | 5.0 mm dissecting PICA aneurysm HH3, flow diversion |
| T84 | 747-780 | Sentence | denotes | 15 mm PCOM aneurysm HH4, clipped |
| T85 | 781-844 | Sentence | denotes | 1.4 mm anterior choroidal artery aneurysm HH1, flow diversion |
| T86 | 845-889 | Sentence | denotes | Ischemic stroke characteristics and outcomes |
| T87 | 890-917 | Sentence | denotes | Involved vessels 1.4 ± 0.7 |
| T88 | 918-932 | Sentence | denotes | ICA 3 (15.8) |
| T89 | 933-947 | Sentence | denotes | M1 11 (57.9) |
| T90 | 948-960 | Sentence | denotes | M2 1 (5.3) |
| T91 | 961-982 | Sentence | denotes | Absent LVO 2 (10.5) |
| T92 | 983-997 | Sentence | denotes | CVT 2 (10.5) |
| T93 | 998-1028 | Sentence | denotes | NIHSS at admission 13.8 ± 8.0 |
| T94 | 1029-1071 | Sentence | denotes | Onset to groin access (min) 272.2 ± 169.5 |
| T95 | 1072-1106 | Sentence | denotes | Mechanical thrombectomy 16 (84.2) |
| T96 | 1107-1150 | Sentence | denotes | General endotracheal anesthesia 13 (81.3) |
| T97 | 1151-1165 | Sentence | denotes | MT technique |
| T98 | 1166-1196 | Sentence | denotes | Contact aspiration 2 (12.5) |
| T99 | 1197-1224 | Sentence | denotes | Stent retriever 1 (6.25) |
| T100 | 1225-1277 | Sentence | denotes | Contact aspiration + stent retriever 13 (81.3) |
| T101 | 1278-1316 | Sentence | denotes | Procedure duration (min) 42.2 ± 36.3 |
| T102 | 1317-1345 | Sentence | denotes | Number of passes 2.1 ± 1.3 |
| T103 | 1346-1372 | Sentence | denotes | Rescue stenting 3 (18.8) |
| T104 | 1373-1393 | Sentence | denotes | TICI 2B/3 16 (100) |
| T105 | 1394-1441 | Sentence | denotes | Symptomatic intracerebral hemorrhage 3 (13.6) |
| T106 | 1442-1461 | Sentence | denotes | Laboratory findings |
| T107 | 1462-1486 | Sentence | denotes | CRP (mg/dl) 20.8 ± 37.9 |
| T108 | 1487-1519 | Sentence | denotes | D-dimer (ng/dl) 3497.4 ± 6754.3 |
| T109 | 1520-1553 | Sentence | denotes | Fibrinogen (mg/dl) 329.5 ± 235.4 |
| T110 | 1554-1588 | Sentence | denotes | Interleukin-6 (pg/dl) 41.6 ± 62.0 |
| T111 | 1589-1610 | Sentence | denotes | Outcomes at discharge |
| T112 | 1611-1627 | Sentence | denotes | mRS 3–6 11 (50) |
| T113 | 1628-1647 | Sentence | denotes | Mortality 8 (36.4) |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 187 | 1463-1466 | Gene | denotes | CRP | Gene:1401 |
| 188 | 1555-1568 | Gene | denotes | Interleukin-6 | Gene:3569 |
| 189 | 1521-1531 | Gene | denotes | Fibrinogen | Gene:2244 |
| 190 | 106-118 | Disease | denotes | Hypertension | MESH:D006973 |
| 191 | 138-151 | Disease | denotes | heart disease | MESH:D006331 |
| 192 | 170-182 | Disease | denotes | lung disease | MESH:D008171 |
| 193 | 192-214 | Disease | denotes | Chronic kidney disease | MESH:D051436 |
| 194 | 232-245 | Disease | denotes | liver disease | MESH:D008107 |
| 195 | 255-272 | Disease | denotes | Diabetes mellitus | MESH:D003920 |
| 196 | 282-301 | Disease | denotes | Atrial fibrillation | MESH:D001281 |
| 197 | 339-347 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 198 | 414-422 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 199 | 451-459 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 200 | 514-519 | Disease | denotes | Fever | MESH:D005334 |
| 201 | 531-536 | Disease | denotes | Cough | MESH:D003371 |
| 202 | 548-557 | Disease | denotes | Pneumonia | MESH:D011014 |
| 203 | 567-609 | Disease | denotes | Cerebrovascular insult Hemorrhagic stroke | MESH:D020521 |
| 204 | 629-638 | Disease | denotes | stroke 19 | MESH:C000657245 |
| 205 | 658-664 | Disease | denotes | stroke | MESH:D020521 |
| 206 | 718-726 | Disease | denotes | aneurysm | MESH:D000783 |
| 207 | 759-767 | Disease | denotes | aneurysm | MESH:D000783 |
| 208 | 798-824 | Disease | denotes | choroidal artery aneurysm | MESH:D002532 |
| 209 | 845-860 | Disease | denotes | Ischemic stroke | MESH:D002544 |
| 210 | 1407-1432 | Disease | denotes | intracerebral hemorrhage | MESH:D002543 |
| 211 | 1629-1638 | Disease | denotes | Mortality | MESH:D003643 |