PMC:7473770 / 2959-3709
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T22 | 74-80 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T23 | 198-202 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
| T24 | 317-322 | Body_part | denotes | lungs | http://purl.org/sig/ont/fma/fma68877 |
| T25 | 594-600 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
| T26 | 621-625 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T16 | 74-80 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T17 | 198-202 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T18 | 594-600 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
| T19 | 621-625 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
| T20 | 678-684 | Body_part | denotes | scales | http://purl.obolibrary.org/obo/UBERON_0002542 |
| T21 | 698-708 | Body_part | denotes | extensions | http://purl.obolibrary.org/obo/UBERON_2000106 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T20 | 198-211 | Disease | denotes | lung diseases | http://purl.obolibrary.org/obo/MONDO_0005275 |
| T21 | 245-254 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T28 | 198-202 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T29 | 198-202 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
| T30 | 231-236 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T31 | 317-322 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lungs |
| T32 | 324-338 | http://www.ebi.ac.uk/efo/EFO_0000881 | denotes | digitalization |
| T33 | 437-438 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T34 | 621-625 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
| T35 | 621-625 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T16 | 0-255 | Sentence | denotes | Histomorphological assessment of formalin-fixed, paraffin-embedded (FFPE) tissue stained with haematoxylin and eosin still represents the gold standard in histological diagnostics of non-neoplastic lung diseases, including DAD and virus induced pneumonia. |
| T17 | 256-531 | Sentence | denotes | In order to unravel the corresponding pathophysiology of the lungs, digitalization, visualization and quantification of the morphological changes associated with Covid-19 represent a key challenge, and require both high resolution and the capability to screen larger volumes. |
| T18 | 532-750 | Sentence | denotes | For this reason, imaging the intricate three-dimensional (3D) tissue architecture of the lung and its pathological alterations on multiple length scales calls for 3D extensions of well-established histology techniques. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T9 | 198-211 | Phenotype | denotes | lung diseases | http://purl.obolibrary.org/obo/HP_0002088 |
| T10 | 223-226 | Phenotype | denotes | DAD | http://purl.obolibrary.org/obo/HP_0033006 |
| T11 | 245-254 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 85 | 33-41 | Chemical | denotes | formalin | MESH:D005557 |
| 86 | 49-57 | Chemical | denotes | paraffin | MESH:D010232 |
| 87 | 94-106 | Chemical | denotes | haematoxylin | MESH:D006416 |
| 88 | 111-116 | Chemical | denotes | eosin | MESH:D004801 |
| 89 | 198-211 | Disease | denotes | lung diseases | MESH:D008171 |
| 90 | 245-254 | Disease | denotes | pneumonia | MESH:D011014 |
| 91 | 418-426 | Disease | denotes | Covid-19 | MESH:C000657245 |