PMC:7464116 / 14345-14983
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T34 | 296-304 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T35 | 389-392 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T36 | 403-406 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T180 | 50-58 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T181 | 50-54 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T182 | 136-144 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T183 | 136-140 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T184 | 184-192 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T185 | 184-188 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T186 | 231-239 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T187 | 231-235 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T188 | 483-491 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T189 | 483-487 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T190 | 496-504 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T191 | 496-500 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T192 | 587-595 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T193 | 587-591 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T194 | 600-608 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T195 | 600-604 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T179 | 195-198 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T180 | 199-200 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T181 | 515-517 | http://purl.obolibrary.org/obo/CLO_0053794 | denotes | 41 |
| T182 | 611-614 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T6 | 296-304 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6 | 335-345 | http://purl.obolibrary.org/obo/GO_0004175 | denotes | proteinase |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T92 | 0-158 | Sentence | denotes | To understand the pathophysiological mechanism of SARS-CoV-2, its genomic sequence was compared to the other two similar coronaviruses, SARS-CoV and MERS-CoV. |
| T93 | 159-270 | Sentence | denotes | In fact, it emerged that SARS-CoV-2 has a sequence identity of 79% with SARS-CoV and 50% with MERS-CoV [37,40]. |
| T94 | 271-519 | Sentence | denotes | Upon analysis of certain proteins, such as the coronavirus main proteinase (3CLpro), papain-like protease (PLpro) and RNA-dependent RNA polymerase (RdRp), it was observed that the sequence identity value between SARS-CoV and SARS-CoV-2 is 96% [41]. |
| T95 | 520-638 | Sentence | denotes | Therefore, an analogy between the physiopathological mechanisms of SARS-CoV and SARS-CoV-2 has been hypothesized [42]. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 490 | 50-60 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 491 | 121-134 | Species | denotes | coronaviruses | Tax:11118 |
| 492 | 136-144 | Species | denotes | SARS-CoV | Tax:694009 |
| 493 | 149-157 | Species | denotes | MERS-CoV | Tax:1335626 |
| 494 | 184-194 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 495 | 231-239 | Species | denotes | SARS-CoV | Tax:694009 |
| 496 | 253-261 | Species | denotes | MERS-CoV | Tax:1335626 |
| 497 | 318-329 | Species | denotes | coronavirus | Tax:11118 |
| 498 | 483-491 | Species | denotes | SARS-CoV | Tax:694009 |
| 499 | 496-506 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 500 | 587-595 | Species | denotes | SARS-CoV | Tax:694009 |
| 501 | 600-610 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32759645-32007145-58096164 | 263-265 | 32007145 | denotes | 37 |
| 32759645-32035028-58096165 | 266-268 | 32035028 | denotes | 40 |
| 32759645-32022370-58096166 | 515-517 | 32022370 | denotes | 41 |