PMC:7463108 / 76934-77997
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T742 | 84-87 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T743 | 204-207 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T744 | 246-250 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T745 | 316-320 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T746 | 387-390 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T747 | 618-627 | Body_part | denotes | chemokine | http://purl.org/sig/ont/fma/fma241981 |
| T748 | 694-697 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
| T749 | 882-886 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
| T750 | 913-916 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T179 | 355-364 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T180 | 375-377 | Disease | denotes | R5 | http://purl.obolibrary.org/obo/MONDO_0016654 |
| T181 | 481-490 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T809 | 32-33 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T810 | 246-250 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T811 | 316-320 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
| T812 | 882-886 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T32848 | 662-669 | Chemical | denotes | ligands | http://purl.obolibrary.org/obo/CHEBI_52214 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 2625 | 195-199 | Gene | denotes | CCR5 | Gene:1234 |
| 2626 | 311-315 | Gene | denotes | CCR5 | Gene:1234 |
| 2627 | 368-372 | Gene | denotes | CCR5 | Gene:1234 |
| 2628 | 589-593 | Gene | denotes | CCR5 | Gene:1234 |
| 2629 | 721-725 | Gene | denotes | CCR2 | Gene:729230 |
| 2631 | 821-827 | Gene | denotes | CXCL12 | Gene:6387 |
| 2632 | 84-87 | Species | denotes | HIV | Tax:12721 |
| 2633 | 204-207 | Species | denotes | HIV | Tax:12721 |
| 2634 | 387-390 | Species | denotes | HIV | Tax:12721 |
| 2635 | 694-697 | Species | denotes | HIV | Tax:12721 |
| 2636 | 913-916 | Species | denotes | HIV | Tax:12721 |
| 2637 | 355-364 | Disease | denotes | infection | MESH:D007239 |
| 2638 | 481-490 | Disease | denotes | infection | MESH:D007239 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1049 | 0-176 | Sentence | denotes | Host genetic variability can be a major determinant in individual susceptibility to HIV infectivity and may influence neuroHIV progression in the context of opiate co-exposure. |
| T1050 | 177-272 | Sentence | denotes | The importance of CCR5 for HIV infectivity and polymorphisms in this gene are well established. |
| T1051 | 273-535 | Sentence | denotes | Individuals who are homozygous in the CCR5 gene (CCR5Δ32) are highly resistant to infection by CCR5- (R5-) tropic HIV as demonstrated by individuals heterozygous for CCR5Δ32 who display partial resistance to infection and slower disease progression (Huang et al. |
| T1052 | 536-552 | Sentence | denotes | 1996; Liu et al. |
| T1053 | 553-573 | Sentence | denotes | 1996; van Rij et al. |
| T1054 | 574-580 | Sentence | denotes | 1999). |
| T1055 | 581-739 | Sentence | denotes | Besides CCR5, polymorphisms of other chemokine co-receptors and/or their cognate ligands have been implicated in HIV infectivity, including CCR2 (Smith et al. |
| T1056 | 740-762 | Sentence | denotes | 1997; Kostrikis et al. |
| T1057 | 763-786 | Sentence | denotes | 1998), CCL5 (Liu et al. |
| T1058 | 787-809 | Sentence | denotes | 1999; McDermott et al. |
| T1059 | 810-843 | Sentence | denotes | 2000), and CXCL12 (Winkler et al. |
| T1060 | 844-850 | Sentence | denotes | 1998). |
| T1061 | 851-1056 | Sentence | denotes | Authoritative reviews on other gene polymorphisms that modify HIV infectivity and disease progression have been published (Lama and Planelles 2007; Singh and Spector 2009; Chatterjee 2010; Aouizerat et al. |
| T1062 | 1057-1063 | Sentence | denotes | 2011). |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32876803-8898752-62958247 | 536-540 | 8898752 | denotes | 1996 |
| 32876803-8756719-62958248 | 553-557 | 8756719 | denotes | 1996 |
| 32876803-9252328-62958249 | 740-744 | 9252328 | denotes | 1997 |
| 32876803-9500612-62958250 | 763-767 | 9500612 | denotes | 1998 |
| 32876803-10200305-62958251 | 787-791 | 10200305 | denotes | 1999 |
| 32876803-11125885-62958252 | 810-814 | 11125885 | denotes | 2000 |
| 32876803-9430590-62958253 | 844-848 | 9430590 | denotes | 1998 |
| 32876803-17651505-62958254 | 993-997 | 17651505 | denotes | 2007 |
| 32876803-19190524-62958255 | 1017-1021 | 19190524 | denotes | 2009 |
| 32876803-20505255-62958256 | 1034-1038 | 20505255 | denotes | 2010 |
| 32876803-21221856-62958257 | 1057-1061 | 21221856 | denotes | 2011 |