
PMC:7463108 / 87506-92834
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T842 | 56-60 | Body_part | denotes | Glia | http://purl.org/sig/ont/fma/fma54541 |
T843 | 110-118 | Body_part | denotes | tyrosine | http://purl.org/sig/ont/fma/fma82768 |
T844 | 237-241 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T845 | 357-360 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T846 | 370-374 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T847 | 449-460 | Body_part | denotes | lymphocytes | http://purl.org/sig/ont/fma/fma62863 |
T848 | 521-524 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T849 | 783-788 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
T850 | 906-913 | Body_part | denotes | neurons | http://purl.org/sig/ont/fma/fma54527 |
T851 | 997-1000 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T852 | 1078-1085 | Body_part | denotes | neurons | http://purl.org/sig/ont/fma/fma54527 |
T853 | 1110-1141 | Body_part | denotes | glial fibrillary acidic protein | http://purl.org/sig/ont/fma/fma63860 |
T854 | 1143-1147 | Body_part | denotes | GFAP | http://purl.org/sig/ont/fma/fma67326|http://purl.org/sig/ont/fma/fma63860 |
T856 | 1172-1182 | Body_part | denotes | astrocytes | http://purl.org/sig/ont/fma/fma54537 |
T857 | 1338-1342 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T858 | 1380-1383 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T859 | 1457-1461 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T860 | 1496-1500 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T861 | 1826-1830 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T862 | 1845-1852 | Body_part | denotes | neurons | http://purl.org/sig/ont/fma/fma54527 |
T863 | 2506-2510 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T864 | 2594-2598 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T865 | 2771-2780 | Body_part | denotes | microglia | http://purl.org/sig/ont/fma/fma68923 |
T866 | 2846-2850 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T867 | 2958-2962 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T868 | 3146-3150 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T869 | 3281-3285 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T870 | 4281-4284 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T871 | 5083-5086 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T872 | 5095-5099 | Body_part | denotes | glia | http://purl.org/sig/ont/fma/fma54541 |
T873 | 5172-5181 | Body_part | denotes | chemokine | http://purl.org/sig/ont/fma/fma241981 |
T874 | 5255-5258 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T170 | 1354-1359 | Body_part | denotes | scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T198 | 4916-4941 | Disease | denotes | neurodegenerative disease | http://purl.obolibrary.org/obo/MONDO_0005559 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T907 | 100-109 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activates |
T908 | 135-136 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
T909 | 228-241 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activate cell |
T910 | 370-374 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T911 | 714-718 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T912 | 783-788 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
T913 | 850-851 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T914 | 1094-1095 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
T915 | 1172-1182 | http://purl.obolibrary.org/obo/CL_0000127 | denotes | astrocytes |
T916 | 1237-1238 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T917 | 1250-1251 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T918 | 1338-1342 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T919 | 1374-1375 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T920 | 1376-1377 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T921 | 1626-1630 | http://purl.obolibrary.org/obo/CLO_0001545 | denotes | a 72 |
T922 | 2343-2347 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T923 | 2771-2780 | http://purl.obolibrary.org/obo/CL_0000129 | denotes | microglia |
T924 | 2846-2850 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T925 | 4359-4368 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
T926 | 4426-4427 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T927 | 4499-4503 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T928 | 4507-4508 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T929 | 4509-4510 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T930 | 4627-4631 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T931 | 4758-4761 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T932 | 4977-4981 | http://purl.obolibrary.org/obo/CLO_0001185 | denotes | 2018 |
T933 | 5070-5079 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signaling |
T934 | 5103-5104 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T935 | 5262-5263 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T37512 | 110-118 | Chemical | denotes | tyrosine | http://purl.obolibrary.org/obo/CHEBI_18186 |
T67699 | 389-397 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T334 | 679-687 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T85477 | 810-818 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T68690 | 1011-1019 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T74954 | 1134-1141 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T30670 | 1394-1402 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T20723 | 1582-1590 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T15211 | 1704-1712 | Chemical | denotes | naloxone | http://purl.obolibrary.org/obo/CHEBI_7459 |
T22372 | 1730-1738 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T96389 | 1980-1988 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T350 | 2032-2040 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T37556 | 2160-2168 | Chemical | denotes | naloxone | http://purl.obolibrary.org/obo/CHEBI_7459 |
T353 | 2252-2260 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T17637 | 2476-2478 | Chemical | denotes | Co | http://purl.obolibrary.org/obo/CHEBI_27638 |
T37828 | 2982-2990 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T7043 | 3221-3229 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T89089 | 3445-3453 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T362 | 3714-3722 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T6684 | 3830-3838 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T61446 | 3976-3984 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T49943 | 4086-4094 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T370 | 4718-4720 | Chemical | denotes | CC | http://purl.obolibrary.org/obo/CHEBI_28940 |
T17030 | 4845-4853 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
3011 | 16-20 | Gene | denotes | BDNF | Gene:627 |
3012 | 22-27 | Gene | denotes | mBDNF | Gene:12064 |
3013 | 41-45 | Gene | denotes | CCR5 | Gene:1234 |
3108 | 970-974 | Gene | denotes | CCR5 | Gene:1234 |
3109 | 979-983 | Gene | denotes | BDNF | Gene:627 |
3110 | 1110-1141 | Gene | denotes | glial fibrillary acidic protein | Gene:2670 |
3111 | 1143-1147 | Gene | denotes | GFAP | Gene:2670 |
3112 | 1212-1229 | Gene | denotes | μ-opioid receptor | Gene:4988 |
3113 | 1231-1234 | Gene | denotes | MOR | Gene:4988 |
3114 | 1244-1248 | Gene | denotes | CCR5 | Gene:1234 |
3115 | 1386-1389 | Gene | denotes | Tat | Gene:6898 |
3116 | 1436-1440 | Gene | denotes | CCR5 | Gene:1234 |
3117 | 1501-1504 | Gene | denotes | MSN | Gene:4478 |
3118 | 1518-1521 | Gene | denotes | Tat | Gene:6898 |
3119 | 1600-1603 | Gene | denotes | Tat | Gene:6898 |
3120 | 1680-1683 | Gene | denotes | Tat | Gene:6898 |
3121 | 1866-1869 | Gene | denotes | Tat | Gene:6898 |
3122 | 2094-2097 | Gene | denotes | Tat | Gene:6898 |
3123 | 2277-2280 | Gene | denotes | MOR | Gene:4988 |
3124 | 2533-2537 | Gene | denotes | CCR5 | Gene:1234 |
3125 | 2568-2572 | Gene | denotes | CCR5 | Gene:1234 |
3126 | 2604-2608 | Gene | denotes | CCR5 | Gene:1234 |
3127 | 2658-2662 | Gene | denotes | BDNF | Gene:627 |
3128 | 2678-2682 | Gene | denotes | BDNF | Gene:627 |
3129 | 2731-2735 | Gene | denotes | BDNF | Gene:627 |
3130 | 2782-2787 | Gene | denotes | mBDNF | Gene:12064 |
3131 | 2858-2863 | Gene | denotes | mBDNF | Gene:12064 |
3132 | 2872-2876 | Gene | denotes | BDNF | Gene:627 |
3133 | 2976-2979 | Gene | denotes | Tat | Gene:6898 |
3134 | 3023-3027 | Gene | denotes | BDNF | Gene:627 |
3135 | 3032-3037 | Gene | denotes | mBDNF | Gene:12064 |
3136 | 3068-3072 | Gene | denotes | BDNF | Gene:627 |
3137 | 3073-3078 | Gene | denotes | mBDNF | Gene:12064 |
3138 | 3136-3140 | Gene | denotes | CCR5 | Gene:1234 |
3139 | 3258-3262 | Gene | denotes | BDNF | Gene:627 |
3140 | 3355-3359 | Gene | denotes | BDNF | Gene:627 |
3141 | 3360-3365 | Gene | denotes | mBDNF | Gene:12064 |
3142 | 3486-3490 | Gene | denotes | BDNF | Gene:627 |
3143 | 3491-3496 | Gene | denotes | mBDNF | Gene:12064 |
3144 | 3638-3642 | Gene | denotes | CCR5 | Gene:1234 |
3145 | 3664-3669 | Gene | denotes | mBDNF | Gene:12064 |
3146 | 3706-3709 | Gene | denotes | Tat | Gene:6898 |
3147 | 3761-3764 | Gene | denotes | MSN | Gene:4478 |
3148 | 3805-3808 | Gene | denotes | Tat | Gene:6898 |
3149 | 3880-3883 | Gene | denotes | Tat | Gene:6898 |
3150 | 3922-3925 | Gene | denotes | Tat | Gene:6898 |
3151 | 4017-4022 | Gene | denotes | mBDNF | Gene:12064 |
3152 | 4078-4081 | Gene | denotes | Tat | Gene:6898 |
3153 | 4177-4180 | Gene | denotes | Tat | Gene:6898 |
3154 | 4263-4267 | Gene | denotes | CCR5 | Gene:1234 |
3155 | 4377-4380 | Gene | denotes | MOR | Gene:4988 |
3156 | 4395-4399 | Gene | denotes | CCR5 | Gene:1234 |
3157 | 4413-4416 | Gene | denotes | MOR | Gene:4988 |
3158 | 4428-4432 | Gene | denotes | BDNF | Gene:627 |
3159 | 3795-3800 | Gene | denotes | mBDNF | Gene:12064 |
3160 | 2695-2700 | Gene | denotes | mBDNF | Gene:12064 |
3161 | 2109-2112 | Gene | denotes | MSN | Gene:4478 |
3162 | 3822-3825 | Gene | denotes | Tat | Gene:6898 |
3163 | 3437-3440 | Gene | denotes | Tat | Gene:6898 |
3164 | 2184-2187 | Gene | denotes | Tat | Gene:6898 |
3165 | 1003-1006 | Gene | denotes | Tat | Gene:6898 |
3166 | 997-1002 | Species | denotes | HIV-1 | Tax:11676 |
3167 | 1380-1385 | Species | denotes | HIV-1 | Tax:11676 |
3168 | 4281-4286 | Species | denotes | HIV-1 | Tax:11676 |
3169 | 1011-1019 | Chemical | denotes | morphine | MESH:D009020 |
3170 | 1394-1402 | Chemical | denotes | morphine | MESH:D009020 |
3171 | 1582-1590 | Chemical | denotes | morphine | MESH:D009020 |
3172 | 1704-1712 | Chemical | denotes | naloxone | MESH:D009270 |
3173 | 1718-1726 | Chemical | denotes | Naloxone | MESH:D009270 |
3174 | 1730-1738 | Chemical | denotes | morphine | MESH:D009020 |
3175 | 1980-1988 | Chemical | denotes | morphine | MESH:D009020 |
3176 | 2032-2040 | Chemical | denotes | morphine | MESH:D009020 |
3177 | 2160-2168 | Chemical | denotes | naloxone | MESH:D009270 |
3178 | 2252-2260 | Chemical | denotes | morphine | MESH:D009020 |
3179 | 2982-2990 | Chemical | denotes | morphine | MESH:D009020 |
3180 | 3221-3229 | Chemical | denotes | morphine | MESH:D009020 |
3181 | 3445-3453 | Chemical | denotes | morphine | MESH:D009020 |
3182 | 3714-3722 | Chemical | denotes | morphine | MESH:D009020 |
3183 | 3830-3838 | Chemical | denotes | morphine | MESH:D009020 |
3184 | 3976-3984 | Chemical | denotes | morphine | MESH:D009020 |
3185 | 4086-4094 | Chemical | denotes | morphine | MESH:D009020 |
3186 | 1040-1052 | Disease | denotes | cytotoxicity | MESH:D064420 |
3187 | 1525-1535 | Disease | denotes | neurotoxic | MESH:D020258 |
3188 | 1612-1620 | Disease | denotes | toxicity | MESH:D064420 |
3189 | 1813-1830 | Disease | denotes | CCR5-deficit glia | MESH:D009461 |
3190 | 1952-1960 | Disease | denotes | toxicity | MESH:D064420 |
3191 | 2188-2196 | Disease | denotes | toxicity | MESH:D064420 |
3192 | 2354-2364 | Disease | denotes | neurotoxic | MESH:D020258 |
3193 | 2382-2401 | Disease | denotes | CCR5-deficient MSNs | MESH:D007153 |
3194 | 2851-2856 | Disease | denotes | death | MESH:D003643 |
3195 | 2937-2962 | Disease | denotes | CCR5-deficient mixed glia | MESH:D060085 |
3196 | 3266-3285 | Disease | denotes | CCR5-deficient glia | MESH:D007153 |
3197 | 3548-3563 | Disease | denotes | CCR5 deficiency | MESH:D007153 |
3198 | 3894-3904 | Disease | denotes | neurotoxic | MESH:D020258 |
3199 | 4095-4103 | Disease | denotes | toxicity | MESH:D064420 |
3200 | 4291-4308 | Disease | denotes | opiate neurotoxic | MESH:D020258 |
3201 | 4332-4347 | Disease | denotes | CCR5 deficiency | MESH:D007153 |
3223 | 87-91 | Gene | denotes | BDNF | Gene:627 |
3224 | 93-98 | Gene | denotes | mBDNF | Gene:12064 |
3225 | 138-142 | Gene | denotes | TrkB | Gene:4915 |
3226 | 191-195 | Gene | denotes | BDNF | Gene:627 |
3227 | 201-205 | Gene | denotes | BDNF | Gene:627 |
3228 | 213-219 | Gene | denotes | p75NTR | Gene:4804 |
3229 | 334-338 | Gene | denotes | BDNF | Gene:627 |
3230 | 430-434 | Gene | denotes | BDNF | Gene:627 |
3231 | 527-532 | Gene | denotes | gp120 | Gene:3700 |
3232 | 568-573 | Gene | denotes | mBDNF | Gene:12064 |
3233 | 628-632 | Gene | denotes | CCR5 | Gene:1234 |
3234 | 673-676 | Gene | denotes | Tat | Gene:6898 |
3235 | 802-805 | Gene | denotes | Tat | Gene:6898 |
3236 | 873-878 | Gene | denotes | mBDNF | Gene:12064 |
3237 | 921-925 | Gene | denotes | CCR5 | Gene:1234 |
3238 | 563-567 | Gene | denotes | BDNF | Gene:627 |
3239 | 521-526 | Species | denotes | HIV-1 | Tax:11676 |
3240 | 810-818 | Chemical | denotes | morphine | MESH:D009020 |
3241 | 242-247 | Disease | denotes | death | MESH:D003643 |
3242 | 357-369 | Disease | denotes | HIV-infected | MESH:D015658 |
3243 | 730-745 | Disease | denotes | CCR5-deficiency | MESH:D007153 |
3256 | 4839-4842 | Gene | denotes | Tat | Gene:6898 |
3257 | 5036-5040 | Gene | denotes | CCR5 | Gene:1234 |
3258 | 5066-5069 | Gene | denotes | MOR | Gene:4988 |
3259 | 5105-5109 | Gene | denotes | BDNF | Gene:627 |
3260 | 5206-5209 | Gene | denotes | MOR | Gene:4988 |
3261 | 5214-5218 | Gene | denotes | CCR5 | Gene:1234 |
3262 | 4742-4747 | Gene | denotes | mBDNF | Gene:12064 |
3263 | 5083-5086 | Species | denotes | HIV | Tax:12721 |
3264 | 5255-5258 | Species | denotes | HIV | Tax:12721 |
3265 | 4845-4853 | Chemical | denotes | morphine | MESH:D009020 |
3266 | 4809-4830 | Disease | denotes | glial CCR5 deficiency | MESH:D005910 |
3267 | 4916-4941 | Disease | denotes | neurodegenerative disease | MESH:D019636 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T171 | 237-247 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
T172 | 1770-1787 | http://purl.obolibrary.org/obo/GO_0043524 | denotes | neuronal survival |
T173 | 2835-2856 | http://purl.obolibrary.org/obo/GO_0012501 | denotes | programmed cell death |
T174 | 2846-2856 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
T175 | 4359-4368 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
T176 | 4469-4486 | http://purl.obolibrary.org/obo/GO_0043524 | denotes | neuronal survival |
T177 | 4786-4798 | http://purl.obolibrary.org/obo/GO_0043066 | denotes | pro-survival |
T178 | 5070-5079 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1157 | 0-79 | Sentence | denotes | Enhanced Mature BDNF (mBDNF) Produced by CCR5 Deficient Glia is Neuroprotective |
T1158 | 80-257 | Sentence | denotes | Mature BDNF (mBDNF) activates tyrosine receptor kinase B (TrkB) and is neuroprotective, while the precursor to BDNF, pro-BDNF, binds p75NTR and can activate cell death pathways. |
T1159 | 258-414 | Sentence | denotes | Based on findings of significant, reversible reductions in glially produced BDNF after exposure to HIV-infected cell supernatant ± morphine (Masvekar et al. |
T1160 | 415-487 | Sentence | denotes | 2014), altered BDNF processing in lymphocytes from PWH (Avdoshina et al. |
T1161 | 488-547 | Sentence | denotes | 2011), and following exposure to HIV-1 gp120 (Bachis et al. |
T1162 | 548-713 | Sentence | denotes | 2012), the pro-BDNF:mBDNF ratio was analyzed in supernatants from wild-type vs. CCR5-null striatal glial cultures exposed to Tat ± morphine for 6 or 24 h (Kim et al. |
T1163 | 714-729 | Sentence | denotes | 2018) (Fig. 6). |
T1164 | 730-954 | Sentence | denotes | CCR5-deficiency reduced this ratio by over 2-fold in cells treated with Tat and morphine after 6 h (Fig. 6), indicating a relative increase in mBDNF that may partially protect neurons in the CCR5-deficient glial environment. |
T1165 | 955-1093 | Sentence | denotes | Fig. 6 Role of CCR5 and BDNF in mediating HIV-1 Tat and morphine-induced interactive cytotoxicity in striatal medium spiny neurons (MSNs). |
T1166 | 1094-1379 | Sentence | denotes | A proportion of glial fibrillary acidic protein (GFAP)-immunolabeled striatal astrocytes display punctate patterns of μ-opioid receptor (MOR) (a) and CCR5 (b) (43.8 ± 2.4%) immunofluorescence—with some faint immunoreactivity extending into the cell processes; scale bars = 10 μm (a-b). |
T1167 | 1380-1468 | Sentence | denotes | HIV-1 Tat and morphine are no longer toxic to MSNs when CCR5 is deleted from glia (c-f). |
T1168 | 1469-1717 | Sentence | denotes | In C57BL/J wild-type mixed glia-MSN co-cultures, Tat is neurotoxic (*p = 0.001 vs. controls), and co-exposure to morphine enhanced Tat-induced toxicity over a 72-h period (**p < 0.001 vs. controls, p < 0.05 vs. Tat) and antagonized by naloxone (c). |
T1169 | 1718-1792 | Sentence | denotes | Naloxone or morphine by themselves had no effect on neuronal survival (c). |
T1170 | 1793-2017 | Sentence | denotes | In co-cultures with CCR5-deficit glia and wild-type neurons, exposure to Tat by itself is significantly toxic (*p < 0.001 vs. controls); however, the enhanced toxicity seen with combined morphine exposure was eliminated (d). |
T1171 | 2018-2140 | Sentence | denotes | Unexpectedly, morphine co-treatment entirely abolished the toxic effects of Tat, restoring MSN survival to control levels. |
T1172 | 2141-2342 | Sentence | denotes | Pre-treatment with naloxone re-established Tat toxicity, suggesting that the paradoxical protective effects of morphine are mediated by MOR (or perhaps another opioid receptor type) (d) (see Kim et al. |
T1173 | 2343-2349 | Sentence | denotes | 2018). |
T1174 | 2350-2475 | Sentence | denotes | The neurotoxic patterns seen in CCR5-deficient MSNs and wild-type glial co-cultures are similar to wild-type co-cultures (e). |
T1175 | 2476-2603 | Sentence | denotes | Co-cultures in which MSNs and glia are both deficient in CCR5 are similar to those in which CCR5 is only deficient in glia (f). |
T1176 | 2604-2730 | Sentence | denotes | CCR5 deletion alters the expression and processing of BDNF precursor (pro-BDNF) to mature (mBDNF) by mixed-glial cultures (g). |
T1177 | 2731-3045 | Sentence | denotes | BDNF is expressed by both astroglia and microglia; mBDNF is neuroprotective, while pro-BDNF can promote programmed cell death. mBDNF and pro-BDNF levels were analyzed in conditioned media from wild-type or CCR5-deficient mixed glia treated with Tat ± morphine after 6 h or 24 h to assess pro-BDNF and mBDNF levels. |
T1178 | 3046-3211 | Sentence | denotes | The proportion of pro-BDNF/mBDNF levels was significantly higher in wild-type compared to CCR5-null glia at 24 h (lower row; g), suggesting reduced neuronal support. |
T1179 | 3212-3414 | Sentence | denotes | Although morphine significantly decreased pro-BDNF in CCR5-deficient glia at both 6 h and 24 h compared to control levels (not shown), the pro-BDNF/mBDNF ratios were unaltered (upper and lower rows; g). |
T1180 | 3415-3653 | Sentence | denotes | By contrast, combined Tat and morphine significantly decreased the pro-BDNF/mBDNF ratio at 6 h, suggesting transient protection with CCR5 deficiency that was not fully sustained at 24 h (p = 0.17) (*p < 0.05, wild-type vs. CCR5-null) (g). |
T1181 | 3654-3737 | Sentence | denotes | Exogenous mBDNF is neuroprotective against combined Tat and morphine treatment (h). |
T1182 | 3738-3879 | Sentence | denotes | Wild-type, mixed glial-MSN co-cultures were treated with mBDNF and Tat, or combined Tat and morphine (represented by dotted survival curves). |
T1183 | 3880-4000 | Sentence | denotes | Tat alone was neurotoxic (*p < 0.05), and Tat was significantly worsened by co-exposing MSNs to morphine (**p < 0.0001). |
T1184 | 4001-4194 | Sentence | denotes | The addition of mBDNF (50 ng/ml; 72 h) fully protected MSNs against combined Tat and morphine toxicity, but only tended to protect (albeit not significantly) MSNs treated with Tat alone (#)(h). |
T1185 | 4195-4498 | Sentence | denotes | Overall, the results in c-h suggest (1) an important role for glial CCR5 in mediating HIV-1 and opiate neurotoxic interactions, (2) that CCR5 deficiency influences signaling through MOR, and (3) that CCR5 (and perhaps MOR) act via a BDNF intermediary to promote or obstruct neuronal survival (Kim et al. |
T1186 | 4499-4731 | Sentence | denotes | 2018). (a-b) Modified and reprinted with permission from Podhaizer et al. (2012). (c-h) Modified and reprinted from Kim et al. (2018), which is an open access article distributed under the terms of the Creative Commons CC BY license |
T1187 | 4732-4960 | Sentence | denotes | Exogenous mBDNF treatment has been found to mimic the pro-survival effect of glial CCR5 deficiency against Tat ± morphine, and its neuroprotective effects have been supported in other neurodegenerative disease models (Cai et al. |
T1188 | 4961-4976 | Sentence | denotes | 2014; Xu et al. |
T1189 | 4977-4983 | Sentence | denotes | 2018). |
T1190 | 4984-5127 | Sentence | denotes | Collectively, the findings suggest that the loss of CCR5 may fundamentally change MOR signaling in HIV-exposed glia in a BDNF-dependent manner. |
T1191 | 5128-5328 | Sentence | denotes | Thus, overall the interaction of opioid and chemokine receptors, specifically MOR and CCR5, may alter the neuropathogenesis of HIV in a qualitatively unique manner not seen with either disorder alone. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T61 | 4916-4941 | Phenotype | denotes | neurodegenerative disease | http://purl.obolibrary.org/obo/HP_0002180 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32876803-24949623-62958291 | 415-419 | 24949623 | denotes | 2014 |
32876803-21422985-62958292 | 488-492 | 21422985 | denotes | 2011 |
32876803-22787033-62958293 | 548-552 | 22787033 | denotes | 2012 |
32876803-22101471-62958294 | 4574-4578 | 22101471 | denotes | 2012 |
32876803-24818146-62958295 | 4961-4965 | 24818146 | denotes | 2014 |
32876803-30323150-62958296 | 4977-4981 | 30323150 | denotes | 2018 |