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PMC:7456203 / 3939-5384 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T28 54-59 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T29 366-378 Body_part denotes white matter http://purl.org/sig/ont/fma/fma83929
T30 419-423 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T31 890-894 Body_part denotes vein http://purl.org/sig/ont/fma/fma50723
T32 1189-1194 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801
T33 1353-1358 Body_part denotes brain http://purl.org/sig/ont/fma/fma50801

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T26 54-59 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T27 366-378 Body_part denotes white matter http://purl.obolibrary.org/obo/UBERON_0002316
T28 419-423 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T29 890-894 Body_part denotes vein http://purl.obolibrary.org/obo/UBERON_0001638
T30 1189-1194 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955
T31 1353-1358 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T13 99-107 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 108-117 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T15 494-502 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 654-680 Disease denotes thrombotic microangiopathy http://purl.obolibrary.org/obo/MONDO_0019737
T17 950-967 Disease denotes venous thrombosis http://purl.obolibrary.org/obo/MONDO_0008559
T18 957-967 Disease denotes thrombosis http://purl.obolibrary.org/obo/MONDO_0000831
T19 983-991 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T55 24-25 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T56 54-59 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T57 54-59 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T58 419-423 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T59 419-423 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T60 471-472 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T61 757-758 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 890-894 http://purl.obolibrary.org/obo/UBERON_0001638 denotes vein
T63 890-894 http://www.ebi.ac.uk/efo/EFO_0000816 denotes vein
T64 1114-1115 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T65 1189-1194 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T66 1189-1194 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T67 1353-1358 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T68 1353-1358 http://www.ebi.ac.uk/efo/EFO_0000302 denotes brain
T69 1417-1418 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T4 1139-1152 Chemical denotes anticoagulant http://purl.obolibrary.org/obo/CHEBI_50249

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T22 0-118 Sentence denotes In conclusion, we noted a high percentage of abnormal brain CT studies in ICU patients with severe COVID-19 infection.
T23 119-275 Sentence denotes Such abnormalities were hemorrhagic in most of the cases, highly consistent across patients, and related to worse P/F ratio and higher inflammatory indexes.
T24 276-436 Sentence denotes The superficial distribution of hemorrhagic lesions is unusual and clearly different from white matter microhemorrhages described after severe lung failure [3].
T25 437-808 Sentence denotes We speculate on the occurrence of a diverse mechanism in COVID-19 patients, possibly related to endothelial damage [4], resulting in impaired microcirculatory function and vascular fragility with microhemorrhages, or thrombotic microangiopathy [5], that may be supported by similar imaging findings recently reported in a small cohort of four critically ill patients [6].
T26 809-998 Sentence denotes The imaging picture could also be related to the occurrence of isolated cortical vein microthrombosis, considering the increased tendency to venous thrombosis in more severe COVID-19 cases.
T27 999-1319 Sentence denotes Due to the therapeutic-intensity anticoagulation common to all cases, it is not possible to make any conclusion on a possible impact of the anticoagulant therapy itself on the prevalence of brain CT hemorrhages in the studied cohort, particularly in the absence of sufficient evidence-based data on the topic at present.
T28 1320-1445 Sentence denotes The association between abnormal brain CT and patients’ outcome deserves further confirmation in a larger cohort of patients.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T6 950-967 Phenotype denotes venous thrombosis http://purl.obolibrary.org/obo/HP_0004936

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T30 99-107 SP_7 denotes COVID-19
T31 196-211 UBERON:0001851 denotes cross patients,
T32 230-242 UBERON:0003893 denotes se P/F ratio
T33 343-349 UBERON:0001851 denotes clearl
T34 412-418 PR:000005897 denotes severe
T35 491-493 UBERON:0000955 denotes in
T38 601-603 CHEBI:16526;CHEBI:16526 denotes io
T41 628-632 CL:0000738 denotes with
T45 782-793 UBERON:0000970 denotes itically il
T46 797-798 UBERON:0001443 denotes t
T49 855-857 UBERON:0001443 denotes he
T51 952-953 UBERON:0000955 denotes n
T52 968-970 GO:0050817 denotes in
T53 992-994 GO:0050817 denotes ca
T54 1032-1047 GO:0050817 denotes anticoagulation
T72 1189-1194 UBERON:0000955 denotes brain
T73 1353-1358 UBERON:0000955 denotes brain
T68476 99-107 SP_7 denotes COVID-19
T58 54-59 UBERON:0000955 denotes brain
T59 99-107 SP_7 denotes COVID-19
T60 366-378 UBERON:0002316 denotes white matter
T61 419-423 UBERON:0002048 denotes lung
T62 494-502 SP_7 denotes COVID-19
T63 533-544 UBERON:0001986 denotes endothelial
T64 654-664 GO:0007596 denotes thrombotic
T65 881-889 UBERON:0001851 denotes cortical
T66 890-894 UBERON:0001638 denotes vein
T67 895-910 GO:0007596 denotes microthrombosis
T68 950-956 UBERON:0001638 denotes venous
T69 957-967 GO:0007596 denotes thrombosis
T70 983-991 SP_7 denotes COVID-19
T71 1032-1047 GO:0050817 denotes anticoagulation
T93069 1189-1194 UBERON:0000955 denotes brain
T54194 1353-1358 UBERON:0000955 denotes brain

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
90 78-86 Species denotes patients Tax:9606
91 202-210 Species denotes patients Tax:9606
92 503-511 Species denotes patients Tax:9606
93 795-803 Species denotes patients Tax:9606
94 1366-1374 Species denotes patients Tax:9606
95 1436-1444 Species denotes patients Tax:9606
96 99-107 Disease denotes COVID-19 MESH:C000657245
97 108-117 Disease denotes infection MESH:D007239
98 143-154 Disease denotes hemorrhagic MESH:D006470
99 308-327 Disease denotes hemorrhagic lesions MESH:D006470
100 366-395 Disease denotes white matter microhemorrhages MESH:D056784
101 419-431 Disease denotes lung failure MESH:D012131
102 494-502 Disease denotes COVID-19 MESH:C000657245
103 633-649 Disease denotes microhemorrhages
104 654-680 Disease denotes thrombotic microangiopathy MESH:D057049
105 780-794 Disease denotes critically ill MESH:D016638
106 890-910 Disease denotes vein microthrombosis MESH:D020246
107 950-967 Disease denotes venous thrombosis MESH:D020246
108 983-991 Disease denotes COVID-19 MESH:C000657245
109 1198-1209 Disease denotes hemorrhages MESH:D006470