PMC:7519301 / 86-866
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T1 | 472-479 | Body_part | denotes | genomes | http://purl.org/sig/ont/fma/fma84116 |
T2 | 506-513 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T3 | 51-59 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T4 | 61-69 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T5 | 61-65 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T6 | 304-312 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T7 | 304-308 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T8 | 461-469 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T9 | 461-465 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T10 | 699-707 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T11 | 699-703 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 37-42 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T3 | 115-116 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T4 | 152-157 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
T5 | 172-173 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T6 | 534-537 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T7 | 730-731 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T1 | 506-513 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id | tao:has_standard_notation |
---|---|---|---|---|---|---|
10 | 500-505 | Gene | denotes | Spike | Gene:43740568 | |
11 | 619-623 | Gene | denotes | ACE2 | Gene:59272 | |
12 | 61-71 | Species | denotes | SARS-CoV-2 | Tax:2697049 | |
13 | 304-314 | Species | denotes | SARS-CoV-2 | Tax:2697049 | |
14 | 461-471 | Species | denotes | SARS-CoV-2 | Tax:2697049 | |
15 | 699-709 | Species | denotes | SARS-CoV-2 | Tax:2697049 | |
16 | 51-59 | Disease | denotes | COVID-19 | MESH:C000657245 | |
17 | 519-524 | Mutation | denotes | D614G | p.D614G |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 0-12 | Sentence | denotes | Significance |
T3 | 13-147 | Sentence | denotes | The rapid spread of the virus causing COVID-19, SARS-CoV-2, raises questions about the possibility of a universally effective vaccine. |
T4 | 148-257 | Sentence | denotes | The virus can mutate in a given individual, and these variants can be propagated across populations and time. |
T5 | 258-353 | Sentence | denotes | To understand this process, we analyze 18,514 SARS-CoV-2 sequences sampled since December 2019. |
T6 | 354-480 | Sentence | denotes | We find that neutral evolution, rather than adaptive selection, can explain the rare mutations seen across SARS-CoV-2 genomes. |
T7 | 481-633 | Sentence | denotes | In the immunogenic Spike protein, the D614G mutation has become consensus, yet there is no evidence of mutations affecting binding to the ACE2 receptor. |
T8 | 634-780 | Sentence | denotes | Our results suggest that, to date, the limited diversity seen in SARS-CoV-2 should not preclude a single vaccine from providing global protection. |