PMC:7464116 / 88599-89623 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T466","span":{"begin":41,"end":46},"obj":"Body_part"},{"id":"T467","span":{"begin":161,"end":167},"obj":"Body_part"},{"id":"T468","span":{"begin":670,"end":686},"obj":"Body_part"},{"id":"T469","span":{"begin":781,"end":787},"obj":"Body_part"}],"attributes":[{"id":"A466","pred":"fma_id","subj":"T466","obj":"http://purl.org/sig/ont/fma/fma63083"},{"id":"A467","pred":"fma_id","subj":"T467","obj":"http://purl.org/sig/ont/fma/fma7203"},{"id":"A468","pred":"fma_id","subj":"T468","obj":"http://purl.org/sig/ont/fma/fma16515"},{"id":"A469","pred":"fma_id","subj":"T469","obj":"http://purl.org/sig/ont/fma/fma7203"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T252","span":{"begin":41,"end":46},"obj":"Body_part"},{"id":"T253","span":{"begin":161,"end":167},"obj":"Body_part"},{"id":"T254","span":{"begin":670,"end":686},"obj":"Body_part"},{"id":"T255","span":{"begin":781,"end":787},"obj":"Body_part"}],"attributes":[{"id":"A252","pred":"uberon_id","subj":"T252","obj":"http://purl.obolibrary.org/obo/UBERON_0001977"},{"id":"A253","pred":"uberon_id","subj":"T253","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"A254","pred":"uberon_id","subj":"T254","obj":"http://purl.obolibrary.org/obo/UBERON_0001268"},{"id":"A255","pred":"uberon_id","subj":"T255","obj":"http://purl.obolibrary.org/obo/UBERON_0002113"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T828","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"T829","span":{"begin":161,"end":175},"obj":"Disease"},{"id":"T831","span":{"begin":235,"end":243},"obj":"Disease"},{"id":"T832","span":{"begin":258,"end":261},"obj":"Disease"},{"id":"T833","span":{"begin":318,"end":321},"obj":"Disease"},{"id":"T834","span":{"begin":345,"end":348},"obj":"Disease"},{"id":"T835","span":{"begin":458,"end":462},"obj":"Disease"},{"id":"T836","span":{"begin":643,"end":651},"obj":"Disease"},{"id":"T837","span":{"begin":643,"end":647},"obj":"Disease"}],"attributes":[{"id":"A828","pred":"mondo_id","subj":"T828","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A829","pred":"mondo_id","subj":"T829","obj":"http://purl.obolibrary.org/obo/MONDO_0001343"},{"id":"A830","pred":"mondo_id","subj":"T829","obj":"http://purl.obolibrary.org/obo/MONDO_0005240"},{"id":"A831","pred":"mondo_id","subj":"T831","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A832","pred":"mondo_id","subj":"T832","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A833","pred":"mondo_id","subj":"T833","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A834","pred":"mondo_id","subj":"T834","obj":"http://purl.obolibrary.org/obo/MONDO_0002492"},{"id":"A835","pred":"mondo_id","subj":"T835","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A836","pred":"mondo_id","subj":"T836","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A837","pred":"mondo_id","subj":"T837","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T989","span":{"begin":161,"end":167},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T990","span":{"begin":161,"end":167},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T991","span":{"begin":161,"end":167},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T992","span":{"begin":192,"end":193},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T993","span":{"begin":378,"end":379},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T994","span":{"begin":429,"end":430},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T995","span":{"begin":722,"end":723},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T996","span":{"begin":781,"end":787},"obj":"http://purl.obolibrary.org/obo/UBERON_0002113"},{"id":"T997","span":{"begin":781,"end":787},"obj":"http://www.ebi.ac.uk/efo/EFO_0000927"},{"id":"T998","span":{"begin":781,"end":787},"obj":"http://www.ebi.ac.uk/efo/EFO_0000929"},{"id":"T999","span":{"begin":813,"end":814},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T120","span":{"begin":47,"end":57},"obj":"Chemical"},{"id":"T40460","span":{"begin":591,"end":596},"obj":"Chemical"}],"attributes":[{"id":"A10612","pred":"chebi_id","subj":"T120","obj":"http://purl.obolibrary.org/obo/CHEBI_16737"},{"id":"A99832","pred":"chebi_id","subj":"T40460","obj":"http://purl.obolibrary.org/obo/CHEBI_24433"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-sentences","denotations":[{"id":"T537","span":{"begin":161,"end":234},"obj":"Sentence"},{"id":"T538","span":{"begin":235,"end":327},"obj":"Sentence"},{"id":"T539","span":{"begin":328,"end":405},"obj":"Sentence"},{"id":"T540","span":{"begin":406,"end":642},"obj":"Sentence"},{"id":"T541","span":{"begin":643,"end":780},"obj":"Sentence"},{"id":"T542","span":{"begin":781,"end":1024},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T345","span":{"begin":161,"end":175},"obj":"Phenotype"},{"id":"T346","span":{"begin":258,"end":261},"obj":"Phenotype"},{"id":"T347","span":{"begin":318,"end":321},"obj":"Phenotype"},{"id":"T348","span":{"begin":345,"end":348},"obj":"Phenotype"}],"attributes":[{"id":"A345","pred":"hp_id","subj":"T345","obj":"http://purl.obolibrary.org/obo/HP_0000112"},{"id":"A346","pred":"hp_id","subj":"T346","obj":"http://purl.obolibrary.org/obo/HP_0001919"},{"id":"A347","pred":"hp_id","subj":"T347","obj":"http://purl.obolibrary.org/obo/HP_0001919"},{"id":"A348","pred":"hp_id","subj":"T348","obj":"http://purl.obolibrary.org/obo/HP_0001919"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}

{"project":"LitCovid-PubTator","denotations":[{"id":"3246","span":{"begin":9,"end":17},"obj":"Species"},{"id":"3247","span":{"begin":244,"end":252},"obj":"Species"},{"id":"3248","span":{"begin":415,"end":423},"obj":"Species"},{"id":"3249","span":{"begin":643,"end":653},"obj":"Species"},{"id":"3250","span":{"begin":708,"end":716},"obj":"Species"},{"id":"3251","span":{"begin":799,"end":807},"obj":"Species"},{"id":"3252","span":{"begin":975,"end":983},"obj":"Species"},{"id":"3257","span":{"begin":47,"end":57},"obj":"Chemical"},{"id":"3286","span":{"begin":0,"end":8},"obj":"Disease"},{"id":"3287","span":{"begin":161,"end":175},"obj":"Disease"},{"id":"3288","span":{"begin":235,"end":243},"obj":"Disease"},{"id":"3289","span":{"begin":277,"end":286},"obj":"Disease"},{"id":"3290","span":{"begin":560,"end":569},"obj":"Disease"},{"id":"3291","span":{"begin":731,"end":740},"obj":"Disease"},{"id":"3292","span":{"begin":822,"end":831},"obj":"Disease"}],"attributes":[{"id":"A3246","pred":"tao:has_database_id","subj":"3246","obj":"Tax:9606"},{"id":"A3247","pred":"tao:has_database_id","subj":"3247","obj":"Tax:9606"},{"id":"A3248","pred":"tao:has_database_id","subj":"3248","obj":"Tax:9606"},{"id":"A3249","pred":"tao:has_database_id","subj":"3249","obj":"Tax:2697049"},{"id":"A3250","pred":"tao:has_database_id","subj":"3250","obj":"Tax:9606"},{"id":"A3251","pred":"tao:has_database_id","subj":"3251","obj":"Tax:9606"},{"id":"A3252","pred":"tao:has_database_id","subj":"3252","obj":"Tax:9606"},{"id":"A3257","pred":"tao:has_database_id","subj":"3257","obj":"MESH:D003404"},{"id":"A3286","pred":"tao:has_database_id","subj":"3286","obj":"MESH:C000657245"},{"id":"A3287","pred":"tao:has_database_id","subj":"3287","obj":"MESH:D007674"},{"id":"A3288","pred":"tao:has_database_id","subj":"3288","obj":"MESH:C000657245"},{"id":"A3289","pred":"tao:has_database_id","subj":"3289","obj":"MESH:D003643"},{"id":"A3290","pred":"tao:has_database_id","subj":"3290","obj":"MESH:D003643"},{"id":"A3291","pred":"tao:has_database_id","subj":"3291","obj":"MESH:D003643"},{"id":"A3292","pred":"tao:has_database_id","subj":"3292","obj":"MESH:D003643"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"COVID-19 patients with elevated baseline serum creatinine are more likely to be admitted to the intensive care unit and to undergo mechanical ventilation [106].\nKidney disease on admission is a higher risk of negative prognosis [106].\nCOVID-19 patients with AKI had ~5.3 times mortality risk higher than those without AKI [25].\nThe incidence of AKI in the overall cohort was in a range of 4.7–7.5% [8,15].\nDialysis patients have a higher rate of contracting SARS compared with the one of the general population, but both the degree of disease severity and the mortality rate of the dialysis group were similar to the general population [113].\nSARS-CoV-2 was detected in peritoneal fluid; peritoneal dialysis patients have a higher mortality rate than the general population [119].\nKidney transplant patients have a higher mortality rate than the general population; the clinical manifestations were similar to those reported for the general population, more than half of the patients were successfully discharged home [119]."}