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PMC:7519301 / 42639-43312 JSONTXT

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LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T304 33-34 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T305 94-100 http://purl.obolibrary.org/obo/CLO_0002045 denotes b(t)=b
T306 134-138 http://purl.obolibrary.org/obo/CLO_0002040 denotes b(t)
T307 149-150 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T308 281-283 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T309 297-299 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T310 664-667 http://purl.obolibrary.org/obo/NCBITaxon_314295 denotes ape

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T264 0-311 Sentence denotes Phylogenies were simulated using a time-forward branching process under constant birth rates (b(t)=b) and time-dependent birth rates (b(t)=beαt) for b = 0.01, 0.03, 0.05, 0.07, and 0.09 and α = ±0.01, ±0.11, ±0.21, ±0.31, and ±0.41, for 20, 220, 420, 620, and 820 tips, and for 1, 11, 21, 31, and 41 time units.
T265 312-381 Sentence denotes Simulated phylogenies were downsampled at 0%, 10%, 30%, 50%, and 70%.
T266 382-432 Sentence denotes For each scenario, 100 phylogenies were simulated.
T267 433-554 Sentence denotes Time-dependent diversification (i.e., η across subtrees) was calculated for each phylogeny simulated under each scenario.
T268 555-673 Sentence denotes Simulations were conducted using the R packages RPANDA (R Phylogenetic ANalyses of DiversificAtion) (61) and ape (53).

2_test

Id Subject Object Predicate Lexical cue
32868447-30016406-132542433 669-671 30016406 denotes 53