PMC:7455778 / 3483-4112 JSONTXT

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T1","span":{"begin":513,"end":527},"obj":"Body_part"},{"id":"T2","span":{"begin":563,"end":570},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"fma_id","subj":"T1","obj":"http://purl.org/sig/ont/fma/fma83066"},{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T1","span":{"begin":513,"end":527},"obj":"Body_part"},{"id":"T2","span":{"begin":522,"end":527},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0013755"},{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T40","span":{"begin":48,"end":56},"obj":"Disease"},{"id":"T41","span":{"begin":59,"end":68},"obj":"Disease"},{"id":"T42","span":{"begin":238,"end":247},"obj":"Disease"},{"id":"T43","span":{"begin":263,"end":272},"obj":"Disease"},{"id":"T44","span":{"begin":278,"end":297},"obj":"Disease"},{"id":"T45","span":{"begin":403,"end":412},"obj":"Disease"},{"id":"T46","span":{"begin":414,"end":433},"obj":"Disease"}],"attributes":[{"id":"A40","pred":"mondo_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A41","pred":"mondo_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A42","pred":"mondo_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A43","pred":"mondo_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A44","pred":"mondo_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/MONDO_0021113"},{"id":"A45","pred":"mondo_id","subj":"T45","obj":"http://purl.obolibrary.org/obo/MONDO_0005249"},{"id":"A46","pred":"mondo_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/MONDO_0021113"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T15","span":{"begin":513,"end":521},"obj":"http://purl.obolibrary.org/obo/UBERON_0001637"},{"id":"T16","span":{"begin":513,"end":521},"obj":"http://www.ebi.ac.uk/efo/EFO_0000814"},{"id":"T17","span":{"begin":522,"end":527},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T18","span":{"begin":522,"end":527},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T4","span":{"begin":563,"end":570},"obj":"Chemical"},{"id":"T5","span":{"begin":587,"end":594},"obj":"Chemical"}],"attributes":[{"id":"A4","pred":"chebi_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_24996"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T17","span":{"begin":238,"end":247},"obj":"Phenotype"},{"id":"T18","span":{"begin":263,"end":272},"obj":"Phenotype"},{"id":"T19","span":{"begin":278,"end":297},"obj":"Phenotype"},{"id":"T20","span":{"begin":403,"end":412},"obj":"Phenotype"},{"id":"T21","span":{"begin":414,"end":433},"obj":"Phenotype"}],"attributes":[{"id":"A17","pred":"hp_id","subj":"T17","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A18","pred":"hp_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A19","pred":"hp_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/HP_0002878"},{"id":"A20","pred":"hp_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/HP_0002090"},{"id":"A21","pred":"hp_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/HP_0002878"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-sentences","denotations":[{"id":"T35","span":{"begin":0,"end":83},"obj":"Sentence"},{"id":"T36","span":{"begin":84,"end":629},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T27","span":{"begin":48,"end":58},"obj":"SP_7"},{"id":"T28","span":{"begin":278,"end":289},"obj":"UBERON:0001004"},{"id":"T29","span":{"begin":320,"end":331},"obj":"UBERON:0001004"},{"id":"T30","span":{"begin":414,"end":425},"obj":"UBERON:0001004"},{"id":"T31","span":{"begin":456,"end":467},"obj":"UBERON:0001004"},{"id":"T32","span":{"begin":513,"end":527},"obj":"UBERON:0013755"},{"id":"T33","span":{"begin":552,"end":570},"obj":"PR:000005897"},{"id":"T34","span":{"begin":587,"end":594},"obj":"CHEBI:24996;CHEBI:24996"},{"id":"T89132","span":{"begin":48,"end":58},"obj":"SP_7"},{"id":"T47857","span":{"begin":278,"end":289},"obj":"UBERON:0001004"},{"id":"T2886","span":{"begin":320,"end":331},"obj":"UBERON:0001004"},{"id":"T15344","span":{"begin":414,"end":425},"obj":"UBERON:0001004"},{"id":"T45454","span":{"begin":456,"end":467},"obj":"UBERON:0001004"},{"id":"T78705","span":{"begin":513,"end":527},"obj":"UBERON:0013755"},{"id":"T87331","span":{"begin":552,"end":570},"obj":"PR:000005897"},{"id":"T17508","span":{"begin":587,"end":594},"obj":"CHEBI:24996;CHEBI:24996"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}

{"project":"LitCovid-PubTator","denotations":[{"id":"112","span":{"begin":552,"end":570},"obj":"Gene"},{"id":"113","span":{"begin":13,"end":21},"obj":"Species"},{"id":"114","span":{"begin":153,"end":161},"obj":"Species"},{"id":"115","span":{"begin":372,"end":379},"obj":"Species"},{"id":"116","span":{"begin":48,"end":68},"obj":"Disease"},{"id":"117","span":{"begin":238,"end":247},"obj":"Disease"},{"id":"118","span":{"begin":252,"end":272},"obj":"Disease"},{"id":"119","span":{"begin":278,"end":297},"obj":"Disease"},{"id":"120","span":{"begin":403,"end":412},"obj":"Disease"},{"id":"121","span":{"begin":414,"end":433},"obj":"Disease"}],"attributes":[{"id":"A112","pred":"tao:has_database_id","subj":"112","obj":"Gene:1401"},{"id":"A113","pred":"tao:has_database_id","subj":"113","obj":"Tax:9606"},{"id":"A114","pred":"tao:has_database_id","subj":"114","obj":"Tax:9606"},{"id":"A115","pred":"tao:has_database_id","subj":"115","obj":"Tax:9606"},{"id":"A116","pred":"tao:has_database_id","subj":"116","obj":"MESH:C000657245"},{"id":"A117","pred":"tao:has_database_id","subj":"117","obj":"MESH:D011014"},{"id":"A118","pred":"tao:has_database_id","subj":"118","obj":"MESH:D011014"},{"id":"A119","pred":"tao:has_database_id","subj":"119","obj":"MESH:D012131"},{"id":"A120","pred":"tao:has_database_id","subj":"120","obj":"MESH:D011014"},{"id":"A121","pred":"tao:has_database_id","subj":"121","obj":"MESH:D012131"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Hospitalized patients with laboratory-confirmed SARS-CoV-2 infection were included. Based on the hospital's protocol, the general admission criteria for patients were as follows: (1) \u003c 50 years of age without comorbidities with bilateral pneumonia, or unilateral pneumonia with respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20); or (2) \u003e 50 years of age or patient with comorbidity: with pneumonia, respiratory failure (saturation \u003c 96% and respiratory rate \u003e 20), or laboratory/clinical severity (arterial blood gas, hemogram, D-dimer, C-reactive protein, procalcitonin, lactate dehydrogenase—LDH, transaminases)."}