PMC:7519301 / 42618-43312 JSON TXT

Annnotations TAB JSON ListView MergeView

Id	Subject	Object	Predicate	Lexical cue
T304	54-55	http://purl.obolibrary.org/obo/CLO_0001020	denotes	a
T305	115-121	http://purl.obolibrary.org/obo/CLO_0002045	denotes	b(t)=b
T306	155-159	http://purl.obolibrary.org/obo/CLO_0002040	denotes	b(t)
T307	170-171	http://purl.obolibrary.org/obo/CLO_0001021	denotes	b
T308	302-304	http://purl.obolibrary.org/obo/CLO_0053733	denotes	11
T309	318-320	http://purl.obolibrary.org/obo/CLO_0053794	denotes	41
T310	685-688	http://purl.obolibrary.org/obo/NCBITaxon_314295	denotes	ape

Id	Subject	Object	Predicate	Lexical cue
T263	0-20	Sentence	denotes	Simulation analyses.
T264	21-332	Sentence	denotes	Phylogenies were simulated using a time-forward branching process under constant birth rates (b(t)=b) and time-dependent birth rates (b(t)=beαt) for b = 0.01, 0.03, 0.05, 0.07, and 0.09 and α = ±0.01, ±0.11, ±0.21, ±0.31, and ±0.41, for 20, 220, 420, 620, and 820 tips, and for 1, 11, 21, 31, and 41 time units.
T265	333-402	Sentence	denotes	Simulated phylogenies were downsampled at 0%, 10%, 30%, 50%, and 70%.
T266	403-453	Sentence	denotes	For each scenario, 100 phylogenies were simulated.
T267	454-575	Sentence	denotes	Time-dependent diversification (i.e., η across subtrees) was calculated for each phylogeny simulated under each scenario.
T268	576-694	Sentence	denotes	Simulations were conducted using the R packages RPANDA (R Phylogenetic ANalyses of DiversificAtion) (61) and ape (53).

Id	Subject	Object	Predicate	Lexical cue
32868447-30016406-132542433	690-692	30016406	denotes	53