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PMC:7445716 / 9165-10279 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T15 481-486 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T16 900-905 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T7 481-486 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T8 900-905 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T112 13-16 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T113 64-72 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T114 126-134 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T115 203-212 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T116 265-272 Disease denotes anosmia http://purl.obolibrary.org/obo/MONDO_0010528
T117 293-301 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T118 403-412 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T119 468-477 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T120 588-596 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T121 747-755 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T122 994-1002 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T123 1016-1025 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T124 1080-1088 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T56 180-182 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T57 251-256 http://purl.obolibrary.org/obo/CLO_0001004 denotes 16/72
T58 481-486 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T59 563-565 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T60 571-573 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T61 579-581 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T62 583-585 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T63 688-693 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T64 728-734 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T65 900-905 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
184 436-443 Species denotes patien Tax:9606
185 532-540 Species denotes patient Tax:9606
186 587-597 Species denotes SARS-CoV- Tax:2697049
187 718-726 Species denotes patient Tax:9606
188 746-756 Species denotes SARS-CoV- Tax:2697049
189 775-783 Species denotes patient Tax:9606
190 841-854 Species denotes not specifie Tax:32644
191 63-71 Disease denotes COVID-1 MESH:C000657245
192 125-133 Disease denotes COVID-1 MESH:C000657245
193 143-148 Disease denotes feve MESH:D005334
194 165-170 Disease denotes coug MESH:D003371
195 187-194 Disease denotes dyspne MESH:D004417
196 202-211 Disease denotes pneumoni MESH:D011014
197 234-241 Disease denotes /ageusi MESH:D000370
198 264-271 Disease denotes /anosmi MESH:D000857
199 292-300 Disease denotes diarrhe MESH:D003967
200 370-375 Disease denotes feve MESH:D005334
201 377-397 Disease denotes respiratory symptom MESH:D012818
202 402-411 Disease denotes pneumoni MESH:D011014
203 467-476 Disease denotes pneumoni MESH:D011014
204 993-1024 Disease denotes COVID-19 interstitial pneumoni MESH:C000657245
205 1079-1087 Disease denotes COVID-1 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T69 0-95 Sentence denotes All reported GBS cases (n = 72) except two were symptomatic for COVID-19 with various severity.
T70 96-317 Sentence denotes Most common manifestations of COVID-19 included fever (73.6%, 53/72), cough (72.2%, 52/72), dyspnea and/or pneumonia (63.8%, 46/72), hypo-/ageusia (22.2%, 16/72), hypo-/anosmia (20.8%, 15/72), and diarrhea (18.1%, 13/72).
T71 318-517 Sentence denotes One of the two asymptomatic subjects never developed fever, respiratory symptoms, or pneumonia [10], whereas the other patient showed an asymptomatic pneumonia at chest computed tomography (CT) [12].
T72 518-694 Sentence denotes In all but six patients with available data [22, 24, 36, 44, 45, 52], SARS-CoV-2 RT-PCR with naso- or oropharyngeal swab or fecal exam was positive at first or following tests.
T73 695-767 Sentence denotes Nevertheless, these six patients tested positive at SARS-CoV-2 serology.
T74 768-865 Sentence denotes In four patients, the laboratory exam for the diagnostic confirmation was not specified [20, 40].
T75 866-1052 Sentence denotes Typical “ground glass” aspects at chest-CT or similar findings at CT, Magnetic Resonance Imaging (MRI) or X-ray compatible with COVID-19 interstitial pneumonia were reported in 40 cases.
T76 1053-1114 Sentence denotes The detailed therapies for COVID-19 are described in Table 1.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T26 144-149 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T27 166-171 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T28 188-195 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T29 203-212 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T30 235-242 Phenotype denotes ageusia http://purl.obolibrary.org/obo/HP_0041051
T31 265-272 Phenotype denotes anosmia http://purl.obolibrary.org/obo/HP_0000458
T32 293-301 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T33 371-376 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T34 403-412 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T35 468-477 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T36 1016-1025 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T78 64-72 SP_7 denotes COVID-19
T79 126-134 SP_7 denotes COVID-19
T80 378-389 UBERON:0001004 denotes respiratory
T81 481-486 UBERON:0001443 denotes chest
T82 588-598 SP_7 denotes SARS-CoV-2
T83 611-615 UBERON:0000004 denotes naso
T84 620-633 UBERON:0001179 denotes oropharyngeal
T85 642-647 UBERON:0000981 denotes fecal
T86 747-757 SP_7 denotes SARS-CoV-2
T87 900-905 UBERON:0001443 denotes chest
T88 994-1002 SP_7 denotes COVID-19
T89 1003-1015 UBERON:0005169 denotes interstitial
T90 1080-1088 SP_7 denotes COVID-19

2_test

Id Subject Object Predicate Lexical cue
32840686-32588185-63205645 413-415 32588185 denotes [1
32840686-32814611-63205646 512-514 32814611 denotes [1
32840686-32749602-63205647 562-564 32749602 denotes [2
32840686-32558002-63205648 566-568 32558002 denotes 2
32840686-32753154-63205649 570-572 32753154 denotes 3
32840686-32503084-63205650 574-576 32503084 denotes 4
32840686-32638112-63205651 578-580 32638112 denotes 4
32840686-32302082-63205652 582-584 32302082 denotes 5
32840686-32761914-63205653 856-858 32761914 denotes [2