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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 18833-18837 Body_part denotes hand http://purl.org/sig/ont/fma/fma9712
T2 19007-19010 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T3 19040-19045 Body_part denotes feces http://purl.org/sig/ont/fma/fma64183

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 18833-18837 Body_part denotes hand http://purl.obolibrary.org/obo/UBERON_0002398
T2 19040-19045 Body_part denotes feces http://purl.obolibrary.org/obo/UBERON_0001988

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 92-100 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 227-235 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T3 299-307 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 346-355 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T5 1649-1657 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T6 1661-1670 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T7 1791-1799 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T8 1802-1811 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T9 1815-1839 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T10 1841-1849 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T11 1879-1887 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T12 1890-1899 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T13 2005-2013 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T14 2150-2158 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T15 3638-3646 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T16 3874-3884 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T17 4464-4473 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T18 4626-4635 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T19 4971-4980 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T20 5142-5151 Disease denotes Infection http://purl.obolibrary.org/obo/MONDO_0005550
T21 10134-10143 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T22 11001-11010 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T23 11303-11312 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T24 11518-11528 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T25 12207-12220 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T26 12893-12906 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T27 13037-13047 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T28 13100-13110 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T29 13552-13561 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T30 13809-13819 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T31 14249-14262 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T32 14416-14429 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T33 14978-14991 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T34 15417-15430 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T35 15909-15919 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T36 16195-16208 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T37 16889-16902 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T38 17469-17482 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T39 18591-18604 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T40 18648-18656 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T41 18793-18801 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T42 19858-19876 Disease denotes infectious disease http://purl.obolibrary.org/obo/MONDO_0005550
T43 20465-20475 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T44 20674-20684 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T45 20761-20774 Disease denotes infections in http://purl.obolibrary.org/obo/MONDO_0005550
T46 23133-23141 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T47 23328-23336 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 129-130 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 676-677 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T3 878-879 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T4 1416-1425 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T5 1740-1752 http://purl.obolibrary.org/obo/OBI_0000245 denotes Organization
T6 1759-1762 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T7 2161-2164 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T8 2221-2224 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T9 2511-2512 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 2527-2529 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T11 3159-3160 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 4029-4030 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 4107-4108 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 4183-4184 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T15 4319-4324 http://purl.obolibrary.org/obo/CLO_0009141 denotes s (t)
T16 4319-4324 http://purl.obolibrary.org/obo/CLO_0050980 denotes s (t)
T17 4732-4736 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T18 4732-4736 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T19 4763-4767 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T20 4763-4767 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T21 4776-4780 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T22 4776-4780 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T23 4783-4787 http://purl.obolibrary.org/obo/CLO_0050160 denotes t(2)
T24 4822-4826 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T25 4822-4826 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T26 5073-5075 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T27 5402-5406 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T28 5402-5406 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T29 5553-5558 http://purl.obolibrary.org/obo/CLO_0051741 denotes C = 1
T30 5564-5569 http://purl.obolibrary.org/obo/CLO_0009287 denotes (t)=e
T31 5617-5622 http://purl.obolibrary.org/obo/CLO_0009287 denotes (t)=e
T32 6009-6013 http://purl.obolibrary.org/obo/CLO_0053001 denotes 1/14
T33 6182-6191 http://purl.obolibrary.org/obo/BFO_0000030 denotes objective
T34 6329-6331 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T35 6350-6352 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T36 6512-6516 http://purl.obolibrary.org/obo/CLO_0001625 denotes a 95
T37 6560-6561 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T38 6721-6726 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T39 6814-6819 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T40 6859-6860 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T41 6943-6948 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T42 7569-7570 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 7950-7953 http://purl.obolibrary.org/obo/CLO_0008491 denotes p×s
T44 7956-7960 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T45 7956-7960 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T46 8004-8008 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T47 8004-8008 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T48 8019-8022 http://purl.obolibrary.org/obo/CLO_0008491 denotes p×s
T49 8025-8029 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T50 8025-8029 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T51 8523-8524 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T52 8548-8549 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T53 9387-9388 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T54 9800-9804 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T55 9800-9804 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T56 9985-9986 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 10037-10041 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T58 10037-10041 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T59 10114-10115 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T60 10649-10651 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T61 10856-10860 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T62 10856-10860 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T63 10906-10910 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T64 10906-10910 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T65 11100-11102 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T66 11358-11360 http://purl.obolibrary.org/obo/CLO_0054055 denotes 71
T67 11377-11379 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T68 11503-11504 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T69 11573-11575 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T70 11882-11884 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T71 11900-11901 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T72 12119-12120 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T73 12247-12249 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T74 12755-12760 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T75 13000-13002 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T76 13019-13020 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T77 13049-13050 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T78 13232-13233 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 13337-13338 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 13597-13598 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T81 13762-13764 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T82 14592-14593 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T83 14634-14636 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T84 14749-14750 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T85 14791-14793 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T86 15098-15100 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T87 15252-15254 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T88 15775-15777 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T89 15818-15820 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T90 15946-15948 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T91 16128-16130 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T92 16289-16291 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T93 16399-16400 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T94 16429-16431 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T95 16563-16565 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T96 16606-16607 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T97 16940-16942 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T98 16975-16977 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T99 17129-17131 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T100 17540-17542 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T101 17611-17613 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T102 17785-17787 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T103 17795-17797 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T104 17824-17828 http://purl.obolibrary.org/obo/CLO_0009141 denotes s(t)
T105 17824-17828 http://purl.obolibrary.org/obo/CLO_0050980 denotes s(t)
T106 17905-17906 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T107 17943-17945 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T108 18026-18028 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T109 18282-18283 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T110 18383-18385 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T111 18393-18395 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T112 18398-18399 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T113 18499-18501 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T114 18632-18634 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T115 18657-18660 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T116 18668-18669 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T117 18683-18686 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T118 18804-18809 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T119 18920-18925 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T120 19047-19049 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T121 19368-19369 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T122 20274-20275 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T123 20910-20911 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T124 21098-21099 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T125 21178-21187 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T126 21252-21253 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T127 21352-21357 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T128 21504-21505 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T129 21568-21574 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T130 22223-22226 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T131 22381-22386 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T132 22919-22924 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T133 23264-23265 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-110 Sentence denotes City lockdown and nationwide intensive community screening are effective in controlling the COVID-19 epidemic:
T2 111-149 Sentence denotes Analysis based on a modified SIR model
T3 150-244 Sentence denotes City lockdown and intensive community screening are effective in controlling COVID-19 epidemic
T4 246-254 Sentence denotes Abstract
T5 255-265 Sentence denotes Background
T6 266-388 Sentence denotes In December 2019, an outbreak of COVID-19 epidemic occurred in Wuhan, China and infection spread rapidly around the world.
T7 389-578 Sentence denotes To limit the rapid spread locally and nationwide, the Chinese government locked down Wuhan city on January 23 and began implementing nationwide intensive community screening on February 16.
T8 580-586 Sentence denotes Method
T9 587-750 Sentence denotes To assess the effectiveness of city lockdown and intensive community screening, we built a modified SIR model by introducing an α value into the classic SIR model.
T10 751-897 Sentence denotes The α value represents the proportion of infected individuals who are not effectively isolated from susceptible individuals at a given time point.
T11 899-906 Sentence denotes Results
T12 907-1009 Sentence denotes The accuracy of the modified SIR model was validated using data from Guangdong and Zhejiang provinces.
T13 1010-1180 Sentence denotes The lockdown of Wuhan city substantially reduced the α value for the rest of China excluding Hubei province, while only slightly reducing the α value for the city itself.
T14 1181-1249 Sentence denotes Intensive community screening rapidly reduced the α value for Wuhan.
T15 1251-1261 Sentence denotes Conclusion
T16 1262-1370 Sentence denotes City lockdown was efficient in controlling the spread of the epidemic from Wuhan to the rest of the country.
T17 1371-1488 Sentence denotes Nationwide intensive community screening was extremely effective in suppressing the spread locally within Wuhan city.
T18 1489-1602 Sentence denotes These experiences should urgently be shared with other countries to help halt the progressing worldwide pandemic.
T19 1604-1614 Sentence denotes Background
T20 1615-1722 Sentence denotes An outbreak of novel coronavirus (SARS-CoV-2) infection occurred in Wuhan city, China in December 2019 [1].
T21 1723-1851 Sentence denotes The World Health Organization (WHO) has named the disease caused by SARS-CoV-2 infection as coronavirus disease 2019 (COVID-19).
T22 1852-1949 Sentence denotes No specific medication for SARS-CoV-2 infection is currently available, only supportive care [2].
T23 1950-2110 Sentence denotes On July 16, 2020, the cumulative number of people with COVID-19 exceeded 13,150,000 around the world, and the official reported death toll exceeded 574,000 [3].
T24 2111-2280 Sentence denotes Although cross-species transmission of SARS-CoV-2 has not been clarified, rapid person-to-person transmission has been linked to the Huanan Wholesale Seafood Market [4].
T25 2281-2432 Sentence denotes The outbreak began immediately before the traditional Chinese New Year, when mass migration occurs every year, facilitating the spread of the epidemic.
T26 2433-2627 Sentence denotes Making the situation worse, Wuhan is one of the largest cities in China, with a population of 11 million and an extensive transportation system including flights, express trains and local buses.
T27 2628-2790 Sentence denotes The epidemic overwhelmed the healthcare system of Wuhan city in early February and caused more than 3000 deaths of healthcare workers in China by early March [5].
T28 2791-2902 Sentence denotes To halt this serious public health event, the Chinese government implemented two stringent mitigation measures:
T29 2903-3008 Sentence denotes Wuhan city lockdown at the end of January and nationwide intensive community screening in early February.
T30 3009-3250 Sentence denotes The present study was carried out in an early stage of the epidemic in China and was meant to measure the effectiveness of these two measures through a modified SIR model and to make predictions about the first wave of the epidemic in China.
T31 3251-3366 Sentence denotes First, we validated the accuracy of the model using real-world data from Guangdong and Zhejiang provinces in China.
T32 3367-3453 Sentence denotes Second, we used the validated model to evaluate the effectiveness of the two measures.
T33 3454-3593 Sentence denotes Our model predicted that the first wave of the epidemic would come under control in early June, which closely approximates real-world data.
T34 3595-3602 Sentence denotes Methods
T35 3604-3615 Sentence denotes Data source
T36 3616-3852 Sentence denotes The reported cases of COVID-19 were collected from December 8, 2019 to March 12, 2020 using Tencent real-time tracking [6], Ifeng real-time tracking [7] and data from the National Health Commission of the People’s Republic of China [8].
T37 3853-4003 Sentence denotes Our data include new infections, new cures, new deaths, daily recoveries, cumulative diagnoses, cumulative discharges, and cumulative deaths each day.
T38 4004-4092 Sentence denotes Because our data were on a daily basis, our model was iterated to produce daily results.
T39 4094-4128 Sentence denotes Establishing a classical SIR model
T40 4129-4303 Sentence denotes The present study used the classic SIR model to build a mathematical model, where S represents susceptible individuals; I, infected individuals; and R, recovered individuals.
T41 4304-4432 Sentence denotes Suppose i (t), s (t) and r (t) represent the numbers of infected, uninfected and recovered individuals, respectively, at time t.
T42 4433-4668 Sentence denotes Meanwhile, the effective daily infection rate β is defined as λ×p, where λ is the number of infected and healthy individuals’ effective contacts with infected individuals per day, and p is the infection probability during each contact.
T43 4669-4954 Sentence denotes The model equations were established to be i(t+Δt)−i(t)=i(t)×β×s(t)N×Δt−i(t)×μ×Δt(1) s(t+Δt)−s(t)=−i(t)×β×s(t)N×Δt(2) r(t+Δt)−r(t)=i(t)×μ×Δt(3) where s(t)N represents the proportion of healthy individuals involved in the effective contacts, since only they can transmit the disease.
T44 4956-4994 Sentence denotes Calculation of infection probability p
T45 4995-5141 Sentence denotes We calculated p using the first available local data from Wuhan city (January 18, 2020) and extending until the city lockdown on January 23, 2020.
T46 5142-5280 Sentence denotes Infection number was calculated as the cumulative number of confirmed cases minus the cumulative number of hospital discharges and deaths.
T47 5281-5381 Sentence denotes Based on the initial i (t) and real-time i (t) during this period, the value of p in i(t) was found.
T48 5382-5455 Sentence denotes Since the initial N≈s(t), we can simplify (1) to get: didt=(β−μ)×i(t).(4)
T49 5456-5529 Sentence denotes According to (4), the expression i(t) can be obtained: i(t)=C×e(β−μ)t.(5)
T50 5530-5579 Sentence denotes Because i(0) = 1, then C = 1 and i(t)=e(β−μ)t.(6)
T51 5580-5633 Sentence denotes Substituting β = λ×p into (6) gives i(t)=e(λp−μ)t.(7)
T52 5634-5769 Sentence denotes We assumed the number of effective daily contacts per infected person was 5 (i.e. λ = 5), according to the estimation by Kucharski [9].
T53 5770-6014 Sentence denotes According to Chinese statistics, the average length of hospitalization was 20 days in Wuhan city and 9 days outside Hubei, so the average length of hospitalization was ⌊20+92⌋=14 days. μ (Mu) is defined as recovery rate and thus, μ (Mu) = 1/14.
T54 6015-6142 Sentence denotes Because the first case was found on December 8, 2019, the value of “t” was the difference between that date and the given date.
T55 6143-6289 Sentence denotes These considerations led to the fitted objective function min∑tϵT(e(β−μ)t−I(t))2 where I (t) is the number of patients on t days after December 8.
T56 6290-6378 Sentence denotes Based on data from Wuhan from December 18, 2019 to December 22, 2019, we found β = 0.20.
T57 6379-6428 Sentence denotes Since β = λ×p, we found p = 0.040 and R0 = 2.805.
T58 6429-6545 Sentence denotes This value of p was determined from real-world Hubei data, so we did not calculate a 95% confidence interval for it.
T59 6547-6580 Sentence denotes Establishing a modified SIR model
T60 6581-6734 Sentence denotes Two conditions were imposed in order to allow the above SIR model to take into account the Chinese government’s drastic measures to contain virus spread.
T61 6735-6850 Sentence denotes First, isolated infected individuals were assumed to be unable to transmit the virus to others but able to recover.
T62 6851-6978 Sentence denotes Second, a certain proportion of infected individuals was assumed to be able to transmit the virus to others without limitation.
T63 6979-7110 Sentence denotes These two conditions would alter the daily number of effective contacts between an infected individual and healthy individuals (λ).
T64 7111-7316 Sentence denotes In order to capture these changes in the model, we introduced the coefficient of proportionality α value into the abovementioned classical SIR model. i(t)×α represents the patients who are not quarantined.
T65 7317-7498 Sentence denotes If disease detection is effective, then α ≤ 1, or if there are some undetected cases, then α > 1 and i(t)×α represents both detected and undetected patients who are not quarantined.
T66 7499-7712 Sentence denotes In either case, the implementation of effective measures will lead to a decrease in α, and the larger the decrease in α, the higher the proportion of patients in quarantine, suggesting better efficacy of measures.
T67 7713-7891 Sentence denotes After α was introduced into formulas (1)-(3), i(t)×(1−α)×μ×Δt was replaced by daily_recover_num(t), which is the true number of recovered patients obtained from public databases.
T68 7892-8081 Sentence denotes This led to the following formulas: i(t+Δt)−i(t)=i(t)×α×λ×p×s(t)s(t)+i(t)×α×Δt−daily_recover_num(t)(8) s(t+Δt)−s(t)=−i(t)×α×λ×p×s(t)s(t)+i(t)×α×Δt(9) r(t+Δt)−r(t)=daily_recover_num(t)(10)
T69 8082-8230 Sentence denotes We used (9) to calculate the value of α, where λ = 5, other parameters are defined by real-world data, and t and t+Δt refer to two consecutive days.
T70 8231-8355 Sentence denotes We defined the target date as the time point t+Δt, and the α value of t+Δt was defined as the average α value of t and t+Δt.
T71 8356-8525 Sentence denotes For example, to measure the α trend, we first calculated the true α value of the target day as αt, then we calculated the α value of the day before the target day as αb.
T72 8526-8578 Sentence denotes Finally we took α = (αb+αt)/2 as the target day’s α.
T73 8579-8637 Sentence denotes We reasoned that this approach might increase fit accuracy
T74 8638-8752 Sentence denotes We also predicted future daily recovery numbers (daily_recover_num(t+Δt)) based on current daily recovery numbers.
T75 8753-8843 Sentence denotes The resulting (daily_recover_num(t+Δt) was used together with the α value to predict i(t).
T76 8844-8967 Sentence denotes We calculated future numbers of cured people every day (daily_recover_num(t)) from the cumulative number of cured people φ.
T77 8969-8995 Sentence denotes Prediction of new α values
T78 8996-9064 Sentence denotes The prediction of cumulative cases requires an α value for each day.
T79 9065-9209 Sentence denotes To predict the α value for M days starting from day T, we selected the real α values for n days from day T-n until day T-1 and fitted its trend.
T80 9210-9324 Sentence denotes Usually an n between 10 and 15 was required, and the trend of α value for the n days was used to fit the function.
T81 9325-9378 Sentence denotes In the same way, we fitted and predicted the φ value.
T82 9379-9568 Sentence denotes We used a polynomial function to fit the trends in α and φ values based on the “curve_fit” algorithm and its default loss function in packages of scipy.optimize and poly of numpy in Python.
T83 9570-9659 Sentence denotes Predicting infected cases using the predicted α value and predicted daily-recovered value
T84 9660-9759 Sentence denotes Based on the α and φ values predicted above, we built an iterative model according to Eqs (8)–(10).
T85 9760-9958 Sentence denotes We substituted the previous day’s i(t), s(t), and r(t) into the model, used the predicted φ value to calculate daily_recover_num(t), and incorporated the predicted α values and daily_recover_num(t).
T86 9959-10052 Sentence denotes Each time we incorporated a predicted value, we obtained the next day’s i(t), s(t), and r(t).
T87 10053-10177 Sentence denotes Repetition for n values of α and daily_recover_num(t) led to a prediction of the infection cases (i(t)) for the next n days.
T88 10179-10186 Sentence denotes Results
T89 10188-10224 Sentence denotes Validation of the modified SIR model
T90 10225-10318 Sentence denotes We made predictions for Guangdong and Zhejiang provinces to verify the accuracy of the model.
T91 10319-10526 Sentence denotes Data of Guangdong and Zhejiang from February 3 to February 12 were used to fit the trend of φ values, and data of Guangdong and Zhejiang from February 8 to February 12 were used to fit the trend of α values.
T92 10527-10652 Sentence denotes Then the fitted trend was used to predict the α value from February 13 to March 10 and φ values from February 13 to March 11.
T93 10653-10731 Sentence denotes The predicted φ values were used to calculate the values of daily_recover_num.
T94 10732-10933 Sentence denotes Then the predicted α values and values of daily_recover_num were integrated into the modified SIR model along with the i(t),s(t), and r(t) of February 13 to predict the i(t),s(t), and r(t) on each day.
T95 10934-11197 Sentence denotes As shown in Fig 1, the predicted α values, φ values and numbers of infection cases in Guangdong and Zhejiang provinces agreed well with the real numbers before March 11, and the predicted α values decreased sharply after the implementation of Wuhan city lockdown.
T96 11198-11247 Sentence denotes These results indicate the accuracy of the model.
T97 11248-11607 Sentence denotes However, the predicted cases were higher than the real infection cases in Guangdong (87 vs. 68) and Zhejiang (71 vs. 6) on March 11, which may be due to the delayed effect of nationwide intensive community screening, which began on February 16 and caused a reduction in infections starting about 10 days later (from February 27), further reducing the α value.
T98 11608-11701 Sentence denotes Fig 1 Validation of the modified SIR model using data from Guangdong and Zhejiang provinces.
T99 11702-11920 Sentence denotes The φ values from February 3 to February 12 (before nationwide intensive community screening but after Wuhan city lockdown) were used to predict φ values from February 13 to March 11 for Guangdong (A) and Zhejiang (D).
T100 11921-12139 Sentence denotes The α values from February 8 to February 12 (before nationwide intensive community screening but after Wuhan city lockdown) were used to predict α values from February 13 to March 10 for Guangdong (B) and Zhejiang (E).
T101 12140-12285 Sentence denotes Predicted α values and φ values were used to predict the number of infections in from February 14 to March 11 for Guangdong (C) and Zhejiang (F).
T102 12287-12369 Sentence denotes Evaluation of the effectiveness of city lockdown and intensive community screening
T103 12370-12569 Sentence denotes We calculated α values for Wuhan city and China excluding Hubei (Fig 2), and found that the α value of Wuhan decreased slightly after city lockdown (from 0.869 on January 23 to 0.228 on February 16).
T104 12570-12703 Sentence denotes However, the α value of China excluding Hubei decreased steadily after January 23 (from 5.563 on January 23 to 0.064 on February 16).
T105 12704-12850 Sentence denotes These results suggest that the rapid spread of the virus from Wuhan to other cities was effectively suppressed, but not the local spread in Wuhan.
T106 12851-13003 Sentence denotes Fig 2 Real-world α values and numbers of infections in Wuhan city from January 20 to March 10 and in China excluding Hubei from January 23 to March 11.
T107 13004-13140 Sentence denotes Real α values (A) and numbers of infections (B) in Wuhan city; real α values (C) and numbers of infections (D) in China excluding Hubei.
T108 13141-13428 Sentence denotes The nationwide intensive community screening (starting on February 16) was associated with a significant decrease in the α value of Wuhan city (from 0.228 on February 16 to 0.003 on March 10) and a stable α value of China excluding Hubei (from 0.064 on February 16 to 0.079 on March 10).
T109 13429-13593 Sentence denotes This suggests that intensive community screening significantly enhanced the effectiveness of Wuhan city isolation and kept infection levels stable in other regions.
T110 13594-13773 Sentence denotes As a result, the infected cases decreased significantly in Wuhan and China excluding Hubei, from 36385 and 8163 on February 16, respectively, to 13462 and 493 on March 11 (Fig 2).
T111 13774-13880 Sentence denotes Next, we predicted the increase in infections, supposing that the two measures had never been implemented.
T112 13881-14068 Sentence denotes To assess the impacts of city lockdown on Wuhan, the lowest α value before January 23 was set as the α value before city lockdown, and we made the same assumption for the recovery number.
T113 14069-14173 Sentence denotes Infections in Wuhan were predicted from January 24 to February 15 using simulated α values and φ values.
T114 14174-14244 Sentence denotes Similar analyses were performed using data from China excluding Hubei.
T115 14245-14368 Sentence denotes The infections in Wuhan city and China excluding Hubei were predicted to be 36241 and 129269, respectively, on February 15.
T116 14369-14509 Sentence denotes In reality, with city lockdown, the numbers of infections in Wuhan city and China excluding Hubei were 36547 and 8533, respectively (Fig 3).
T117 14510-14590 Sentence denotes Fig 3 Impact of city lockdown on Wuhan city and China excluding Hubei province.
T118 14591-15493 Sentence denotes (A) The φ values for Wuhan city at January 22 (before city lockdown) were used to predict the φ values from January 23 to February 15 without city lockdown. (B) The α values for Wuhan city at January 22 (before city lockdown) were used to predict the α values from January 23 to February 14 without city lockdown. (C) Predicted α values and φ values were used to calculate the number of infections in Wuhan city from January 24 to February 15. (D) The φ values for China excluding Hubei province on January 22 were used to predict the φ values from January 23 to February 15 without city lockdown. (E) The α values for China excluding Hubei province on January 22 were used to predict the α values from January 23 to February 14 without city lockdown. (F) Predicted α values and φ values were used to calculate the numbers of infections in China excluding Hubei province from January 24 to February 15.
T119 15494-15589 Sentence denotes Similar analyses were performed to evaluate the effectiveness of intensive community screening.
T120 15590-15836 Sentence denotes For Wuhan city and China excluding Hubei, the α values from February 16 to March 10 were predicted using data from February 6 to February 15, and the φ values from February 16 to March 11 were predicted using data from February 11 to February 15.
T121 15837-16016 Sentence denotes Then we used the predicted α values to calculate daily_recover_num, and infections from February 16 to March 11 were modeled using the predicted values of α and daily_recover_num.
T122 16017-16131 Sentence denotes Infections in Wuhan city and China excluding Hubei were predicted to be 116003 and 388, respectively, on March 11.
T123 16132-16300 Sentence denotes In reality, with intensive community screening, the numbers of infections in Wuhan city and China excluding Hubei were 15892 and 610, respectively, on March 11 (Fig 4).
T124 16301-16397 Sentence denotes Fig 4 Impact of intensive community screening on Wuhan city and China excluding Hubei province.
T125 16398-17543 Sentence denotes (A) The φ values from February 11 to February 15 (before intensive community screening) were fitted to predict the φ values for Wuhan city from February 16 to March 11 without intensive community screening. (B) The α values from February 6 to February 15 (before intensive community screening) were fitted to predict the α values for Wuhan city from February 16 to March 10 without intensive community screening. (C) The predicted α values and φ values were used to calculate the numbers of infections in Wuhan city from February 16 to March 11. (D) The φ values from February 11 to February 15 (before intensive community screening) were fitted to predict the φ values for China excluding Hubei Province from February 16 to March 11 without intensive community screening. (E) The α values for China excluding Hubei Province from February 6 to February 15 were used to predict the α values for China excluding Hubei Province from February 16 to March 10 without intensive community screening. (F) The predicted α values and φ values were used to calculate the numbers of infections in China excluding Hubei Province from February 16 to March 11.
T126 17545-17586 Sentence denotes Prediction of the epidemic trend in China
T127 17587-17690 Sentence denotes The α values from March 11 to May 26 were obtained by fitting the α values from January 23 to March 10.
T128 17691-17798 Sentence denotes We also used the higher φ values in the late phase of epidemic to predict φ values from March 11 to May 27.
T129 17799-17955 Sentence denotes Taking the initial i(t), s(t), and r(t) as the values on March 10, we predicted the number of patients on a given day i(t) from March 12 to May 27. (Fig 5).
T130 17956-18115 Sentence denotes We collected data on the actual number of patients in China up to May 27, and plotted the curve to compare with the predicted results for the same time period.
T131 18116-18199 Sentence denotes The predicted trend showed only slight deviation from the real-world trend (Fig 5).
T132 18200-18280 Sentence denotes Fig 5 Comparison of predicted and actual numbers of epidemic patients in China.
T133 18281-18635 Sentence denotes (A) The φ values from January 25 to March 10 were fitted to predict the φ values for China from March 11 to May 27. (B) The α values from January 23 to March 10 were fitted to predict the α values for China from March 11 to May 26. (C) The predicted α values and φ values were used to calculate the numbers of infections in China from March 12 to May 27.
T134 18637-18647 Sentence denotes Discussion
T135 18648-18731 Sentence denotes COVID-19 has become a pandemic and has led to incalculable losses around the world.
T136 18732-18915 Sentence denotes At the beginning of the pandemic, little was known about the SARS-CoV-2 virus and many believed that hand hygiene was the most important way to prevent the public from being infected.
T137 18916-19051 Sentence denotes The virus was reported to be able to persist on certain surfaces for hours [10], and viral RNA was even detected in patient feces [11].
T138 19052-19241 Sentence denotes As the epidemic worsened, there is evidence shown that wearing facemask by public, especially in conjunction with social distancing, is important to contain the community transmission [12].
T139 19242-19355 Sentence denotes More and more health workers and scientists suggested that people wear facemasks when entering public areas [13].
T140 19356-19511 Sentence denotes This led to a global shortage of facemasks during the early pandemic; even healthcare providers were unable to obtain sufficient N95 or surgical facemasks.
T141 19512-19643 Sentence denotes This situation made social distancing crucial for halting transmission and relieving pressure on the overwhelmed healthcare system.
T142 19644-19777 Sentence denotes The Chinese government implemented the Wuhan city lockdown and nationwide intensive community screening to enforce social distancing.
T143 19778-19883 Sentence denotes We were interested in studying the effectiveness of these two measures using an infectious disease model.
T144 19884-20003 Sentence denotes Based on the classical SIR model in epidemiology, R0 was calculated as 2.80, which is similar to other studies [14–19].
T145 20004-20202 Sentence denotes However, this model could not be used to predict the development of an epidemic in which the government adopted drastic measures to promote isolation of infected individuals and their close contact.
T146 20203-20374 Sentence denotes Therefore, we introduced here the α value into the SIR model, which is a scaling factor of i(t), such that α×i(t) indicates the number of patients who are not quarantined.
T147 20375-20529 Sentence denotes The results show that this modified SIR model is highly accurate at predicting numbers of infections, based on data from Zhejiang and Guangzhou provinces.
T148 20530-20648 Sentence denotes Next the modified SIR model was used to evaluate the effectiveness of city lockdown and intensive community screening.
T149 20649-20909 Sentence denotes The predicted numbers of infections without those mitigation measures were much higher than the real numbers of infections in Wuhan and China excluding Hubei, suggesting that the two mitigation measures were effective in suppressing the spread of the epidemic.
T150 20910-20994 Sentence denotes A step-wise reduced α value may reflect effective isolation of infected individuals.
T151 20995-21155 Sentence denotes Specifically, Wuhan city lockdown largely decreased the α value of China excluding Hubei by containing a large proportion of infected individuals in Wuhan city.
T152 21156-21390 Sentence denotes Hospital beds were in extremely short supply at the beginning of the epidemic, which meant that a large proportion of infected individuals returned to the community, where they could transmit the virus to family members and neighbors.
T153 21391-21516 Sentence denotes Intensive community screening, in turn, significantly decreased the α value locally in Wuhan city and kept it at a low level.
T154 21517-21757 Sentence denotes This is probably because when screened individuals tested positive, they were notified and advised to self-quarantine at home or, if they lived with several others, to self-quarantine in newly built medical centers or quarantine facilities.
T155 21758-21873 Sentence denotes At the same time, people living in close contact with the positive individual were also advised to self-quarantine.
T156 21874-21940 Sentence denotes These steps appear to have been effective at reducing the α value.
T157 21941-22038 Sentence denotes Although our model approximated real-world data well, it deviated slightly between March and May.
T158 22039-22139 Sentence denotes This may be related to imported cases, which may cause the real α value to exceed the predicted one.
T159 22140-22212 Sentence denotes By the end of June, over 1800 imported cases had been reported in China.
T160 22213-22239 Sentence denotes Our study has limitations.
T161 22240-22320 Sentence denotes First, this modified SIR model predicts the α values based on the current trend.
T162 22321-22473 Sentence denotes If major disturbances occur in the future, such as critical virus mutation or new measures from the government, the existing model may be less accurate.
T163 22474-22589 Sentence denotes Second, the two measures of city lockdown and nationwide community screening may not be suitable for every country.
T164 22590-22686 Sentence denotes Some countries advocate allowing the development of herd immunity without stringent mitigations.
T165 22687-22766 Sentence denotes However, this approach may be inappropriate for countries as populous as China.
T166 22767-22932 Sentence denotes Many countries may not be able to achieve stringent city lockdowns or intensive community screening due to concerns over violating personal privacy and human rights.
T167 22933-23217 Sentence denotes Nevertheless, it may be possible to use “softer” approaches to achieve social distancing and rapid isolation of potentially infected individuals, such as educating the public about the seriousness of COVID-19 and asking individuals with suspected symptoms to strictly self-quarantine.
T168 23218-23346 Sentence denotes Despite these limitations, our study presents a reliable modified SIR model to predict the development of the COVID-19 epidemic.
T169 23347-23558 Sentence denotes Based on this model, city lockdown is effective at blocking the spread from the epidemic area into other cities, while intensive community screening may cut off infected individuals from susceptible individuals.
T170 23559-23612 Sentence denotes These two measures greatly improve social distancing.
T171 23613-23660 Sentence denotes Global efforts are needed to halt the pandemic.
T172 23661-23750 Sentence denotes Here we shared our experiences with implementing social distancing at the national level.
T173 23751-23841 Sentence denotes Other countries should tailor their social distancing strategies to their local situation.
T174 23843-23922 Sentence denotes We would like to thank staff at West China Hospital for thoughtful discussions.

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 92-100 Disease denotes COVID-19 MESH:C000657245
4 299-307 Disease denotes COVID-19 MESH:C000657245
5 346-355 Disease denotes infection MESH:D007239
7 792-800 Disease denotes infected MESH:D007239
20 1630-1647 Species denotes novel coronavirus Tax:2697049
21 1649-1659 Species denotes SARS-CoV-2 Tax:2697049
22 1993-1999 Species denotes people Tax:9606
23 2150-2160 Species denotes SARS-CoV-2 Tax:2697049
24 1661-1670 Disease denotes infection MESH:D007239
25 1791-1811 Disease denotes SARS-CoV-2 infection MESH:C000657245
26 1815-1839 Disease denotes coronavirus disease 2019 MESH:C000657245
27 1841-1849 Disease denotes COVID-19 MESH:C000657245
28 1879-1899 Disease denotes SARS-CoV-2 infection MESH:C000657245
29 2005-2013 Disease denotes COVID-19 MESH:C000657245
30 2078-2083 Disease denotes death MESH:D003643
31 2733-2739 Disease denotes deaths MESH:D003643
37 3821-3827 Species denotes People Tax:9606
38 3638-3646 Disease denotes COVID-19 MESH:C000657245
39 3874-3884 Disease denotes infections MESH:D007239
40 3901-3907 Disease denotes deaths MESH:D003643
41 3987-3993 Disease denotes deaths MESH:D003643
43 4252-4260 Disease denotes infected MESH:D007239
49 4360-4368 Disease denotes infected MESH:D007239
50 4464-4473 Disease denotes infection MESH:D007239
51 4525-4533 Disease denotes infected MESH:D007239
52 4583-4591 Disease denotes infected MESH:D007239
53 4626-4635 Disease denotes infection MESH:D007239
55 4971-4980 Disease denotes infection MESH:D007239
58 5142-5151 Disease denotes Infection MESH:D007239
59 5273-5279 Disease denotes deaths MESH:D003643
63 5716-5721 Gene denotes λ = 5 Gene:3543
64 6000-6013 Gene denotes μ (Mu) = 1/14 Gene:2944
65 5688-5696 Disease denotes infected MESH:D007239
67 6253-6261 Species denotes patients Tax:9606
71 6751-6759 Disease denotes infected MESH:D007239
72 6883-6891 Disease denotes infected MESH:D007239
73 7062-7070 Disease denotes infected MESH:D007239
77 7283-7291 Species denotes patients Tax:9606
78 7465-7473 Species denotes patients Tax:9606
79 7649-7657 Species denotes patients Tax:9606
81 7851-7859 Species denotes patients Tax:9606
84 8550-8555 Gene denotes αt)/2 Gene:186
85 8129-8134 Gene denotes λ = 5 Gene:3543
88 8882-8888 Species denotes people Tax:9606
89 8958-8964 Species denotes people Tax:9606
91 9581-9589 Disease denotes infected MESH:D007239
93 10134-10143 Disease denotes infection MESH:D007239
97 11001-11010 Disease denotes infection MESH:D007239
98 11303-11312 Disease denotes infection MESH:D007239
99 11518-11528 Disease denotes infections MESH:D007239
101 12207-12217 Disease denotes infections MESH:D007239
103 12893-12903 Disease denotes infections MESH:D007239
106 13037-13047 Disease denotes infections MESH:D007239
107 13100-13110 Disease denotes infections MESH:D007239
110 13552-13561 Disease denotes infection MESH:D007239
111 13611-13619 Disease denotes infected MESH:D007239
116 13809-13819 Disease denotes infections MESH:D007239
117 14069-14079 Disease denotes Infections MESH:D007239
118 14249-14259 Disease denotes infections MESH:D007239
119 14416-14426 Disease denotes infections MESH:D007239
122 14978-14988 Disease denotes infections MESH:D007239
123 15417-15427 Disease denotes infections MESH:D007239
127 15909-15919 Disease denotes infections MESH:D007239
128 16017-16027 Disease denotes Infections MESH:D007239
129 16195-16205 Disease denotes infections MESH:D007239
132 16889-16899 Disease denotes infections MESH:D007239
133 17469-17479 Disease denotes infections MESH:D007239
136 17893-17901 Species denotes patients Tax:9606
137 17998-18006 Species denotes patients Tax:9606
139 18262-18270 Species denotes patients Tax:9606
141 18591-18601 Disease denotes infections MESH:D007239
147 18793-18803 Species denotes SARS-CoV-2 Tax:2697049
148 19032-19039 Species denotes patient Tax:9606
149 19301-19307 Species denotes people Tax:9606
150 18648-18656 Disease denotes COVID-19 MESH:C000657245
151 18906-18914 Disease denotes infected MESH:D007239
156 20341-20349 Species denotes patients Tax:9606
157 19858-19876 Disease denotes infectious disease MESH:D003141
158 20157-20165 Disease denotes infected MESH:D007239
159 20465-20475 Disease denotes infections MESH:D007239
166 21776-21782 Species denotes people Tax:9606
167 20674-20684 Disease denotes infections MESH:D007239
168 20761-20771 Disease denotes infections MESH:D007239
169 20973-20981 Disease denotes infected MESH:D007239
170 21120-21128 Disease denotes infected MESH:D007239
171 21274-21282 Disease denotes infected MESH:D007239
175 22919-22924 Species denotes human Tax:9606
176 23057-23065 Disease denotes infected MESH:D007239
177 23133-23141 Disease denotes COVID-19 MESH:C000657245
180 23328-23336 Disease denotes COVID-19 MESH:C000657245
181 23508-23516 Disease denotes infected MESH:D007239

2_test

Id Subject Object Predicate Lexical cue
32857824-30909770-94270841 1719-1720 30909770 denotes 1
32857824-31978945-94270842 2277-2278 31978945 denotes 4
32857824-32182409-94270843 18992-18994 32182409 denotes 10
32857824-32355904-94270844 19237-19239 32355904 denotes 12
32857824-32097725-94270845 19996-19998 32097725 denotes 14
32857824-32014114-94270845 19996-19998 32014114 denotes 14