
PMC:7519301 / 42639-43312
Annnotations
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T304 | 33-34 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T305 | 94-100 | http://purl.obolibrary.org/obo/CLO_0002045 | denotes | b(t)=b |
T306 | 134-138 | http://purl.obolibrary.org/obo/CLO_0002040 | denotes | b(t) |
T307 | 149-150 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T308 | 281-283 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
T309 | 297-299 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
T310 | 664-667 | http://purl.obolibrary.org/obo/NCBITaxon_314295 | denotes | ape |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T264 | 0-311 | Sentence | denotes | Phylogenies were simulated using a time-forward branching process under constant birth rates (b(t)=b) and time-dependent birth rates (b(t)=beαt) for b = 0.01, 0.03, 0.05, 0.07, and 0.09 and α = ±0.01, ±0.11, ±0.21, ±0.31, and ±0.41, for 20, 220, 420, 620, and 820 tips, and for 1, 11, 21, 31, and 41 time units. |
T265 | 312-381 | Sentence | denotes | Simulated phylogenies were downsampled at 0%, 10%, 30%, 50%, and 70%. |
T266 | 382-432 | Sentence | denotes | For each scenario, 100 phylogenies were simulated. |
T267 | 433-554 | Sentence | denotes | Time-dependent diversification (i.e., η across subtrees) was calculated for each phylogeny simulated under each scenario. |
T268 | 555-673 | Sentence | denotes | Simulations were conducted using the R packages RPANDA (R Phylogenetic ANalyses of DiversificAtion) (61) and ape (53). |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32868447-30016406-132542433 | 669-671 | 30016406 | denotes | 53 |