PMC:7532482 / 6757-7640
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7532482","sourcedb":"PMC","sourceid":"7532482","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7532482","text":"Screening of active Ingredients in SFJDC\nWe identified the active ingredients of SFJDC from Traditional Chinese Medicine Systems Pharmacology Database and Analysis Platform (TCMSP http://tcmspw.com/tcmsp.php) 26. TCMSP is a unique herbal pharmacology platform that captures the relationship between drugs, target genes and diseases. The database includes the detection of natural compounds such as chemical, target and drug target networks. ADME is pharmacokinetics, which refers to the absorption, distribution, metabolism and excretion of exogenous chemicals by myosome. The four key parameters of ADME were blood-brain barrier (BBB), oral bioavailability (OB), Caco-2 permeability (Caco-2) and drug-likeness (DL) 27. In this study select candidate compounds which has OB≥30%, DL≥ 0.18, Caco-2≥-0.4, BBB≥-0.3.Then we sorted out each active ingredient for identification of targets.","divisions":[{"label":"title","span":{"begin":0,"end":40}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T13","span":{"begin":610,"end":615},"obj":"Body_part"},{"id":"T14","span":{"begin":616,"end":621},"obj":"Body_part"}],"attributes":[{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A14","pred":"fma_id","subj":"T14","obj":"http://purl.org/sig/ont/fma/fma50801"},{"subj":"T13","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T8","span":{"begin":610,"end":629},"obj":"Body_part"},{"id":"T9","span":{"begin":610,"end":615},"obj":"Body_part"},{"id":"T10","span":{"begin":616,"end":621},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"uberon_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/UBERON_0000120"},{"id":"A9","pred":"uberon_id","subj":"T9","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A10","pred":"uberon_id","subj":"T10","obj":"http://purl.obolibrary.org/obo/UBERON_0000955"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T9","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T10","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T51","span":{"begin":13,"end":19},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T52","span":{"begin":59,"end":65},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"},{"id":"T53","span":{"begin":222,"end":223},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T54","span":{"begin":313,"end":318},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T55","span":{"begin":610,"end":615},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T56","span":{"begin":610,"end":615},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T57","span":{"begin":616,"end":621},"obj":"http://purl.obolibrary.org/obo/UBERON_0000955"},{"id":"T58","span":{"begin":616,"end":621},"obj":"http://www.ebi.ac.uk/efo/EFO_0000302"},{"id":"T59","span":{"begin":664,"end":670},"obj":"http://purl.obolibrary.org/obo/CLO_0002172"},{"id":"T60","span":{"begin":664,"end":670},"obj":"http://purl.obolibrary.org/obo/CLO_0051943"},{"id":"T61","span":{"begin":664,"end":670},"obj":"http://purl.obolibrary.org/obo/CLO_0051958"},{"id":"T62","span":{"begin":664,"end":670},"obj":"http://purl.obolibrary.org/obo/CLO_0051960"},{"id":"T63","span":{"begin":685,"end":691},"obj":"http://purl.obolibrary.org/obo/CLO_0002172"},{"id":"T64","span":{"begin":685,"end":691},"obj":"http://purl.obolibrary.org/obo/CLO_0051943"},{"id":"T65","span":{"begin":685,"end":691},"obj":"http://purl.obolibrary.org/obo/CLO_0051958"},{"id":"T66","span":{"begin":685,"end":691},"obj":"http://purl.obolibrary.org/obo/CLO_0051960"},{"id":"T67","span":{"begin":716,"end":718},"obj":"http://purl.obolibrary.org/obo/CLO_0050509"},{"id":"T68","span":{"begin":767,"end":770},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"},{"id":"T69","span":{"begin":789,"end":795},"obj":"http://purl.obolibrary.org/obo/CLO_0002172"},{"id":"T70","span":{"begin":789,"end":795},"obj":"http://purl.obolibrary.org/obo/CLO_0051943"},{"id":"T71","span":{"begin":789,"end":795},"obj":"http://purl.obolibrary.org/obo/CLO_0051958"},{"id":"T72","span":{"begin":789,"end":795},"obj":"http://purl.obolibrary.org/obo/CLO_0051960"},{"id":"T73","span":{"begin":835,"end":841},"obj":"http://purl.obolibrary.org/obo/CLO_0001658"}],"attributes":[{"subj":"T51","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T52","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T53","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T54","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T55","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T56","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T57","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T58","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T59","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T60","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T66","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T67","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T68","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T69","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T70","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T71","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T72","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T73","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T38","span":{"begin":299,"end":304},"obj":"Chemical"},{"id":"T39","span":{"begin":419,"end":423},"obj":"Chemical"},{"id":"T40","span":{"begin":697,"end":701},"obj":"Chemical"},{"id":"T41","span":{"begin":712,"end":714},"obj":"Chemical"},{"id":"T42","span":{"begin":779,"end":781},"obj":"Chemical"}],"attributes":[{"id":"A38","pred":"chebi_id","subj":"T38","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"},{"id":"A39","pred":"chebi_id","subj":"T39","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"},{"id":"A40","pred":"chebi_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/CHEBI_23888"},{"id":"A41","pred":"chebi_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/CHEBI_68596"},{"id":"A42","pred":"chebi_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/CHEBI_68596"},{"subj":"T38","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T39","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T40","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T41","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T42","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T6","span":{"begin":513,"end":523},"obj":"http://purl.obolibrary.org/obo/GO_0008152"},{"id":"T7","span":{"begin":528,"end":537},"obj":"http://purl.obolibrary.org/obo/GO_0007588"}],"attributes":[{"subj":"T6","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T7","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T49","span":{"begin":0,"end":40},"obj":"Sentence"},{"id":"T50","span":{"begin":41,"end":212},"obj":"Sentence"},{"id":"T51","span":{"begin":213,"end":332},"obj":"Sentence"},{"id":"T52","span":{"begin":333,"end":440},"obj":"Sentence"},{"id":"T53","span":{"begin":441,"end":572},"obj":"Sentence"},{"id":"T54","span":{"begin":573,"end":719},"obj":"Sentence"},{"id":"T55","span":{"begin":720,"end":883},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T49","pred":"source","obj":"LitCovid-sentences"},{"subj":"T50","pred":"source","obj":"LitCovid-sentences"},{"subj":"T51","pred":"source","obj":"LitCovid-sentences"},{"subj":"T52","pred":"source","obj":"LitCovid-sentences"},{"subj":"T53","pred":"source","obj":"LitCovid-sentences"},{"subj":"T54","pred":"source","obj":"LitCovid-sentences"},{"subj":"T55","pred":"source","obj":"LitCovid-sentences"}]},{"project":"LitCovid-PubTator","denotations":[{"id":"142","span":{"begin":771,"end":773},"obj":"Gene"},{"id":"143","span":{"begin":659,"end":661},"obj":"Gene"},{"id":"144","span":{"begin":441,"end":445},"obj":"Chemical"},{"id":"145","span":{"begin":789,"end":795},"obj":"Chemical"}],"attributes":[{"id":"A142","pred":"tao:has_database_id","subj":"142","obj":"Gene:1009"},{"id":"A143","pred":"tao:has_database_id","subj":"143","obj":"Gene:1009"},{"subj":"142","pred":"source","obj":"LitCovid-PubTator"},{"subj":"143","pred":"source","obj":"LitCovid-PubTator"},{"subj":"144","pred":"source","obj":"LitCovid-PubTator"},{"subj":"145","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93eca8","default":true},{"id":"LitCovid-PD-UBERON","color":"#ec9397"},{"id":"LitCovid-PD-CLO","color":"#93b1ec"},{"id":"LitCovid-PD-CHEBI","color":"#cbec93"},{"id":"LitCovid-PD-GO-BP","color":"#ec93e5"},{"id":"LitCovid-sentences","color":"#93ecd8"},{"id":"LitCovid-PubTator","color":"#ecbe93"}]}]}}