PMC:7456203 / 3939-5384
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T28 | 54-59 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T29 | 366-378 | Body_part | denotes | white matter | http://purl.org/sig/ont/fma/fma83929 |
T30 | 419-423 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T31 | 890-894 | Body_part | denotes | vein | http://purl.org/sig/ont/fma/fma50723 |
T32 | 1189-1194 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
T33 | 1353-1358 | Body_part | denotes | brain | http://purl.org/sig/ont/fma/fma50801 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T26 | 54-59 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T27 | 366-378 | Body_part | denotes | white matter | http://purl.obolibrary.org/obo/UBERON_0002316 |
T28 | 419-423 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T29 | 890-894 | Body_part | denotes | vein | http://purl.obolibrary.org/obo/UBERON_0001638 |
T30 | 1189-1194 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
T31 | 1353-1358 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T13 | 99-107 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T14 | 108-117 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T15 | 494-502 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
T16 | 654-680 | Disease | denotes | thrombotic microangiopathy | http://purl.obolibrary.org/obo/MONDO_0019737 |
T17 | 950-967 | Disease | denotes | venous thrombosis | http://purl.obolibrary.org/obo/MONDO_0008559 |
T18 | 957-967 | Disease | denotes | thrombosis | http://purl.obolibrary.org/obo/MONDO_0000831 |
T19 | 983-991 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T55 | 24-25 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T56 | 54-59 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T57 | 54-59 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T58 | 419-423 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T59 | 419-423 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T60 | 471-472 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T61 | 757-758 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T62 | 890-894 | http://purl.obolibrary.org/obo/UBERON_0001638 | denotes | vein |
T63 | 890-894 | http://www.ebi.ac.uk/efo/EFO_0000816 | denotes | vein |
T64 | 1114-1115 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T65 | 1189-1194 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T66 | 1189-1194 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T67 | 1353-1358 | http://purl.obolibrary.org/obo/UBERON_0000955 | denotes | brain |
T68 | 1353-1358 | http://www.ebi.ac.uk/efo/EFO_0000302 | denotes | brain |
T69 | 1417-1418 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T4 | 1139-1152 | Chemical | denotes | anticoagulant | http://purl.obolibrary.org/obo/CHEBI_50249 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T22 | 0-118 | Sentence | denotes | In conclusion, we noted a high percentage of abnormal brain CT studies in ICU patients with severe COVID-19 infection. |
T23 | 119-275 | Sentence | denotes | Such abnormalities were hemorrhagic in most of the cases, highly consistent across patients, and related to worse P/F ratio and higher inflammatory indexes. |
T24 | 276-436 | Sentence | denotes | The superficial distribution of hemorrhagic lesions is unusual and clearly different from white matter microhemorrhages described after severe lung failure [3]. |
T25 | 437-808 | Sentence | denotes | We speculate on the occurrence of a diverse mechanism in COVID-19 patients, possibly related to endothelial damage [4], resulting in impaired microcirculatory function and vascular fragility with microhemorrhages, or thrombotic microangiopathy [5], that may be supported by similar imaging findings recently reported in a small cohort of four critically ill patients [6]. |
T26 | 809-998 | Sentence | denotes | The imaging picture could also be related to the occurrence of isolated cortical vein microthrombosis, considering the increased tendency to venous thrombosis in more severe COVID-19 cases. |
T27 | 999-1319 | Sentence | denotes | Due to the therapeutic-intensity anticoagulation common to all cases, it is not possible to make any conclusion on a possible impact of the anticoagulant therapy itself on the prevalence of brain CT hemorrhages in the studied cohort, particularly in the absence of sufficient evidence-based data on the topic at present. |
T28 | 1320-1445 | Sentence | denotes | The association between abnormal brain CT and patients’ outcome deserves further confirmation in a larger cohort of patients. |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T6 | 950-967 | Phenotype | denotes | venous thrombosis | http://purl.obolibrary.org/obo/HP_0004936 |
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T30 | 99-107 | SP_7 | denotes | COVID-19 |
T31 | 196-211 | UBERON:0001851 | denotes | cross patients, |
T32 | 230-242 | UBERON:0003893 | denotes | se P/F ratio |
T33 | 343-349 | UBERON:0001851 | denotes | clearl |
T34 | 412-418 | PR:000005897 | denotes | severe |
T35 | 491-493 | UBERON:0000955 | denotes | in |
T38 | 601-603 | CHEBI:16526;CHEBI:16526 | denotes | io |
T41 | 628-632 | CL:0000738 | denotes | with |
T45 | 782-793 | UBERON:0000970 | denotes | itically il |
T46 | 797-798 | UBERON:0001443 | denotes | t |
T49 | 855-857 | UBERON:0001443 | denotes | he |
T51 | 952-953 | UBERON:0000955 | denotes | n |
T52 | 968-970 | GO:0050817 | denotes | in |
T53 | 992-994 | GO:0050817 | denotes | ca |
T54 | 1032-1047 | GO:0050817 | denotes | anticoagulation |
T72 | 1189-1194 | UBERON:0000955 | denotes | brain |
T73 | 1353-1358 | UBERON:0000955 | denotes | brain |
T68476 | 99-107 | SP_7 | denotes | COVID-19 |
T58 | 54-59 | UBERON:0000955 | denotes | brain |
T59 | 99-107 | SP_7 | denotes | COVID-19 |
T60 | 366-378 | UBERON:0002316 | denotes | white matter |
T61 | 419-423 | UBERON:0002048 | denotes | lung |
T62 | 494-502 | SP_7 | denotes | COVID-19 |
T63 | 533-544 | UBERON:0001986 | denotes | endothelial |
T64 | 654-664 | GO:0007596 | denotes | thrombotic |
T65 | 881-889 | UBERON:0001851 | denotes | cortical |
T66 | 890-894 | UBERON:0001638 | denotes | vein |
T67 | 895-910 | GO:0007596 | denotes | microthrombosis |
T68 | 950-956 | UBERON:0001638 | denotes | venous |
T69 | 957-967 | GO:0007596 | denotes | thrombosis |
T70 | 983-991 | SP_7 | denotes | COVID-19 |
T71 | 1032-1047 | GO:0050817 | denotes | anticoagulation |
T93069 | 1189-1194 | UBERON:0000955 | denotes | brain |
T54194 | 1353-1358 | UBERON:0000955 | denotes | brain |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
90 | 78-86 | Species | denotes | patients | Tax:9606 |
91 | 202-210 | Species | denotes | patients | Tax:9606 |
92 | 503-511 | Species | denotes | patients | Tax:9606 |
93 | 795-803 | Species | denotes | patients | Tax:9606 |
94 | 1366-1374 | Species | denotes | patients | Tax:9606 |
95 | 1436-1444 | Species | denotes | patients | Tax:9606 |
96 | 99-107 | Disease | denotes | COVID-19 | MESH:C000657245 |
97 | 108-117 | Disease | denotes | infection | MESH:D007239 |
98 | 143-154 | Disease | denotes | hemorrhagic | MESH:D006470 |
99 | 308-327 | Disease | denotes | hemorrhagic lesions | MESH:D006470 |
100 | 366-395 | Disease | denotes | white matter microhemorrhages | MESH:D056784 |
101 | 419-431 | Disease | denotes | lung failure | MESH:D012131 |
102 | 494-502 | Disease | denotes | COVID-19 | MESH:C000657245 |
103 | 633-649 | Disease | denotes | microhemorrhages | |
104 | 654-680 | Disease | denotes | thrombotic microangiopathy | MESH:D057049 |
105 | 780-794 | Disease | denotes | critically ill | MESH:D016638 |
106 | 890-910 | Disease | denotes | vein microthrombosis | MESH:D020246 |
107 | 950-967 | Disease | denotes | venous thrombosis | MESH:D020246 |
108 | 983-991 | Disease | denotes | COVID-19 | MESH:C000657245 |
109 | 1198-1209 | Disease | denotes | hemorrhages | MESH:D006470 |