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PMC:7473770 / 26694-27883 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T189 26-39 Body_part denotes blood vessels http://purl.org/sig/ont/fma/fma63183
T190 26-31 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T191 87-99 Body_part denotes blood vessel http://purl.org/sig/ont/fma/fma63183
T192 227-236 Body_part denotes capillary http://purl.org/sig/ont/fma/fma63194
T193 383-395 Body_part denotes blood vessel http://purl.org/sig/ont/fma/fma63183
T194 505-514 Body_part denotes capillary http://purl.org/sig/ont/fma/fma63194
T195 541-550 Body_part denotes capillary http://purl.org/sig/ont/fma/fma63194
T196 575-580 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T197 603-612 Body_part denotes capillary http://purl.org/sig/ont/fma/fma63194
T198 689-701 Body_part denotes blood vessel http://purl.org/sig/ont/fma/fma63183
T199 813-824 Body_part denotes capillaries http://purl.org/sig/ont/fma/fma63194
T200 953-965 Body_part denotes blood vessel http://purl.org/sig/ont/fma/fma63183
T201 1067-1079 Body_part denotes blood vessel http://purl.org/sig/ont/fma/fma63183

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T165 26-39 Body_part denotes blood vessels http://purl.obolibrary.org/obo/UBERON_0001981
T166 26-31 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T167 32-39 Body_part denotes vessels http://purl.obolibrary.org/obo/UBERON_0000055
T168 87-99 Body_part denotes blood vessel http://purl.obolibrary.org/obo/UBERON_0001981
T169 87-92 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T170 93-99 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T171 227-236 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982
T172 383-395 Body_part denotes blood vessel http://purl.obolibrary.org/obo/UBERON_0001981
T173 383-388 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T174 389-395 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T175 505-514 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982
T176 541-550 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982
T177 603-612 Body_part denotes capillary http://purl.obolibrary.org/obo/UBERON_0001982
T178 689-701 Body_part denotes blood vessel http://purl.obolibrary.org/obo/UBERON_0001981
T179 689-694 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T180 695-701 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T181 862-868 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T182 953-965 Body_part denotes blood vessel http://purl.obolibrary.org/obo/UBERON_0001981
T183 953-958 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T184 959-965 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055
T185 1067-1079 Body_part denotes blood vessel http://purl.obolibrary.org/obo/UBERON_0001981
T186 1067-1072 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T187 1073-1079 Body_part denotes vessel http://purl.obolibrary.org/obo/UBERON_0000055

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T264 26-39 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessels
T265 26-39 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessels
T266 75-76 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T267 87-99 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessel
T268 87-99 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessel
T269 218-219 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T270 238-239 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T271 365-366 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T272 383-395 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessel
T273 383-395 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessel
T274 575-580 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T275 632-635 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T276 636-637 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T277 689-701 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessel
T278 689-701 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessel
T279 862-868 http://purl.obolibrary.org/obo/UBERON_0000055 denotes vessel
T280 953-965 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessel
T281 953-965 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessel
T282 1067-1079 http://purl.obolibrary.org/obo/UBERON_0001981 denotes blood vessel
T283 1067-1079 http://www.ebi.ac.uk/efo/EFO_0000817 denotes blood vessel

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T27 10-22 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T28 138-150 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T29 669-681 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T30 1008-1020 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T31 1047-1059 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentation
T32 1175-1188 http://purl.obolibrary.org/obo/GO_0035282 denotes segmentations

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T201 0-133 Sentence denotes Next, the segmentation of blood vessels is demonstrated for the example of a splitting blood vessel in the zoom tomogram of sample V.
T202 134-174 Sentence denotes The segmentation was performed manually.
T203 175-321 Sentence denotes To give an impression of the separation of a single capillary, a series of virtual slices in the xy-plane (magnified views) is shown in Figure 9a.
T204 322-417 Sentence denotes The separation starts with the creation of a branch from the blood vessel (arrow in slice 336).
T205 418-515 Sentence denotes In slice 326, 1.7⁢μ⁢m above slice 336, this branch evolves into an empty and separated capillary.
T206 516-581 Sentence denotes Another 2⁢μ⁢m above, the capillary is entirely filled with cells.
T207 582-664 Sentence denotes Further 2.3⁢μ⁢m, the capillary is empty again and has a diameter of about 2.8⁢μ⁢m.
T208 665-791 Sentence denotes The segmentation of the blood vessel with all its separated branches is indicated for slice 336 in Figure 9b by the red lines.
T209 792-932 Sentence denotes In this slice, three capillaries have already separated from the main vessel, while the fourth starts to emerge, indicated by the red arrow.
T210 933-1041 Sentence denotes The 3D shape of the blood vessel is illustrated by the 3D rendering of the segmentation, shown in Figure 9c.
T211 1042-1189 Sentence denotes This segmentation of the blood vessel shows the potential of the datasets, which may be fully exploited in future with more advanced segmentations.