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PMC:7445716 / 9112-10279 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T15 534-539 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576
T16 953-958 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T7 534-539 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443
T8 953-958 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T111 44-52 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T112 66-69 Disease denotes GBS http://purl.obolibrary.org/obo/MONDO_0016218
T113 117-125 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T114 179-187 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T115 256-265 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T116 318-325 Disease denotes anosmia http://purl.obolibrary.org/obo/MONDO_0010528
T117 346-354 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T118 456-465 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T119 521-530 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T120 641-649 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T121 800-808 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T122 1047-1055 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T123 1069-1078 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T124 1133-1141 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T56 233-235 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T57 304-309 http://purl.obolibrary.org/obo/CLO_0001004 denotes 16/72
T58 534-539 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T59 616-618 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T60 624-626 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T61 632-634 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T62 636-638 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T63 741-746 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T64 781-787 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tested
T65 953-958 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
161 43-51 Disease denotes COVID-1 MESH:C000657245
184 489-496 Species denotes patien Tax:9606
185 585-593 Species denotes patient Tax:9606
186 640-650 Species denotes SARS-CoV- Tax:2697049
187 771-779 Species denotes patient Tax:9606
188 799-809 Species denotes SARS-CoV- Tax:2697049
189 828-836 Species denotes patient Tax:9606
190 894-907 Species denotes not specifie Tax:32644
191 116-124 Disease denotes COVID-1 MESH:C000657245
192 178-186 Disease denotes COVID-1 MESH:C000657245
193 196-201 Disease denotes feve MESH:D005334
194 218-223 Disease denotes coug MESH:D003371
195 240-247 Disease denotes dyspne MESH:D004417
196 255-264 Disease denotes pneumoni MESH:D011014
197 287-294 Disease denotes /ageusi MESH:D000370
198 317-324 Disease denotes /anosmi MESH:D000857
199 345-353 Disease denotes diarrhe MESH:D003967
200 423-428 Disease denotes feve MESH:D005334
201 430-450 Disease denotes respiratory symptom MESH:D012818
202 455-464 Disease denotes pneumoni MESH:D011014
203 520-529 Disease denotes pneumoni MESH:D011014
204 1046-1077 Disease denotes COVID-19 interstitial pneumoni MESH:C000657245
205 1132-1140 Disease denotes COVID-1 MESH:C000657245

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T68 0-52 Sentence denotes Clinical picture, diagnosis, and therapy of COVID-19
T69 53-148 Sentence denotes All reported GBS cases (n = 72) except two were symptomatic for COVID-19 with various severity.
T70 149-370 Sentence denotes Most common manifestations of COVID-19 included fever (73.6%, 53/72), cough (72.2%, 52/72), dyspnea and/or pneumonia (63.8%, 46/72), hypo-/ageusia (22.2%, 16/72), hypo-/anosmia (20.8%, 15/72), and diarrhea (18.1%, 13/72).
T71 371-570 Sentence denotes One of the two asymptomatic subjects never developed fever, respiratory symptoms, or pneumonia [10], whereas the other patient showed an asymptomatic pneumonia at chest computed tomography (CT) [12].
T72 571-747 Sentence denotes In all but six patients with available data [22, 24, 36, 44, 45, 52], SARS-CoV-2 RT-PCR with naso- or oropharyngeal swab or fecal exam was positive at first or following tests.
T73 748-820 Sentence denotes Nevertheless, these six patients tested positive at SARS-CoV-2 serology.
T74 821-918 Sentence denotes In four patients, the laboratory exam for the diagnostic confirmation was not specified [20, 40].
T75 919-1105 Sentence denotes Typical “ground glass” aspects at chest-CT or similar findings at CT, Magnetic Resonance Imaging (MRI) or X-ray compatible with COVID-19 interstitial pneumonia were reported in 40 cases.
T76 1106-1167 Sentence denotes The detailed therapies for COVID-19 are described in Table 1.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T26 197-202 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T27 219-224 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T28 241-248 Phenotype denotes dyspnea http://purl.obolibrary.org/obo/HP_0002094
T29 256-265 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T30 288-295 Phenotype denotes ageusia http://purl.obolibrary.org/obo/HP_0041051
T31 318-325 Phenotype denotes anosmia http://purl.obolibrary.org/obo/HP_0000458
T32 346-354 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T33 424-429 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T34 456-465 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T35 521-530 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T36 1069-1078 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T77 44-52 SP_7 denotes COVID-19
T78 117-125 SP_7 denotes COVID-19
T79 179-187 SP_7 denotes COVID-19
T80 431-442 UBERON:0001004 denotes respiratory
T81 534-539 UBERON:0001443 denotes chest
T82 641-651 SP_7 denotes SARS-CoV-2
T83 664-668 UBERON:0000004 denotes naso
T84 673-686 UBERON:0001179 denotes oropharyngeal
T85 695-700 UBERON:0000981 denotes fecal
T86 800-810 SP_7 denotes SARS-CoV-2
T87 953-958 UBERON:0001443 denotes chest
T88 1047-1055 SP_7 denotes COVID-19
T89 1056-1068 UBERON:0005169 denotes interstitial
T90 1133-1141 SP_7 denotes COVID-19

2_test

Id Subject Object Predicate Lexical cue
32840686-32588185-63205645 466-468 32588185 denotes [1
32840686-32814611-63205646 565-567 32814611 denotes [1
32840686-32749602-63205647 615-617 32749602 denotes [2
32840686-32558002-63205648 619-621 32558002 denotes 2
32840686-32753154-63205649 623-625 32753154 denotes 3
32840686-32503084-63205650 627-629 32503084 denotes 4
32840686-32638112-63205651 631-633 32638112 denotes 4
32840686-32302082-63205652 635-637 32302082 denotes 5
32840686-32761914-63205653 909-911 32761914 denotes [2