PMC:7473770 / 27884-28528 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7473770","sourcedb":"PMC","sourceid":"7473770","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7473770","text":"Figure 9. Segmentation of the blood vessel network, exemplified for biopsy (V).\n(a) Series of slices in z-direction illustrate the separation of a capillary (≈5μm diameter) from a blood vessel. Red arrow marks the separating capillary. In slice 314, the capillary is entirely filled with erythrocytes. (b) Red lines in the entire virtual slice (336) represent the contours of a manual segmentation of the blood vessel network. Three capillaries already separated from the main vessel, while the fourth starts to emerge, indicated by the red arrow. (c) Segmentation illustrating the 3D structure of the blood vessel network. Scale bars: 50⁢μ⁢m.","divisions":[{"label":"label","span":{"begin":0,"end":9}},{"label":"title","span":{"begin":11,"end":80}}],"tracks":[{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T202","span":{"begin":31,"end":43},"obj":"Body_part"},{"id":"T203","span":{"begin":148,"end":157},"obj":"Body_part"},{"id":"T204","span":{"begin":181,"end":193},"obj":"Body_part"},{"id":"T205","span":{"begin":226,"end":235},"obj":"Body_part"},{"id":"T206","span":{"begin":255,"end":264},"obj":"Body_part"},{"id":"T207","span":{"begin":289,"end":301},"obj":"Body_part"},{"id":"T208","span":{"begin":406,"end":418},"obj":"Body_part"},{"id":"T209","span":{"begin":434,"end":445},"obj":"Body_part"},{"id":"T210","span":{"begin":603,"end":615},"obj":"Body_part"}],"attributes":[{"id":"A202","pred":"fma_id","subj":"T202","obj":"http://purl.org/sig/ont/fma/fma63183"},{"id":"A203","pred":"fma_id","subj":"T203","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A204","pred":"fma_id","subj":"T204","obj":"http://purl.org/sig/ont/fma/fma63183"},{"id":"A205","pred":"fma_id","subj":"T205","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A206","pred":"fma_id","subj":"T206","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A207","pred":"fma_id","subj":"T207","obj":"http://purl.org/sig/ont/fma/fma62845"},{"id":"A208","pred":"fma_id","subj":"T208","obj":"http://purl.org/sig/ont/fma/fma63183"},{"id":"A209","pred":"fma_id","subj":"T209","obj":"http://purl.org/sig/ont/fma/fma63194"},{"id":"A210","pred":"fma_id","subj":"T210","obj":"http://purl.org/sig/ont/fma/fma63183"},{"subj":"T202","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T203","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T204","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T205","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T206","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T207","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T208","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T209","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T210","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T188","span":{"begin":31,"end":43},"obj":"Body_part"},{"id":"T189","span":{"begin":31,"end":36},"obj":"Body_part"},{"id":"T190","span":{"begin":37,"end":43},"obj":"Body_part"},{"id":"T191","span":{"begin":148,"end":157},"obj":"Body_part"},{"id":"T192","span":{"begin":181,"end":193},"obj":"Body_part"},{"id":"T193","span":{"begin":181,"end":186},"obj":"Body_part"},{"id":"T194","span":{"begin":187,"end":193},"obj":"Body_part"},{"id":"T195","span":{"begin":226,"end":235},"obj":"Body_part"},{"id":"T196","span":{"begin":255,"end":264},"obj":"Body_part"},{"id":"T197","span":{"begin":406,"end":418},"obj":"Body_part"},{"id":"T198","span":{"begin":406,"end":411},"obj":"Body_part"},{"id":"T199","span":{"begin":412,"end":418},"obj":"Body_part"},{"id":"T200","span":{"begin":478,"end":484},"obj":"Body_part"},{"id":"T201","span":{"begin":603,"end":615},"obj":"Body_part"},{"id":"T202","span":{"begin":603,"end":608},"obj":"Body_part"},{"id":"T203","span":{"begin":609,"end":615},"obj":"Body_part"},{"id":"T204","span":{"begin":625,"end":630},"obj":"Body_part"}],"attributes":[{"id":"A188","pred":"uberon_id","subj":"T188","obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"A189","pred":"uberon_id","subj":"T189","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A190","pred":"uberon_id","subj":"T190","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A191","pred":"uberon_id","subj":"T191","obj":"http://purl.obolibrary.org/obo/UBERON_0001982"},{"id":"A192","pred":"uberon_id","subj":"T192","obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"A193","pred":"uberon_id","subj":"T193","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A194","pred":"uberon_id","subj":"T194","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A195","pred":"uberon_id","subj":"T195","obj":"http://purl.obolibrary.org/obo/UBERON_0001982"},{"id":"A196","pred":"uberon_id","subj":"T196","obj":"http://purl.obolibrary.org/obo/UBERON_0001982"},{"id":"A197","pred":"uberon_id","subj":"T197","obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"A198","pred":"uberon_id","subj":"T198","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A199","pred":"uberon_id","subj":"T199","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A200","pred":"uberon_id","subj":"T200","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A201","pred":"uberon_id","subj":"T201","obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"A202","pred":"uberon_id","subj":"T202","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A203","pred":"uberon_id","subj":"T203","obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"A204","pred":"uberon_id","subj":"T204","obj":"http://purl.obolibrary.org/obo/UBERON_0002542"},{"subj":"T188","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T189","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T190","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T191","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T192","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T193","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T194","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T195","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T196","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T197","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T198","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T199","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T200","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T201","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T202","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T203","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T204","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T284","span":{"begin":31,"end":43},"obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"T285","span":{"begin":31,"end":43},"obj":"http://www.ebi.ac.uk/efo/EFO_0000817"},{"id":"T286","span":{"begin":82,"end":83},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T287","span":{"begin":146,"end":147},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T288","span":{"begin":179,"end":180},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T289","span":{"begin":181,"end":193},"obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"T290","span":{"begin":181,"end":193},"obj":"http://www.ebi.ac.uk/efo/EFO_0000817"},{"id":"T291","span":{"begin":289,"end":301},"obj":"http://purl.obolibrary.org/obo/CL_0000232"},{"id":"T292","span":{"begin":304,"end":305},"obj":"http://purl.obolibrary.org/obo/CLO_0001021"},{"id":"T293","span":{"begin":377,"end":378},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T294","span":{"begin":406,"end":418},"obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"T295","span":{"begin":406,"end":418},"obj":"http://www.ebi.ac.uk/efo/EFO_0000817"},{"id":"T296","span":{"begin":478,"end":484},"obj":"http://purl.obolibrary.org/obo/UBERON_0000055"},{"id":"T297","span":{"begin":603,"end":615},"obj":"http://purl.obolibrary.org/obo/UBERON_0001981"},{"id":"T298","span":{"begin":603,"end":615},"obj":"http://www.ebi.ac.uk/efo/EFO_0000817"}],"attributes":[{"subj":"T284","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T285","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T286","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T287","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T288","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T289","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T290","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T291","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T292","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T293","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T294","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T295","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T296","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T297","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T298","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T33","span":{"begin":11,"end":23},"obj":"http://purl.obolibrary.org/obo/GO_0035282"},{"id":"T34","span":{"begin":386,"end":398},"obj":"http://purl.obolibrary.org/obo/GO_0035282"},{"id":"T35","span":{"begin":553,"end":565},"obj":"http://purl.obolibrary.org/obo/GO_0035282"}],"attributes":[{"subj":"T33","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T34","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T35","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T212","span":{"begin":0,"end":9},"obj":"Sentence"},{"id":"T213","span":{"begin":11,"end":80},"obj":"Sentence"},{"id":"T214","span":{"begin":81,"end":194},"obj":"Sentence"},{"id":"T215","span":{"begin":195,"end":236},"obj":"Sentence"},{"id":"T216","span":{"begin":237,"end":427},"obj":"Sentence"},{"id":"T217","span":{"begin":428,"end":624},"obj":"Sentence"},{"id":"T218","span":{"begin":625,"end":636},"obj":"Sentence"},{"id":"T219","span":{"begin":637,"end":644},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T212","pred":"source","obj":"LitCovid-sentences"},{"subj":"T213","pred":"source","obj":"LitCovid-sentences"},{"subj":"T214","pred":"source","obj":"LitCovid-sentences"},{"subj":"T215","pred":"source","obj":"LitCovid-sentences"},{"subj":"T216","pred":"source","obj":"LitCovid-sentences"},{"subj":"T217","pred":"source","obj":"LitCovid-sentences"},{"subj":"T218","pred":"source","obj":"LitCovid-sentences"},{"subj":"T219","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PD-FMA-UBERON","color":"#93ecd2","default":true},{"id":"LitCovid-PD-UBERON","color":"#ecb893"},{"id":"LitCovid-PD-CLO","color":"#9e93ec"},{"id":"LitCovid-PD-GO-BP","color":"#a2ec93"},{"id":"LitCovid-sentences","color":"#ec93bc"}]}]}}