PMC:7464116 / 87267-88131
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T452 | 30-35 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T453 | 79-83 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T454 | 163-167 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T455 | 204-216 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T456 | 537-543 | Body_part | denotes | kidney | http://purl.org/sig/ont/fma/fma7203 |
| T457 | 603-619 | Body_part | denotes | epithelial cells | http://purl.org/sig/ont/fma/fma66768 |
| T458 | 614-619 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T459 | 624-632 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T248 | 537-543 | Body_part | denotes | kidney | http://purl.obolibrary.org/obo/UBERON_0002113 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T811 | 0-8 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T812 | 0-4 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T813 | 339-347 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T814 | 339-343 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T815 | 385-393 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T816 | 474-482 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T817 | 474-478 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T818 | 583-591 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T819 | 583-587 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T820 | 633-647 | Disease | denotes | storm syndrome | http://purl.obolibrary.org/obo/MONDO_0008496 |
| T821 | 677-688 | Disease | denotes | hypotension | http://purl.obolibrary.org/obo/MONDO_0005468 |
| T822 | 690-704 | Disease | denotes | rhabdomyolysis | http://purl.obolibrary.org/obo/MONDO_0005290 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T972 | 30-35 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T973 | 44-45 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T974 | 79-83 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T975 | 163-167 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T976 | 247-250 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T977 | 486-488 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
| T978 | 537-543 | http://purl.obolibrary.org/obo/UBERON_0002113 | denotes | kidney |
| T979 | 537-543 | http://www.ebi.ac.uk/efo/EFO_0000927 | denotes | kidney |
| T980 | 537-543 | http://www.ebi.ac.uk/efo/EFO_0000929 | denotes | kidney |
| T981 | 603-613 | http://purl.obolibrary.org/obo/CL_0000066 | denotes | epithelial |
| T982 | 614-619 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T983 | 711-721 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activation |
| T984 | 789-790 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5253 | 204-216 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T121 | 711-740 | http://purl.obolibrary.org/obo/GO_0050820 | denotes | activation of the coagulation |
| T122 | 729-740 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | coagulation |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T528 | 194-355 | Sentence | denotes | The spike glycoprotein receptor binding domain (RBD) has biomolecular characteristics that are probably responsible for the greater diffusion of SARS-CoV-2 [42]. |
| T529 | 356-490 | Sentence | denotes | The renal damage observed in COVID-19 patients is the result of complex mechanisms induced directly and indirectly by SARS-CoV-2 [35]. |
| T530 | 491-656 | Sentence | denotes | The two main pathophysiological mechanisms of kidney damage are direct cytopathic effect of SARS-CoV-2 on renal epithelial cells and cytokine storm syndrome [64,71]. |
| T531 | 657-864 | Sentence | denotes | Hypoxia, persistent hypotension, rhabdomyolysis, over activation of the coagulation cascade and impairment of microcirculation play a role in the predisposition to the development of acute renal damage [64]. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T339 | 537-550 | Phenotype | denotes | kidney damage | http://purl.obolibrary.org/obo/HP_0000112 |
| T340 | 624-638 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
| T341 | 657-664 | Phenotype | denotes | Hypoxia | http://purl.obolibrary.org/obo/HP_0012418 |
| T342 | 677-688 | Phenotype | denotes | hypotension | http://purl.obolibrary.org/obo/HP_0002615 |
| T343 | 690-704 | Phenotype | denotes | rhabdomyolysis | http://purl.obolibrary.org/obo/HP_0003201 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 3171 | 537-550 | Disease | denotes | kidney damage | MESH:D007674 |
| 3238 | 177-184 | Gene | denotes | TMPRSS2 | Gene:7113 |
| 3241 | 0-10 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 3242 | 339-349 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 3243 | 394-402 | Species | denotes | patients | Tax:9606 |
| 3244 | 474-484 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 3245 | 583-593 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 3274 | 360-372 | Disease | denotes | renal damage | MESH:D007674 |
| 3275 | 385-393 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 3277 | 657-664 | Disease | denotes | Hypoxia | MESH:D000860 |
| 3278 | 677-688 | Disease | denotes | hypotension | MESH:D007022 |
| 3279 | 690-704 | Disease | denotes | rhabdomyolysis | MESH:D012206 |
| 3280 | 840-858 | Disease | denotes | acute renal damage | MESH:D058186 |