PMC:7463108 / 55482-59484
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T541 | 22-27 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T542 | 42-58 | Body_part | denotes | endothelial cell | http://purl.org/sig/ont/fma/fma66772 |
T543 | 54-58 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T544 | 70-79 | Body_part | denotes | astrocyte | http://purl.org/sig/ont/fma/fma54537 |
T545 | 189-192 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T546 | 411-427 | Body_part | denotes | zonula occludens | http://purl.org/sig/ont/fma/fma67397 |
T547 | 508-515 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T548 | 686-689 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T549 | 904-909 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T550 | 1015-1020 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T551 | 1181-1188 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
T552 | 1436-1439 | Body_part | denotes | CNS | http://purl.org/sig/ont/fma/fma55675 |
T553 | 1523-1531 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T554 | 1566-1571 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T555 | 1591-1594 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T556 | 1653-1658 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T557 | 1794-1799 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T558 | 2569-2580 | Body_part | denotes | vasculature | http://purl.org/sig/ont/fma/fma69050 |
T559 | 2590-2608 | Body_part | denotes | perivascular space | http://purl.org/sig/ont/fma/fma323243|http://purl.org/sig/ont/fma/fma323272 |
T561 | 2616-2626 | Body_part | denotes | parenchyma | http://purl.org/sig/ont/fma/fma45732 |
T562 | 2634-2642 | Body_part | denotes | striatum | http://purl.org/sig/ont/fma/fma77618 |
T563 | 2721-2727 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T564 | 2788-2792 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T565 | 2925-2943 | Body_part | denotes | perivascular space | http://purl.org/sig/ont/fma/fma323243|http://purl.org/sig/ont/fma/fma323272 |
T567 | 2944-2954 | Body_part | denotes | parenchyma | http://purl.org/sig/ont/fma/fma45732 |
T568 | 3018-3027 | Body_part | denotes | left-hand | http://purl.org/sig/ont/fma/fma9714 |
T569 | 3120-3131 | Body_part | denotes | capillaries | http://purl.org/sig/ont/fma/fma63194 |
T570 | 3132-3154 | Body_part | denotes | post-capillary venules | http://purl.org/sig/ont/fma/fma63191 |
T571 | 3137-3146 | Body_part | denotes | capillary | http://purl.org/sig/ont/fma/fma63194 |
T572 | 3256-3268 | Body_part | denotes | blood vessel | http://purl.org/sig/ont/fma/fma63183 |
T573 | 3349-3361 | Body_part | denotes | white matter | http://purl.org/sig/ont/fma/fma83929 |
T574 | 3380-3388 | Body_part | denotes | striatum | http://purl.org/sig/ont/fma/fma77618 |
T575 | 3515-3521 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T576 | 3525-3531 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
T577 | 3542-3550 | Body_part | denotes | striatum | http://purl.org/sig/ont/fma/fma77618 |
T578 | 3703-3711 | Body_part | denotes | striatum | http://purl.org/sig/ont/fma/fma77618 |
T579 | 3796-3802 | Body_part | denotes | tissue | http://purl.org/sig/ont/fma/fma9637 |
T580 | 3806-3812 | Body_part | denotes | plasma | http://purl.org/sig/ont/fma/fma62970 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T105 | 22-27 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T106 | 904-909 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T107 | 1015-1020 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T108 | 1436-1439 | Body_part | denotes | CNS | http://purl.obolibrary.org/obo/UBERON_0001017 |
T109 | 1566-1571 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T110 | 1653-1658 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T111 | 1794-1799 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T112 | 2569-2580 | Body_part | denotes | vasculature | http://purl.obolibrary.org/obo/UBERON_0002049 |
T113 | 2590-2608 | Body_part | denotes | perivascular space | http://purl.obolibrary.org/obo/UBERON_0014930 |
T114 | 2616-2626 | Body_part | denotes | parenchyma | http://purl.obolibrary.org/obo/UBERON_0000353 |
T115 | 2634-2642 | Body_part | denotes | striatum | http://purl.obolibrary.org/obo/UBERON_0002435 |
T116 | 2721-2727 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T117 | 2925-2943 | Body_part | denotes | perivascular space | http://purl.obolibrary.org/obo/UBERON_0014930 |
T118 | 2944-2954 | Body_part | denotes | parenchyma | http://purl.obolibrary.org/obo/UBERON_0000353 |
T119 | 3023-3027 | Body_part | denotes | hand | http://purl.obolibrary.org/obo/UBERON_0002398 |
T120 | 3132-3154 | Body_part | denotes | post-capillary venules | http://purl.obolibrary.org/obo/UBERON_0035428 |
T121 | 3137-3146 | Body_part | denotes | capillary | http://purl.obolibrary.org/obo/UBERON_0001982 |
T122 | 3256-3268 | Body_part | denotes | blood vessel | http://purl.obolibrary.org/obo/UBERON_0001981 |
T123 | 3256-3261 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T124 | 3262-3268 | Body_part | denotes | vessel | http://purl.obolibrary.org/obo/UBERON_0000055 |
T125 | 3349-3361 | Body_part | denotes | white matter | http://purl.obolibrary.org/obo/UBERON_0002316 |
T126 | 3380-3388 | Body_part | denotes | striatum | http://purl.obolibrary.org/obo/UBERON_0002435 |
T127 | 3481-3486 | Body_part | denotes | Scale | http://purl.obolibrary.org/obo/UBERON_0002542 |
T128 | 3515-3521 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
T129 | 3542-3550 | Body_part | denotes | striatum | http://purl.obolibrary.org/obo/UBERON_0002435 |
T130 | 3703-3711 | Body_part | denotes | striatum | http://purl.obolibrary.org/obo/UBERON_0002435 |
T131 | 3796-3802 | Body_part | denotes | tissue | http://purl.obolibrary.org/obo/UBERON_0000479 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T624 | 6-7 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T625 | 16-21 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
T626 | 22-27 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T627 | 22-27 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T628 | 42-58 | http://purl.obolibrary.org/obo/CL_0000115 | denotes | endothelial cell |
T629 | 70-79 | http://purl.obolibrary.org/obo/CL_0000127 | denotes | astrocyte |
T630 | 242-246 | http://purl.obolibrary.org/obo/CLO_0053704 | denotes | IL-8 |
T631 | 626-631 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T632 | 788-789 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T633 | 857-864 | http://purl.obolibrary.org/obo/CLO_0007225 | denotes | labeled |
T634 | 904-909 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T635 | 904-909 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T636 | 1015-1020 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T637 | 1015-1020 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T638 | 1025-1026 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T639 | 1207-1208 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T640 | 1407-1408 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T641 | 1436-1439 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | CNS |
T642 | 1436-1439 | http://www.ebi.ac.uk/efo/EFO_0000908 | denotes | CNS |
T643 | 1436-1439 | http://purl.obolibrary.org/obo/UBERON_0001017 | denotes | CNS |
T644 | 1566-1571 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T645 | 1566-1571 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T646 | 1653-1658 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T647 | 1653-1658 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T648 | 1717-1718 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T649 | 1794-1799 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T650 | 1794-1799 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T651 | 1876-1881 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
T652 | 1882-1888 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brains |
T653 | 1882-1888 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brains |
T654 | 1962-1963 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T655 | 1976-1977 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T656 | 2308-2309 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
T657 | 2788-2792 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T658 | 3237-3238 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T659 | 3256-3268 | http://purl.obolibrary.org/obo/UBERON_0001981 | denotes | blood vessel |
T660 | 3256-3268 | http://www.ebi.ac.uk/efo/EFO_0000817 | denotes | blood vessel |
T661 | 3525-3531 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T662 | 3806-3812 | http://purl.obolibrary.org/obo/UBERON_0001969 | denotes | plasma |
T663 | 3931-3932 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T97693 | 176-184 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T99 | 242-244 | Chemical | denotes | IL | http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072 |
T101 | 320-328 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T34792 | 343-351 | Chemical | denotes | Morphine | http://purl.obolibrary.org/obo/CHEBI_17303 |
T104 | 462-470 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T7399 | 508-515 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T80740 | 541-549 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T4988 | 700-708 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T91450 | 771-779 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T19298 | 865-873 | Chemical | denotes | dextrans | http://purl.obolibrary.org/obo/CHEBI_52071 |
T94726 | 949-957 | Chemical | denotes | Morphine | http://purl.obolibrary.org/obo/CHEBI_17303 |
T77966 | 1083-1091 | Chemical | denotes | Morphine | http://purl.obolibrary.org/obo/CHEBI_17303 |
T99250 | 1159-1163 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T76004 | 1181-1188 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T118 | 1228-1236 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T75473 | 1321-1329 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T72889 | 1394-1398 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T123 | 1508-1512 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T54933 | 1523-1531 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T125 | 1605-1613 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T127 | 1770-1776 | Chemical | denotes | tracer | http://purl.obolibrary.org/obo/CHEBI_35204 |
T88715 | 1906-1914 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T13546 | 2005-2013 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T66413 | 2141-2149 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T134 | 2239-2247 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T136 | 2297-2305 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T138 | 2435-2443 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T81225 | 2460-2468 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T142 | 2489-2497 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T37279 | 2757-2770 | Chemical | denotes | Hoechst 33342 | http://purl.obolibrary.org/obo/CHEBI_51232 |
T79767 | 2793-2799 | Chemical | denotes | nuclei | http://purl.obolibrary.org/obo/CHEBI_33252 |
T42686 | 2854-2857 | Chemical | denotes | DIC | http://purl.obolibrary.org/obo/CHEBI_4305|http://purl.obolibrary.org/obo/CHEBI_53092 |
T5674 | 2983-2991 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T61069 | 3435-3440 | Chemical | denotes | group | http://purl.obolibrary.org/obo/CHEBI_24433 |
T21571 | 3588-3596 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T2284 | 3633-3645 | Chemical | denotes | dolutegravir | http://purl.obolibrary.org/obo/CHEBI_76010 |
T19714 | 3654-3662 | Chemical | denotes | abacavir | http://purl.obolibrary.org/obo/CHEBI_421707 |
T29469 | 3676-3686 | Chemical | denotes | lamivudine | http://purl.obolibrary.org/obo/CHEBI_63577 |
T20462 | 3766-3774 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T49655 | 3890-3898 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
T84615 | 3915-3923 | Chemical | denotes | morphine | http://purl.obolibrary.org/obo/CHEBI_17303|http://purl.obolibrary.org/obo/CHEBI_58097 |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
2041 | 1692-1695 | Gene | denotes | Tat | Gene:234724 |
2042 | 1803-1806 | Gene | denotes | Tat | Gene:234724 |
2043 | 1832-1835 | Gene | denotes | Tat | Gene:234724 |
2044 | 1930-1933 | Gene | denotes | Tat | Gene:234724 |
2045 | 2198-2201 | Gene | denotes | Tat | Gene:234724 |
2046 | 2208-2211 | Gene | denotes | Tat | Gene:234724 |
2047 | 2390-2393 | Gene | denotes | Tat | Gene:234724 |
2048 | 2410-2413 | Gene | denotes | Tat | Gene:234724 |
2049 | 2430-2433 | Gene | denotes | Tat | Gene:234724 |
2050 | 2455-2458 | Gene | denotes | Tat | Gene:234724 |
2051 | 3574-3577 | Gene | denotes | Tat | Gene:234724 |
2052 | 3845-3848 | Gene | denotes | Tat | Gene:234724 |
2053 | 3865-3868 | Gene | denotes | Tat | Gene:234724 |
2054 | 3885-3888 | Gene | denotes | Tat | Gene:234724 |
2055 | 3910-3913 | Gene | denotes | Tat | Gene:234724 |
2056 | 1597-1600 | Gene | denotes | Tat | Gene:6898 |
2057 | 1870-1873 | Gene | denotes | Tat | Gene:234724 |
2058 | 1591-1596 | Species | denotes | HIV-1 | Tax:11676 |
2059 | 1846-1850 | Species | denotes | mice | Tax:10090 |
2060 | 1876-1881 | Species | denotes | mouse | Tax:10090 |
2061 | 1944-1948 | Species | denotes | mice | Tax:10090 |
2062 | 2469-2473 | Species | denotes | mice | Tax:10090 |
2063 | 2517-2528 | Species | denotes | horseradish | Tax:3704 |
2064 | 3000-3004 | Species | denotes | mice | Tax:10090 |
2065 | 3426-3430 | Species | denotes | mice | Tax:10090 |
2066 | 3924-3928 | Species | denotes | mice | Tax:10090 |
2067 | 1605-1613 | Chemical | denotes | morphine | MESH:D009020 |
2068 | 1906-1914 | Chemical | denotes | morphine | MESH:D009020 |
2069 | 2005-2013 | Chemical | denotes | morphine | MESH:D009020 |
2070 | 2141-2149 | Chemical | denotes | morphine | MESH:D009020 |
2071 | 2239-2247 | Chemical | denotes | morphine | MESH:D009020 |
2072 | 2297-2305 | Chemical | denotes | morphine | MESH:D009020 |
2073 | 2435-2443 | Chemical | denotes | morphine | MESH:D009020 |
2074 | 2460-2468 | Chemical | denotes | morphine | MESH:D009020 |
2075 | 2489-2497 | Chemical | denotes | morphine | MESH:D009020 |
2076 | 2757-2770 | Chemical | denotes | Hoechst 33342 | MESH:C017807 |
2077 | 2983-2991 | Chemical | denotes | morphine | MESH:D009020 |
2078 | 3588-3596 | Chemical | denotes | morphine | MESH:D009020 |
2079 | 3633-3645 | Chemical | denotes | dolutegravir | MESH:C562325 |
2080 | 3654-3662 | Chemical | denotes | abacavir | MESH:C106538 |
2081 | 3676-3686 | Chemical | denotes | lamivudine | MESH:D019259 |
2082 | 3766-3774 | Chemical | denotes | morphine | MESH:D009020 |
2083 | 3890-3898 | Chemical | denotes | morphine | MESH:D009020 |
2084 | 3915-3923 | Chemical | denotes | morphine | MESH:D009020 |
2085 | 1621-1630 | Disease | denotes | leakiness | MESH:C535298 |
2121 | 195-198 | Gene | denotes | Tat | Gene:6898 |
2122 | 232-237 | Gene | denotes | TNF-α | Gene:7124 |
2123 | 242-246 | Gene | denotes | IL-8 | Gene:3576 |
2124 | 332-335 | Gene | denotes | Tat | Gene:6898 |
2125 | 356-359 | Gene | denotes | Tat | Gene:6898 |
2126 | 398-403 | Gene | denotes | JAM-2 | Gene:58494 |
2127 | 431-435 | Gene | denotes | ZO-1 | Gene:7082 |
2128 | 477-480 | Gene | denotes | Tat | Gene:6898 |
2129 | 499-507 | Gene | denotes | occludin | Gene:100506658 |
2130 | 564-567 | Gene | denotes | Tat | Gene:6898 |
2131 | 692-695 | Gene | denotes | Tat | Gene:6898 |
2132 | 804-807 | Gene | denotes | Tat | Gene:6898 |
2133 | 1190-1194 | Gene | denotes | P-gp | Gene:5243 |
2134 | 1422-1426 | Gene | denotes | P-gp | Gene:5243 |
2135 | 611-614 | Gene | denotes | Tat | Gene:234724 |
2136 | 16-21 | Species | denotes | human | Tax:9606 |
2137 | 189-194 | Species | denotes | HIV-1 | Tax:11676 |
2138 | 626-631 | Species | denotes | mouse | Tax:10090 |
2139 | 686-691 | Species | denotes | HIV-1 | Tax:11676 |
2140 | 615-625 | Species | denotes | transgenic | Tax:10090 |
2141 | 176-184 | Chemical | denotes | morphine | MESH:D009020 |
2142 | 320-328 | Chemical | denotes | morphine | MESH:D009020 |
2143 | 343-351 | Chemical | denotes | Morphine | MESH:D009020 |
2144 | 462-470 | Chemical | denotes | morphine | MESH:D009020 |
2145 | 541-549 | Chemical | denotes | morphine | MESH:D009020 |
2146 | 700-708 | Chemical | denotes | morphine | MESH:D009020 |
2147 | 771-779 | Chemical | denotes | morphine | MESH:D009020 |
2148 | 865-873 | Chemical | denotes | dextrans | MESH:D003911 |
2149 | 949-957 | Chemical | denotes | Morphine | MESH:D009020 |
2150 | 1083-1091 | Chemical | denotes | Morphine | MESH:D009020 |
2151 | 1228-1236 | Chemical | denotes | morphine | MESH:D009020 |
2152 | 1321-1329 | Chemical | denotes | morphine | MESH:D009020 |
2153 | 1481-1489 | Chemical | denotes | morphine | MESH:D009020 |
2154 | 279-288 | Disease | denotes | tightness | MESH:C536920 |
2155 | 1003-1007 | Disease | denotes | ARVs |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T101 | 1164-1170 | http://purl.obolibrary.org/obo/GO_0140352 | denotes | efflux |
T102 | 1164-1170 | http://purl.obolibrary.org/obo/GO_0140115 | denotes | efflux |
T103 | 1171-1180 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transport |
T104 | 1508-1522 | http://purl.obolibrary.org/obo/GO_0015893 | denotes | drug transport |
T105 | 1513-1522 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transport |
T106 | 2517-2545 | http://purl.obolibrary.org/obo/GO_0004601 | denotes | horseradish peroxidase (HRP) |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T779 | 0-342 | Sentence | denotes | Using a primary human brain microvascular endothelial cell (BMEC) and astrocyte co-culture model, Mahajan et al. (2008) were among the first to demonstrate that co-exposure to morphine and HIV-1 Tat resulted in greater increases in TNF-α and IL-8 levels and decreases in barrier tightness (measured by TEER) than either morphine or Tat alone. |
T780 | 343-583 | Sentence | denotes | Morphine and Tat co-exposure also additively increased JAM-2, while zonula occludens-1 (ZO-1) levels were decreased by morphine or by Tat individually, and occludin protein levels were decreased by morphine alone but not Tat (Mahajan et al. |
T781 | 584-590 | Sentence | denotes | 2008). |
T782 | 591-752 | Sentence | denotes | Using the inducible Tat transgenic mouse model, Leibrand et al. (2019), also demonstrated that HIV-1 Tat and morphine act independently to disrupt BBB integrity. |
T783 | 753-926 | Sentence | denotes | In these studies, morphine, and to a lesser extent Tat, exposure increased the leakage of fluorescently labeled dextrans from the circulation into the brain (Leibrand et al. |
T784 | 927-948 | Sentence | denotes | 2017, 2019) (Fig. 3). |
T785 | 949-1066 | Sentence | denotes | Morphine exposure decreased the penetration of select ARVs in the brain, in a region-specific manner (Leibrand et al. |
T786 | 1067-1082 | Sentence | denotes | 2019) (Fig. 3). |
T787 | 1083-1286 | Sentence | denotes | Morphine exposure also resulted in increased expression and function of the drug efflux transport protein, P-gp, suggesting a mechanism by which morphine decreased the ARV concentrations (Leibrand et al. |
T788 | 1287-1293 | Sentence | denotes | 2019). |
T789 | 1294-1440 | Sentence | denotes | This finding suggests that morphine exposure could impact the efficient delivery of any therapeutic drug that is a substrate of P-gp into the CNS. |
T790 | 1441-1572 | Sentence | denotes | Future research should also investigate morphine’s impact on other drug transport proteins important for ARV delivery to the brain. |
T791 | 1573-1674 | Sentence | denotes | Fig. 3 Effects of HIV-1 Tat and morphine on BBB leakiness and on antiretroviral brain concentrations. |
T792 | 1675-1965 | Sentence | denotes | After 14 days of Tat induction, there was a significant increase in the 10 kDa (Cascade Blue®) tracer leakage into the brain in Tat + placebo as compared to Tat − placebo mice (*p < 0.05) and in Tat − mouse brains upon exposure to morphine as compared to Tat − placebo mice (*p < 0.05) (a). |
T793 | 1966-2314 | Sentence | denotes | There was a significant main effect of morphine, resulting in reduced integrity of the BBB and increased leakage of the higher molecular weight (40 kDa and 70 kDa) tracers in morphine-exposed groups as compared to the those groups (Tat + and Tat − together) not exposed to morphine (placebo) (#p < 0.05; significant main effect of morphine) (b, c). |
T794 | 2315-2474 | Sentence | denotes | Data represent the fold change in mean fluorescence intensity ± SEM; n = 8 Tat−/placebo, n = 6 Tat+/placebo, n = 9 Tat−/morphine, and n = 7 Tat+/morphine mice. |
T795 | 2475-2650 | Sentence | denotes | Additionally, morphine exposure increased horseradish peroxidase (HRP) extravasation from the vasculature into the perivascular space and/or parenchyma in the striatum (d, e). |
T796 | 2651-2888 | Sentence | denotes | HRP antigenicity was detected by indirect immunofluorescence (red) in tissue sections counterstained with Hoechst 33342 (blue) to reveal cell nuclei and visualized by differential interference contrast (DIC)-enhanced confocal microscopy. |
T797 | 2889-3050 | Sentence | denotes | HRP extravasation into the striatal perivascular space/parenchyma was especially prevalent in morphine-exposed mice (arrowheads; left-hand panels in e versus d). |
T798 | 3051-3321 | Sentence | denotes | The dotted lines (············) indicate the approximate edge of the capillaries/post-capillary venules; while intermittent dotted lines (· · · · · · ·) indicate the approximate edge of a partly sectioned blood vessel that appears partially outside the plane of section. |
T799 | 3322-3389 | Sentence | denotes | The asterisks (*) indicate white matter tracts within the striatum. |
T800 | 3390-3441 | Sentence | denotes | Representative samples from ≥ n = 4 mice per group. |
T801 | 3442-3480 | Sentence | denotes | All images are the same magnification. |
T802 | 3481-3499 | Sentence | denotes | Scale bar = 10 μm. |
T803 | 3500-3557 | Sentence | denotes | Antiretroviral tissue-to-plasma ratios in striatum (f–g). |
T804 | 3558-3776 | Sentence | denotes | Irrespective of Tat exposure, morphine significantly reduced the levels of dolutegravir (f) and abacavir (g), but not lamivudine (h), within the striatum, as compared to placebo. (* p < 0.05; main effect for morphine). |
T805 | 3777-4002 | Sentence | denotes | Data represent the tissue-to-plasma ratios ± SEM sampled from n = 9 Tat−/placebo, n = 9 Tat+/placebo, n = 6 Tat−/morphine, and n = 8 Tat+/morphine mice. (a–h) Modified and reprinted with permission from Leibrand et al. (2019) |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T46 | 2590-2608 | Phenotype | denotes | perivascular space | http://purl.obolibrary.org/obo/HP_0012520 |
T47 | 2925-2943 | Phenotype | denotes | perivascular space | http://purl.obolibrary.org/obo/HP_0012520 |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
32876803-28057474-62958122 | 927-931 | 28057474 | denotes | 2017 |