PMC:7473478 / 7748-9046
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T102 | 196-204 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T103 | 216-225 | Body_part | denotes | cytokines | http://purl.org/sig/ont/fma/fma84050 |
| T104 | 227-237 | Body_part | denotes | chemokines | http://purl.org/sig/ont/fma/fma241981 |
| T105 | 337-347 | Body_part | denotes | Stem cells | http://purl.org/sig/ont/fma/fma63368 |
| T106 | 342-347 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T107 | 490-495 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T108 | 661-665 | Body_part | denotes | tRNA | http://purl.org/sig/ont/fma/fma67127 |
| T109 | 714-722 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T110 | 740-745 | Body_part | denotes | lipid | http://purl.org/sig/ont/fma/fma67264 |
| T111 | 848-863 | Body_part | denotes | plasma membrane | http://purl.org/sig/ont/fma/fma63841 |
| T112 | 883-888 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T113 | 935-939 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T114 | 1132-1137 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T115 | 1285-1292 | Body_part | denotes | tissues | http://purl.org/sig/ont/fma/fma9637 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T19 | 1087-1091 | Body_part | denotes | mole | http://purl.obolibrary.org/obo/UBERON_1000010 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T35 | 1087-1091 | Disease | denotes | mole | http://purl.obolibrary.org/obo/MONDO_0005073 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T102 | 3-6 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T103 | 81-82 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T104 | 337-347 | http://purl.obolibrary.org/obo/CL_0000034 | denotes | Stem cells |
| T105 | 490-495 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T106 | 534-544 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signalling |
| T107 | 546-548 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T108 | 848-854 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
| T109 | 855-863 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T110 | 883-888 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T111 | 935-939 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T112 | 1132-1137 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T59 | 196-204 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T60 | 511-520 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
| T61 | 602-611 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
| T62 | 714-722 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T63 | 728-734 | Chemical | denotes | lipids | http://purl.obolibrary.org/obo/CHEBI_18059 |
| T64 | 740-745 | Chemical | denotes | lipid | http://purl.obolibrary.org/obo/CHEBI_18059 |
| T65 | 899-908 | Chemical | denotes | molecules | http://purl.obolibrary.org/obo/CHEBI_25367 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 201 | 464-472 | Species | denotes | patients | Tax:9606 |
| 202 | 740-745 | Chemical | denotes | lipid | MESH:D008055 |
| 203 | 1244-1252 | Disease | denotes | fibrosis | MESH:D005355 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T27 | 239-245 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T28 | 524-544 | http://purl.obolibrary.org/obo/GO_0038001 | denotes | paracrine signalling |
| T29 | 534-544 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signalling |
| T30 | 661-665 | http://purl.obolibrary.org/obo/GO_0030533 | denotes | tRNA |
| T31 | 698-704 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T32 | 921-946 | http://purl.obolibrary.org/obo/GO_0001558 | denotes | regulation of cell growth |
| T33 | 921-931 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulation |
| T34 | 935-946 | http://purl.obolibrary.org/obo/GO_0016049 | denotes | cell growth |
| T35 | 940-946 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T36 | 977-993 | http://purl.obolibrary.org/obo/GO_0006955 | denotes | immune responses |
| T37 | 1219-1228 | http://purl.obolibrary.org/obo/GO_0097194 | denotes | apoptosis |
| T38 | 1219-1228 | http://purl.obolibrary.org/obo/GO_0006915 | denotes | apoptosis |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T9 | 1087-1091 | Phenotype | denotes | mole | http://purl.obolibrary.org/obo/HP_0003764 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T61 | 0-160 | Sentence | denotes | It has currently become apparent that MSCs induce therapeutic characteristics by a paracrine pathway by releasing bioactive substances known as secretomes (25). |
| T62 | 161-336 | Sentence | denotes | MSC-secretomes are made of soluble proteins, including cytokines, chemokines, growth factors, and extracellular vesicles (EVs), which include micro-vesicles and exosomes (26). |
| T63 | 337-404 | Sentence | denotes | Stem cells release these secretomes by common secretory mechanisms. |
| T64 | 405-550 | Sentence | denotes | When the culture medium or secretome are injected into the patients, the neighboring cells assimilate the molecules by paracrine signalling (27). |
| T65 | 551-735 | Sentence | denotes | The exosomes themselves contain numerous bioactive molecules, which include microRNAs (miRNA), transfer RNAs (tRNA), long noncoding RNAs (lncRNA), growth factors, proteins, and lipids. |
| T66 | 736-894 | Sentence | denotes | The lipid content of the exosomes provide an added advantage by aiding in the infusion of the exosomes with the plasma membrane of the neighboring cells (28). |
| T67 | 895-1058 | Sentence | denotes | The molecules involved in regulation of cell growth, proliferation, survival, and immune responses are released by exosomes, are elaborately illustrated in Fig. 2. |
| T68 | 1059-1298 | Sentence | denotes | Upon internalization of the mole-cules in the secretome, the neighboring cells modulate various downstream pathways, including immunomodulation, suppression of apoptosis, prevention of fibrosis, and remodelling of the injured tissues (25). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32731913-32283815-8028476 | 156-158 | 32283815 | denotes | 25 |
| 32731913-28736264-8028477 | 332-334 | 28736264 | denotes | 26 |
| 32731913-32371362-8028478 | 546-548 | 32371362 | denotes | 27 |
| 32731913-29523213-8028479 | 890-892 | 29523213 | denotes | 28 |
| 32731913-32283815-8028480 | 1294-1296 | 32283815 | denotes | 25 |