PMC:7445716 / 113-1826
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T1 | 1062-1081 | Body_part | denotes | Cerebrospinal fluid | http://purl.org/sig/ont/fma/fma20935 |
| T2 | 1083-1086 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T3 | 1158-1161 | Body_part | denotes | CSF | http://purl.org/sig/ont/fma/fma20935 |
| T4 | 1173-1176 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T5 | 1300-1314 | Body_part | denotes | immunoglobulin | http://purl.org/sig/ont/fma/fma62871 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 1062-1081 | Body_part | denotes | Cerebrospinal fluid | http://purl.obolibrary.org/obo/UBERON_0001359 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T3 | 6-30 | Disease | denotes | coronavirus disease-2019 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T4 | 32-40 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T5 | 144-167 | Disease | denotes | Guillain–Barré syndrome | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T6 | 169-172 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T7 | 178-225 | Disease | denotes | severe acute respiratory syndrome coronavirus-2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T8 | 178-211 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T9 | 227-235 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T10 | 675-678 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T11 | 700-708 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T12 | 742-750 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T13 | 871-874 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T14 | 942-989 | Disease | denotes | acute inflammatory demyelinating polyneuropathy | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T15 | 961-989 | Disease | denotes | demyelinating polyneuropathy | http://purl.obolibrary.org/obo/MONDO_0003334 |
| T16 | 975-989 | Disease | denotes | polyneuropathy | http://purl.obolibrary.org/obo/MONDO_0001824 |
| T17 | 1019-1041 | Disease | denotes | Miller Fisher syndrome | http://purl.obolibrary.org/obo/MONDO_0005851 |
| T18 | 1162-1170 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T19 | 1460-1463 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T20 | 1468-1476 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T21 | 1478-1486 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T22 | 1498-1501 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T23 | 1547-1557 | Disease | denotes | infectious | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T24 | 1558-1561 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 320-321 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T2 | 376-377 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T3 | 491-493 | http://purl.obolibrary.org/obo/CLO_0001407 | denotes | 52 |
| T4 | 508-509 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T5 | 553-555 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T6 | 560-562 | http://purl.obolibrary.org/obo/CLO_0001527 | denotes | 94 |
| T7 | 575-579 | http://purl.obolibrary.org/obo/UBERON_0003101 | denotes | male |
| T8 | 575-579 | http://www.ebi.ac.uk/efo/EFO_0000970 | denotes | male |
| T9 | 623-650 | http://purl.obolibrary.org/obo/UBERON_0001004 | denotes | respiratory and/or systemic |
| T10 | 881-882 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T11 | 1143-1145 | http://purl.obolibrary.org/obo/CLO_0054055 | denotes | 71 |
| T12 | 1195-1201 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
| T13 | 1242-1243 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T14 | 1374-1375 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T1 | 575-579 | Chemical | denotes | male | http://purl.obolibrary.org/obo/CHEBI_30780 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 17 | 178-225 | Species | denotes | severe acute respiratory syndrome coronavirus-2 | Tax:2697049 |
| 18 | 227-237 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 19 | 470-478 | Species | denotes | patients | Tax:9606 |
| 20 | 607-615 | Species | denotes | patients | Tax:9606 |
| 21 | 1162-1172 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 22 | 1226-1234 | Species | denotes | patients | Tax:9606 |
| 23 | 1316-1324 | Species | denotes | Patients | Tax:9606 |
| 24 | 623-634 | Species | denotes | respiratory | Tax:12814 |
| 25 | 6-30 | Disease | denotes | coronavirus disease-2019 | MESH:C000657245 |
| 26 | 32-40 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 27 | 700-708 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 28 | 742-750 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 29 | 961-989 | Disease | denotes | demyelinating polyneuropathy | MESH:D003711 |
| 30 | 1468-1476 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 31 | 1478-1486 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3 | 0-239 | Sentence | denotes | Since coronavirus disease-2019 (COVID-19) outbreak in January 2020, several pieces of evidence suggested an association between the spectrum of Guillain–Barré syndrome (GBS) and severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). |
| T4 | 240-362 | Sentence | denotes | Most findings were reported in the form of case reports or case series, whereas a comprehensive overview is still lacking. |
| T5 | 363-454 | Sentence | denotes | We conducted a systematic review and searched for all published cases until July 20th 2020. |
| T6 | 455-507 | Sentence | denotes | We included 73 patients reported in 52 publications. |
| T7 | 508-601 | Sentence | denotes | A broad age range was affected (mean 55, min 11–max 94 years) with male predominance (68.5%). |
| T8 | 602-709 | Sentence | denotes | Most patients showed respiratory and/or systemic symptoms, and developed GBS manifestations after COVID-19. |
| T9 | 710-771 | Sentence | denotes | However, asymptomatic cases for COVID-19 were also described. |
| T10 | 772-1061 | Sentence | denotes | The distributions of clinical variants and electrophysiological subtypes resemble those of classic GBS, with a higher prevalence of the classic sensorimotor form and the acute inflammatory demyelinating polyneuropathy, although rare variants like Miller Fisher syndrome were also reported. |
| T11 | 1062-1208 | Sentence | denotes | Cerebrospinal fluid (CSF) albuminocytological dissociation was present in around 71% cases, and CSF SARS-CoV-2 RNA was absent in all tested cases. |
| T12 | 1209-1315 | Sentence | denotes | More than 70% of patients showed a good prognosis, mostly after treatment with intravenous immunoglobulin. |
| T13 | 1316-1477 | Sentence | denotes | Patients with less favorable outcome were associated with a significantly older age in accordance with previous findings regarding both classic GBS and COVID-19. |
| T14 | 1478-1624 | Sentence | denotes | COVID-19-associated GBS seems to share most features of classic post-infectious GBS and possibly the same immune-mediated pathogenetic mechanisms. |
| T15 | 1625-1713 | Sentence | denotes | Nevertheless, more extensive epidemiological studies are needed to clarify these issues. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 961-974 | Phenotype | denotes | demyelinating | http://purl.obolibrary.org/obo/HP_0011096 |
| T2 | 975-989 | Phenotype | denotes | polyneuropathy | http://purl.obolibrary.org/obo/HP_0001271 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2 | 6-17 | NCBITaxon:11118 | denotes | coronavirus |
| T3 | 32-40 | SP_7 | denotes | COVID-19 |
| T4 | 178-190 | SP_7 | denotes | severe acute |
| T5 | 191-202 | SP_7;UBERON:0001004 | denotes | respiratory |
| T6 | 203-225 | SP_7 | denotes | syndrome coronavirus-2 |
| T7 | 227-237 | SP_7 | denotes | SARS-CoV-2 |
| T8 | 623-634 | UBERON:0001004 | denotes | respiratory |
| T9 | 700-708 | SP_7 | denotes | COVID-19 |
| T10 | 742-750 | SP_7 | denotes | COVID-19 |
| T11 | 916-928 | UBERON:0025534 | denotes | sensorimotor |
| T12 | 1062-1081 | UBERON:0001359 | denotes | Cerebrospinal fluid |
| T13 | 1162-1172 | SP_7 | denotes | SARS-CoV-2 |
| T14 | 1300-1314 | GO:0019814 | denotes | immunoglobulin |
| T15 | 1468-1476 | SP_7 | denotes | COVID-19 |
| T16 | 1478-1486 | SP_7 | denotes | COVID-19 |
| T17 | 1584-1590 | UBERON:0002405 | denotes | immune |
| T10972 | 6-17 | NCBITaxon:11118 | denotes | coronavirus |
| T99854 | 32-40 | SP_7 | denotes | COVID-19 |
| T18353 | 178-190 | SP_7 | denotes | severe acute |
| T67788 | 191-202 | SP_7;UBERON:0001004 | denotes | respiratory |
| T44876 | 203-225 | SP_7 | denotes | syndrome coronavirus-2 |
| T94167 | 227-237 | SP_7 | denotes | SARS-CoV-2 |
| T48693 | 623-634 | UBERON:0001004 | denotes | respiratory |
| T38646 | 700-708 | SP_7 | denotes | COVID-19 |
| T84453 | 742-750 | SP_7 | denotes | COVID-19 |
| T60920 | 916-928 | UBERON:0025534 | denotes | sensorimotor |
| T55041 | 1062-1081 | UBERON:0001359 | denotes | Cerebrospinal fluid |
| T3025 | 1162-1172 | SP_7 | denotes | SARS-CoV-2 |
| T70618 | 1300-1314 | GO:0019814 | denotes | immunoglobulin |
| T22608 | 1468-1476 | SP_7 | denotes | COVID-19 |
| T31870 | 1478-1486 | SP_7 | denotes | COVID-19 |
| T52580 | 1584-1590 | UBERON:0002405 | denotes | immune |