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PMC:7445716 / 55427-56658 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T410 36-41 Body_part denotes Brain http://purl.org/sig/ont/fma/fma50801
T411 271-275 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T412 423-434 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T413 456-459 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T414 538-545 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T415 558-568 Body_part denotes leucocytes http://purl.org/sig/ont/fma/fma62852
T416 572-576 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T417 829-833 Body_part denotes IL-1 http://purl.org/sig/ont/fma/fma86583
T418 980-991 Body_part denotes ganglioside http://purl.org/sig/ont/fma/fma82816
T419 1013-1016 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T420 1092-1099 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T421 1112-1122 Body_part denotes leucocytes http://purl.org/sig/ont/fma/fma62852
T422 1126-1130 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T423 1213-1218 Body_part denotes Brain http://purl.org/sig/ont/fma/fma50801

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T176 36-41 Body_part denotes Brain http://purl.obolibrary.org/obo/UBERON_0000955
T177 1213-1218 Body_part denotes Brain http://purl.obolibrary.org/obo/UBERON_0000955

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T538 18-24 Disease denotes Dengue http://purl.obolibrary.org/obo/MONDO_0005502
T539 501-521 Disease denotes autoimmune disorders http://purl.obolibrary.org/obo/MONDO_0007179
T540 591-599 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T541 620-624 Disease denotes AIDP http://purl.obolibrary.org/obo/MONDO_0020347
T542 1058-1078 Disease denotes autoimmune disorders http://purl.obolibrary.org/obo/MONDO_0007179
T543 1145-1153 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T439 6-7 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T440 8-13 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T441 25-32 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T442 36-41 http://purl.obolibrary.org/obo/UBERON_0000955 denotes Brain
T443 36-41 http://www.ebi.ac.uk/efo/EFO_0000302 denotes Brain
T444 169-171 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T445 281-283 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T446 296-298 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T447 316-318 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T448 331-333 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T449 339-343 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T450 350-352 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T451 366-368 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T452 386-388 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T453 402-404 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T454 491-496 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T455 547-549 http://purl.obolibrary.org/obo/CLO_0001407 denotes 52
T456 558-568 http://purl.obolibrary.org/obo/CL_0000738 denotes leucocytes
T457 570-576 http://purl.obolibrary.org/obo/CLO_0001757 denotes 1 cell
T458 839-841 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T459 854-856 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T460 872-874 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T461 887-889 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T462 895-899 http://purl.obolibrary.org/obo/CLO_0053704 denotes IL-8
T463 906-908 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T464 922-924 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T465 943-945 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T466 959-961 http://purl.obolibrary.org/obo/CLO_0008426 denotes pg
T467 1048-1053 http://purl.obolibrary.org/obo/UBERON_0000473 denotes tests
T468 1112-1122 http://purl.obolibrary.org/obo/CL_0000738 denotes leucocytes
T469 1124-1130 http://purl.obolibrary.org/obo/CLO_0001757 denotes 1 cell
T470 1213-1218 http://purl.obolibrary.org/obo/UBERON_0000955 denotes Brain
T471 1213-1218 http://www.ebi.ac.uk/efo/EFO_0000302 denotes Brain

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T12670 33-35 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T43631 92-101 Chemical denotes Lopinavir http://purl.obolibrary.org/obo/CHEBI_31781
T46173 102-111 Chemical denotes ritonavir http://purl.obolibrary.org/obo/CHEBI_45409
T83283 113-131 Chemical denotes hydroxychloroquine http://purl.obolibrary.org/obo/CHEBI_5801
T71030 133-143 Chemical denotes antibiotic http://purl.obolibrary.org/obo/CHEBI_33281
T54829 153-159 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805
T18974 238-240 Chemical denotes LL http://purl.obolibrary.org/obo/CHEBI_73531
T66393 271-273 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T35461 304-306 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T95050 339-341 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T8180 423-434 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T86158 538-545 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T45814 625-627 Chemical denotes NA http://purl.obolibrary.org/obo/CHEBI_33696
T60573 676-687 Chemical denotes oseltamivir http://purl.obolibrary.org/obo/CHEBI_7798
T68008 689-698 Chemical denotes darunavir http://purl.obolibrary.org/obo/CHEBI_367163
T60198 700-718 Chemical denotes methylprednisolone http://purl.obolibrary.org/obo/CHEBI_6888
T26901 723-734 Chemical denotes tocilizumab http://purl.obolibrary.org/obo/CHEBI_64360
T28596 829-831 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T20881 862-864 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T87785 895-897 Chemical denotes IL http://purl.obolibrary.org/obo/CHEBI_63895|http://purl.obolibrary.org/obo/CHEBI_74072
T57836 980-991 Chemical denotes ganglioside http://purl.obolibrary.org/obo/CHEBI_28892
T23927 1092-1099 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
674 303-307 Gene denotes IL- Gene:3569
675 338-342 Gene denotes IL- Gene:3576
676 373-378 Gene denotes TNF- Gene:7124
677 828-832 Gene denotes IL- Gene:3552
678 861-865 Gene denotes IL- Gene:3569
679 894-898 Gene denotes IL- Gene:3576
680 929-935 Gene denotes TNF- Gene:7124
702 270-274 Gene denotes IL- Gene:3552
767 17-31 Species denotes Dengue viruse Tax:11052
768 590-600 Species denotes SARS-CoV- Tax:2697049
769 1144-1154 Species denotes SARS-CoV- Tax:2697049
841 91-110 Chemical denotes Lopinavir/ritonavi MESH:C558899
922 217-229 Disease denotes hyporeflexi MESH:D012021
923 500-520 Disease denotes autoimmune disorder MESH:D001327
924 605-623 Disease denotes Demyelinating AID
925 1057-1077 Disease denotes autoimmune disorder MESH:D001327

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T310 241-276 Sentence denotes Manganotti et al. [33] RT-PCR IL-1:
T311 277-309 Sentence denotes 0.2 pg/ml (< 0.001 pg/ml), IL-6:
T312 310-344 Sentence denotes 113.0 pg/ml (0.8–6.4 pg/ml), IL-8:
T313 345-380 Sentence denotes 20.0 pg/ml (6.7–16.2 pg/ml), TNF-α:
T314 381-569 Sentence denotes 16.0 pg/ml (7.8–12.2 pg/ml) Negative anti-ganglioside antibodies, negative HIV, HBV, HCV negative serological tests for autoimmune disorders Increased total protein (52 mg/dl), leucocytes:
T315 570-619 Sentence denotes 1 cell/mm3, negative SARS-CoV-2 PCR Demyelinating
T316 620-798 Sentence denotes AIDP NA IVIG 400 mg/kg/day (5 days) Hydroxychloroquine, oseltamivir, darunavir, methylprednisolone and tocilizumab + mechanical invasive ventilation Improvement of motor symptoms
T317 799-834 Sentence denotes Manganotti et al. [33] RT-PCR IL-1:
T318 835-867 Sentence denotes 0.5 pg/ml (< 0.001 pg/ml), IL-6:
T319 868-900 Sentence denotes 9.8 pg/ml (0.8–6.4 pg/ml), IL-8:
T320 901-937 Sentence denotes 55.0 pg/ml (6.7–16.2 pg/ml), TNF- α:
T321 938-1123 Sentence denotes 16.0 pg/ml (7.8–12.2 pg/ml) Negative anti-ganglioside antibodies, negative HIV, HBV, HCV negative serological tests for autoimmune disorders Normal total protein (40 mg/dl), leucocytes:

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T694 218-230 Phenotype denotes hyporeflexia http://purl.obolibrary.org/obo/HP_0001265
T695 501-521 Phenotype denotes autoimmune disorders http://purl.obolibrary.org/obo/HP_0002960
T696 606-619 Phenotype denotes Demyelinating http://purl.obolibrary.org/obo/HP_0011096
T697 1058-1078 Phenotype denotes autoimmune disorders http://purl.obolibrary.org/obo/HP_0002960
T698 1166-1179 Phenotype denotes demyelinating http://purl.obolibrary.org/obo/HP_0011096

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T683 6-13 NCBITaxon:10376 denotes B virus
T684 25-41 NCBITaxon:10239 denotes viruses NA Brain
T685 92-101 DG_23 denotes Lopinavir
T686 102-111 DG_30 denotes ritonavir
T687 113-131 CHEBI:5801;CHEBI:5801;DG_20 denotes hydroxychloroquine
T688 133-143 CHEBI:33282;CHEBI:33282 denotes antibiotic
T689 304-308 PR:000001393 denotes IL-6
T690 339-343 PR:000001395 denotes IL-8
T691 374-379 PR:000000134 denotes TNF-α
T692 423-434 CHEBI:5386;CHEBI:5386 denotes ganglioside
T693 435-445 GO:0042571 denotes antibodies
T694 461-464 NCBITaxon:10376 denotes HBV
T695 501-511 UBERON:0002405 denotes autoimmune
T696 558-568 CL:0000738 denotes leucocytes
T697 591-601 SP_7 denotes SARS-CoV-2
T698 656-674 CHEBI:5801;CHEBI:5801;DG_20 denotes Hydroxychloroquine
T699 676-687 CHEBI:7798;CHEBI:7798 denotes oseltamivir
T700 689-698 CHEBI:367163;CHEBI:367163;DG_13 denotes darunavir
T701 700-718 CHEBI:12071;CHEBI:12071;DG_36 denotes methylprednisolone
T702 723-734 DG_35 denotes tocilizumab
T703 862-866 PR:000001393 denotes IL-6
T704 895-899 PR:000001395 denotes IL-8
T705 930-936 PR:000000134 denotes TNF- α
T706 980-991 CHEBI:5386;CHEBI:5386 denotes ganglioside
T707 992-1002 GO:0042571 denotes antibodies
T708 1018-1021 NCBITaxon:10376 denotes HBV
T709 1058-1068 UBERON:0002405 denotes autoimmune
T710 1112-1122 CL:0000738 denotes leucocytes
T711 1145-1155 SP_7 denotes SARS-CoV-2
T712 1184-1190 GO:0030424 denotes axonal

2_test

Id Subject Object Predicate Lexical cue
32840686-32662899-63205780 259-261 32662899 denotes [3
32840686-32662899-63205781 817-819 32662899 denotes [3