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PMC:7473770 / 9203-9777 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T41 54-60 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T42 281-285 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T43 286-293 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T35 6-11 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542
T36 54-60 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T37 281-285 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T72 37-38 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T73 52-53 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T74 149-150 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T75 220-221 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T76 281-285 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T77 281-285 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T78 315-316 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 388-389 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 419-420 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T46 0-35 Sentence denotes Multi-scale x-ray tomography setup.
T47 36-216 Sentence denotes (a) HE stain of a tissue micro-array paraffin block with samples of all six patients who succumbed to Covid-19. (b) Schematic representation of the sample preparation and mounting.
T48 217-574 Sentence denotes In a first step biopsy punches containing the entire individual lung tissues are transferred onto a holder for the parallel-beam local tomography acquisition, followed by a further reduction in size to a 1 mm biopsy punch, for cone-beam tomographic recordings. (c) Configuration for parallel-beam tomography. (d) Configuration for cone-beam holo-tomography.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
122 112-120 Species denotes patients Tax:9606
123 40-42 Chemical denotes HE
124 73-81 Chemical denotes paraffin MESH:D010232
125 138-146 Disease denotes Covid-19 MESH:C000657245