PMC:7455777 / 2209-3421
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T14 | 255-270 | Body_part | denotes | Cerebral cortex | http://purl.org/sig/ont/fma/fma61830 |
| T15 | 357-364 | Body_part | denotes | neurons | http://purl.org/sig/ont/fma/fma54527 |
| T16 | 809-821 | Body_part | denotes | white matter | http://purl.org/sig/ont/fma/fma83929 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T12 | 255-270 | Body_part | denotes | Cerebral cortex | http://purl.obolibrary.org/obo/UBERON_0000956 |
| T13 | 264-270 | Body_part | denotes | cortex | http://purl.obolibrary.org/obo/UBERON_0001851 |
| T14 | 809-821 | Body_part | denotes | white matter | http://purl.obolibrary.org/obo/UBERON_0002316 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T26 | 81-89 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T27 | 180-192 | Disease | denotes | Encephalitis | http://purl.obolibrary.org/obo/MONDO_0019956 |
| T28 | 193-203 | Disease | denotes | meningitis | http://purl.obolibrary.org/obo/MONDO_0004796|http://purl.obolibrary.org/obo/MONDO_0021108 |
| T30 | 271-283 | Disease | denotes | encephalitis | http://purl.obolibrary.org/obo/MONDO_0019956 |
| T31 | 384-398 | Disease | denotes | Encephalopathy | http://purl.obolibrary.org/obo/MONDO_0005560 |
| T32 | 510-528 | Disease | denotes | multiorgan failure | http://purl.obolibrary.org/obo/MONDO_0043726 |
| T33 | 596-632 | Disease | denotes | Acute disseminated encephalomyelitis | http://purl.obolibrary.org/obo/MONDO_0019383 |
| T34 | 615-632 | Disease | denotes | encephalomyelitis | http://purl.obolibrary.org/obo/MONDO_0005156 |
| T35 | 692-711 | Disease | denotes | respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
| T36 | 854-877 | Disease | denotes | cerebrovascular disease | http://purl.obolibrary.org/obo/MONDO_0011057 |
| T37 | 1018-1032 | Disease | denotes | encephalopathy | http://purl.obolibrary.org/obo/MONDO_0005560 |
| T38 | 1033-1059 | Disease | denotes | Thrombotic microangiopathy | http://purl.obolibrary.org/obo/MONDO_0019737 |
| T39 | 1076-1082 | Disease | denotes | injury | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T40 | 1143-1161 | Disease | denotes | multiorgan failure | http://purl.obolibrary.org/obo/MONDO_0043726 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T41 | 255-270 | http://purl.obolibrary.org/obo/UBERON_0000956 | denotes | Cerebral cortex |
| T42 | 411-413 | http://purl.obolibrary.org/obo/CLO_0050510 | denotes | 18 |
| T43 | 997-1006 | http://purl.obolibrary.org/obo/UBERON_0001353 | denotes | posterior |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T10 | 180-192 | Phenotype | denotes | Encephalitis | http://purl.obolibrary.org/obo/HP_0002383 |
| T11 | 193-203 | Phenotype | denotes | meningitis | http://purl.obolibrary.org/obo/HP_0001287 |
| T12 | 271-283 | Phenotype | denotes | encephalitis | http://purl.obolibrary.org/obo/HP_0002383 |
| T13 | 384-398 | Phenotype | denotes | Encephalopathy | http://purl.obolibrary.org/obo/HP_0001298 |
| T14 | 438-445 | Phenotype | denotes | myalgia | http://purl.obolibrary.org/obo/HP_0003326 |
| T15 | 447-455 | Phenotype | denotes | headache | http://purl.obolibrary.org/obo/HP_0002315 |
| T16 | 461-476 | Phenotype | denotes | decreased taste | http://purl.obolibrary.org/obo/HP_0000224 |
| T17 | 633-640 | Phenotype | denotes | Fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T18 | 645-663 | Phenotype | denotes | exertional dyspnea | http://purl.obolibrary.org/obo/HP_0002875 |
| T19 | 679-684 | Phenotype | denotes | shock | http://purl.obolibrary.org/obo/HP_0031273 |
| T20 | 692-711 | Phenotype | denotes | respiratory failure | http://purl.obolibrary.org/obo/HP_0002878 |
| T21 | 750-763 | Phenotype | denotes | demyelinating | http://purl.obolibrary.org/obo/HP_0011096 |
| T22 | 974-993 | Phenotype | denotes | leukoencephalopathy | http://purl.obolibrary.org/obo/HP_0002352 |
| T23 | 1018-1032 | Phenotype | denotes | encephalopathy | http://purl.obolibrary.org/obo/HP_0001298 |
| T24 | 1134-1138 | Phenotype | denotes | coma | http://purl.obolibrary.org/obo/HP_0001259 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 471-476 | http://purl.obolibrary.org/obo/GO_0050909 | denotes | taste |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T15 | 0-98 | Sentence | denotes | Table 1 Neurological manifestations and associated neuropathological findings in COVID-19 patients |
| T16 | 99-179 | Sentence | denotes | Manifestations Presentations Neuropathological findings Type of study References |
| T17 | 180-383 | Sentence | denotes | Encephalitis/meningitis Three out of six patients presented with somnolent Cerebral cortex encephalitis with perivascular and parenchymal inflammatory infiltrates, and shrunken neurons Correspondence [5] |
| T18 | 384-595 | Sentence | denotes | Encephalopathy Four out of 18 patients presented with myalgia, headache, and decreased taste, progressed to consciousness and multiorgan failure Hypoxic changes with no specific pathology Retrospective study [6] |
| T19 | 596-847 | Sentence | denotes | Acute disseminated encephalomyelitis Fatigue and exertional dyspnea, progressed to shock state, respiratory failure Features resembling both vascular and demyelinating aetiologies among with range of sub-cortical white matter pathology Case report [7] |
| T20 | 848-1106 | Sentence | denotes | Acute cerebrovascular disease 17 patients presented with cerebral ischaemia, five with intracerebral haemorrhage and one with leukoencephalopathy of posterior reversible encephalopathy Thrombotic microangiopathy and endothelial injury Retrospective study [8] |
| T21 | 1107-1212 | Sentence | denotes | Two patient presented with coma and multiorgan failure Microthrombi and acute infarcts Correspondence [9] |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T63 | 81-89 | SP_7 | denotes | COVID-19 |
| T49 | 81-89 | SP_7 | denotes | COVID-19 |
| T50 | 264-270 | UBERON:0001851 | denotes | cortex |
| T51 | 289-301 | UBERON:0014930 | denotes | perivascular |
| T52 | 306-317 | UBERON:0008987 | denotes | parenchymal |
| T53 | 357-379 | CL:0000540 | denotes | neurons Correspondence |
| T54 | 471-476 | GO:0050909 | denotes | taste |
| T55 | 510-520 | UBERON:0000062 | denotes | multiorgan |
| T56 | 692-703 | UBERON:0001004 | denotes | respiratory |
| T57 | 800-808 | UBERON:0001851 | denotes | cortical |
| T58 | 809-821 | UBERON:0002316 | denotes | white matter |
| T59 | 854-869 | UBERON:0002037 | denotes | cerebrovascular |
| T60 | 905-913 | UBERON:0001893 | denotes | cerebral |
| T61 | 1064-1075 | UBERON:0001986 | denotes | endothelial |
| T62 | 1143-1153 | UBERON:0000062 | denotes | multiorgan |
| T78205 | 535-540 | NCBITaxon:10239 | denotes | c cha |
| T31513 | 542-546 | GO:0006955 | denotes | es w |
| T35827 | 547-552 | UBERON:0002405;GO:0006955 | denotes | th no |
| T24974 | 553-561 | GO:0006955 | denotes | specific |
| T55916 | 605-614 | UBERON:0002048 | denotes | seminated |
| T47982 | 705-710 | NCBITaxon:10239 | denotes | ailur |
| T57685 | 728-731 | UBERON:0001017 | denotes | ing |
| T17278 | 756-763 | CL:0000540 | denotes | inating |
| T57698 | 768-779 | CL:0000125 | denotes | ologies amo |
| T64355 | 806-818 | UBERON:0001016 | denotes | al white mat |
| T54808 | 895-898 | UBERON:0001017 | denotes | nte |
| T50105 | 936-946 | SP_7 | denotes | ntracerebr |
| T87508 | 1074-1082 | SP_10 | denotes | l injury |
| T16890 | 1154-1159 | NCBITaxon:10239 | denotes | failu |
| T50263 | 1185-1188 | UBERON:0001017 | denotes | inf |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 57 | 221-229 | Species | denotes | patients | Tax:9606 |
| 58 | 414-422 | Species | denotes | patients | Tax:9606 |
| 59 | 881-889 | Species | denotes | patients | Tax:9606 |
| 60 | 1111-1118 | Species | denotes | patient | Tax:9606 |
| 61 | 180-203 | Disease | denotes | Encephalitis/meningitis | MESH:D004660 |
| 62 | 245-283 | Disease | denotes | somnolent Cerebral cortex encephalitis | MESH:D006970 |
| 63 | 348-398 | Disease | denotes | shrunken neurons Correspondence [5] Encephalopathy | MESH:D001927 |
| 64 | 438-445 | Disease | denotes | myalgia | MESH:D063806 |
| 65 | 447-455 | Disease | denotes | headache | MESH:D006261 |
| 66 | 510-536 | Disease | denotes | multiorgan failure Hypoxic | MESH:D009102 |
| 67 | 596-640 | Disease | denotes | Acute disseminated encephalomyelitis Fatigue | MESH:D004673 |
| 68 | 645-663 | Disease | denotes | exertional dyspnea | MESH:D004417 |
| 69 | 692-711 | Disease | denotes | respiratory failure | MESH:D012131 |
| 70 | 848-877 | Disease | denotes | Acute cerebrovascular disease | MESH:D002561 |
| 71 | 905-923 | Disease | denotes | cerebral ischaemia | MESH:D002545 |
| 72 | 935-960 | Disease | denotes | intracerebral haemorrhage | MESH:D002543 |
| 73 | 974-993 | Disease | denotes | leukoencephalopathy | MESH:D056784 |
| 74 | 1018-1059 | Disease | denotes | encephalopathy Thrombotic microangiopathy | MESH:D057049 |
| 75 | 1064-1082 | Disease | denotes | endothelial injury | MESH:D014947 |
| 76 | 1134-1174 | Disease | denotes | coma and multiorgan failure Microthrombi | MESH:D003128 |
| 77 | 1185-1193 | Disease | denotes | infarcts | MESH:D007238 |
| 79 | 81-89 | Disease | denotes | COVID-19 | MESH:C000657245 |