PMC:7532482 / 14135-14806 JSONTXT

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T141","span":{"begin":264,"end":269},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T142","span":{"begin":271,"end":272},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T143","span":{"begin":299,"end":304},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T144","span":{"begin":455,"end":460},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T145","span":{"begin":487,"end":488},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T146","span":{"begin":555,"end":557},"obj":"http://purl.obolibrary.org/obo/CLO_0001387"},{"id":"T147","span":{"begin":564,"end":569},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T148","span":{"begin":639,"end":644},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T149","span":{"begin":645,"end":650},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T150","span":{"begin":665,"end":670},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"}],"text":"PPI network of SFJDC against NCP were visualized using Cytoscape software. The network contained 2407 nodes and 53639 edges was shown in Figure 4A. The average degree of all nodes was 44.5692 and we selected the nodes with more than 44.5692 degrees as significant genes. A subnetwork of significant genes for SFJDC against NCP was constructed which consisted of 766 nodes and 28872 edges (Figure 4B). The average value of BC was 711.9504. The significant genes were further screened and a new network was constructed with 169 nodes and 4238 edges (Figure 4C). 169 genes were eventually identified for SFJDC against NCP including 156 other human genes and 13 target genes."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T92","span":{"begin":0,"end":3},"obj":"Chemical"}],"attributes":[{"id":"A92","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_53266"},{"id":"A93","pred":"chebi_id","subj":"T92","obj":"http://purl.obolibrary.org/obo/CHEBI_60614"}],"text":"PPI network of SFJDC against NCP were visualized using Cytoscape software. The network contained 2407 nodes and 53639 edges was shown in Figure 4A. The average degree of all nodes was 44.5692 and we selected the nodes with more than 44.5692 degrees as significant genes. A subnetwork of significant genes for SFJDC against NCP was constructed which consisted of 766 nodes and 28872 edges (Figure 4B). The average value of BC was 711.9504. The significant genes were further screened and a new network was constructed with 169 nodes and 4238 edges (Figure 4C). 169 genes were eventually identified for SFJDC against NCP including 156 other human genes and 13 target genes."}

{"project":"LitCovid-PubTator","denotations":[{"id":"195","span":{"begin":639,"end":644},"obj":"Species"}],"attributes":[{"id":"A195","pred":"tao:has_database_id","subj":"195","obj":"Tax:9606"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"PPI network of SFJDC against NCP were visualized using Cytoscape software. The network contained 2407 nodes and 53639 edges was shown in Figure 4A. The average degree of all nodes was 44.5692 and we selected the nodes with more than 44.5692 degrees as significant genes. A subnetwork of significant genes for SFJDC against NCP was constructed which consisted of 766 nodes and 28872 edges (Figure 4B). The average value of BC was 711.9504. The significant genes were further screened and a new network was constructed with 169 nodes and 4238 edges (Figure 4C). 169 genes were eventually identified for SFJDC against NCP including 156 other human genes and 13 target genes."}

{"project":"LitCovid-sentences","denotations":[{"id":"T116","span":{"begin":0,"end":74},"obj":"Sentence"},{"id":"T117","span":{"begin":75,"end":147},"obj":"Sentence"},{"id":"T118","span":{"begin":148,"end":270},"obj":"Sentence"},{"id":"T119","span":{"begin":271,"end":400},"obj":"Sentence"},{"id":"T120","span":{"begin":401,"end":438},"obj":"Sentence"},{"id":"T121","span":{"begin":439,"end":559},"obj":"Sentence"},{"id":"T122","span":{"begin":560,"end":671},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"PPI network of SFJDC against NCP were visualized using Cytoscape software. The network contained 2407 nodes and 53639 edges was shown in Figure 4A. The average degree of all nodes was 44.5692 and we selected the nodes with more than 44.5692 degrees as significant genes. A subnetwork of significant genes for SFJDC against NCP was constructed which consisted of 766 nodes and 28872 edges (Figure 4B). The average value of BC was 711.9504. The significant genes were further screened and a new network was constructed with 169 nodes and 4238 edges (Figure 4C). 169 genes were eventually identified for SFJDC against NCP including 156 other human genes and 13 target genes."}