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PMC:7464116 / 41071-42284 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T297 206-212 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T298 270-275 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T299 351-357 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T129 206-212 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T130 270-275 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T131 351-357 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T438 52-61 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T439 76-85 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T440 346-357 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T441 374-388 Disease denotes conjunctivitis http://purl.obolibrary.org/obo/MONDO_0003799
T442 464-472 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T443 490-512 Disease denotes respiratory infections http://purl.obolibrary.org/obo/MONDO_0024355
T444 683-691 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T445 729-736 Disease denotes anosmia http://purl.obolibrary.org/obo/MONDO_0010528
T446 828-836 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T447 946-955 Disease denotes urticaria http://purl.obolibrary.org/obo/MONDO_0005492
T448 960-970 Disease denotes chickenpox http://purl.obolibrary.org/obo/MONDO_0005700
T449 999-1017 Disease denotes livedo reticularis http://purl.obolibrary.org/obo/MONDO_0044037
T450 1194-1202 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T451 1203-1212 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T577 270-275 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T578 864-866 http://purl.obolibrary.org/obo/CLO_0001527 denotes 94
T579 1019-1021 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T580 1061-1067 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digits

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T100 706-711 http://purl.obolibrary.org/obo/GO_0050909 denotes taste

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T244 0-284 Sentence denotes The most frequent serious clinical manifestation of infection appears to be pneumonia, which is primarily characterized by fever (which can even be absent), dry cough, fatigue, anorexia, myalgias, dyspnea, sputum production, and the presence of bilateral infiltrates on chest imaging.
T245 285-394 Sentence denotes Other reported symptoms can include the following: headache, sore throat, rhinorrhea and conjunctivitis [93].
T246 395-633 Sentence denotes However, no specific clinical features that can reliably distinguish COVID-19 from other viral respiratory infections have been reported, although development of dyspnea several days after the onset of initial symptoms is suggestive [25].
T247 634-757 Sentence denotes However, common symptoms in patients infected by COVID-19 are smell and taste disorders (e.g., anosmia and dysgeusia) [93].
T248 758-868 Sentence denotes Gastrointestinal symptoms (e.g., nausea, vomiting, abdominal pain and diarrhea) have also been described [94].
T249 869-1023 Sentence denotes There have been rare dermatological reports of erythematous rash, widespread urticaria and chickenpox-like vesicles and transient livedo reticularis [11].
T250 1024-1213 Sentence denotes Reddish-purple nodules on the distal digits similar in appearance to pernio (chilblains) have also been anecdotally described in children and young adults with suspected COVID-19 infection.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T150 76-85 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T151 123-128 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T152 157-166 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T153 168-175 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T154 177-185 Phenotype denotes anorexia http://purl.obolibrary.org/obo/HP_0002039
T155 187-195 Phenotype denotes myalgias http://purl.obolibrary.org/obo/HP_0003326
T156 197-204 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T157 336-344 Phenotype denotes headache http://purl.obolibrary.org/obo/HP_0002315
T158 346-357 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T159 359-369 Phenotype denotes rhinorrhea http://purl.obolibrary.org/obo/HP_0031417
T160 374-388 Phenotype denotes conjunctivitis http://purl.obolibrary.org/obo/HP_0000509
T161 490-512 Phenotype denotes respiratory infections http://purl.obolibrary.org/obo/HP_0011947
T162 557-564 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T163 729-736 Phenotype denotes anosmia http://purl.obolibrary.org/obo/HP_0000458
T164 741-750 Phenotype denotes dysgeusia http://purl.obolibrary.org/obo/HP_0031249
T165 791-807 Phenotype denotes nausea, vomiting http://purl.obolibrary.org/obo/HP_0002017
T166 809-823 Phenotype denotes abdominal pain http://purl.obolibrary.org/obo/HP_0002027
T167 828-836 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T168 929-933 Phenotype denotes rash http://purl.obolibrary.org/obo/HP_0000988
T169 946-955 Phenotype denotes urticaria http://purl.obolibrary.org/obo/HP_0001025
T170 999-1017 Phenotype denotes livedo reticularis http://purl.obolibrary.org/obo/HP_0000965
T171 1101-1111 Phenotype denotes chilblains http://purl.obolibrary.org/obo/HP_0009710

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1267 662-670 Species denotes patients Tax:9606
1268 1153-1161 Species denotes children Tax:9606
1269 52-61 Disease denotes infection MESH:D007239
1270 76-85 Disease denotes pneumonia MESH:D011014
1271 123-128 Disease denotes fever MESH:D005334
1272 157-166 Disease denotes dry cough MESH:D003371
1273 168-175 Disease denotes fatigue MESH:D005221
1274 177-185 Disease denotes anorexia MESH:D000855
1275 187-195 Disease denotes myalgias MESH:D063806
1276 197-204 Disease denotes dyspnea MESH:D004417
1277 336-344 Disease denotes headache MESH:D006261
1278 346-357 Disease denotes sore throat MESH:D010608
1279 359-388 Disease denotes rhinorrhea and conjunctivitis MESH:D003231
1280 464-472 Disease denotes COVID-19 MESH:C000657245
1281 484-512 Disease denotes viral respiratory infections
1282 557-564 Disease denotes dyspnea MESH:D004417
1283 671-679 Disease denotes infected MESH:D007239
1284 683-691 Disease denotes COVID-19 MESH:C000657245
1285 706-721 Disease denotes taste disorders MESH:D013651
1286 729-750 Disease denotes anosmia and dysgeusia MESH:D004408
1287 758-783 Disease denotes Gastrointestinal symptoms MESH:D012817
1288 791-797 Disease denotes nausea MESH:D009325
1289 799-807 Disease denotes vomiting MESH:D014839
1290 809-823 Disease denotes abdominal pain MESH:D015746
1291 828-836 Disease denotes diarrhea MESH:D003967
1292 916-933 Disease denotes erythematous rash MESH:D005076
1293 946-955 Disease denotes urticaria MESH:D014581
1294 1194-1202 Disease denotes COVID-19 MESH:C000657245
1295 1203-1212 Disease denotes infection MESH:D007239

2_test

Id Subject Object Predicate Lexical cue
32759645-32213556-58096226 864-866 32213556 denotes 94
32759645-32312654-58096227 1019-1021 32312654 denotes 11