PMC:7445716 / 10281-11923
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T17 | 532-545 | Body_part | denotes | Cranial nerve | http://purl.org/sig/ont/fma/fma5865 |
| T18 | 573-590 | Body_part | denotes | oculomotor nerves | http://purl.org/sig/ont/fma/fma50864 |
| T19 | 687-698 | Body_part | denotes | lower limbs | http://purl.org/sig/ont/fma/fma7184 |
| T20 | 1063-1076 | Body_part | denotes | cranial nerve | http://purl.org/sig/ont/fma/fma5865 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T9 | 532-545 | Body_part | denotes | Cranial nerve | http://purl.obolibrary.org/obo/UBERON_0001785 |
| T10 | 540-545 | Body_part | denotes | nerve | http://purl.obolibrary.org/obo/UBERON_0001021 |
| T11 | 573-590 | Body_part | denotes | oculomotor nerves | http://purl.obolibrary.org/obo/UBERON_0001643 |
| T12 | 1063-1076 | Body_part | denotes | cranial nerve | http://purl.obolibrary.org/obo/UBERON_0001785 |
| T13 | 1071-1076 | Body_part | denotes | nerve | http://purl.obolibrary.org/obo/UBERON_0001021 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T125 | 21-24 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T126 | 86-89 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T127 | 130-138 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T128 | 198-206 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T129 | 284-287 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T130 | 769-775 | Disease | denotes | ataxia | http://purl.obolibrary.org/obo/MONDO_0000437 |
| T131 | 1248-1267 | Disease | denotes | respiratory failure | http://purl.obolibrary.org/obo/MONDO_0021113 |
| T132 | 1353-1356 | Disease | denotes | MFS | http://purl.obolibrary.org/obo/MONDO_0007947|http://purl.obolibrary.org/obo/MONDO_0019202|http://purl.obolibrary.org/obo/MONDO_0005851 |
| T135 | 1357-1360 | Disease | denotes | MFS | http://purl.obolibrary.org/obo/MONDO_0007947|http://purl.obolibrary.org/obo/MONDO_0019202|http://purl.obolibrary.org/obo/MONDO_0005851 |
| T138 | 1361-1364 | Disease | denotes | GBS | http://purl.obolibrary.org/obo/MONDO_0016218 |
| T139 | 1414-1420 | Disease | denotes | ataxia | http://purl.obolibrary.org/obo/MONDO_0000437 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T66 | 438-440 | http://purl.obolibrary.org/obo/CLO_0001407 | denotes | 52 |
| T67 | 540-545 | http://purl.obolibrary.org/obo/UBERON_0001021 | denotes | nerve |
| T68 | 584-590 | http://purl.obolibrary.org/obo/UBERON_0001021 | denotes | nerves |
| T69 | 693-698 | http://www.ebi.ac.uk/efo/EFO_0000876 | denotes | limbs |
| T70 | 743-745 | http://purl.obolibrary.org/obo/CLO_0050509 | denotes | 27 |
| T71 | 1022-1024 | http://purl.obolibrary.org/obo/CLO_0001313 | denotes | 36 |
| T72 | 1071-1076 | http://purl.obolibrary.org/obo/UBERON_0001021 | denotes | nerve |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 225 | 164-169 | Gene | denotes | min | Gene:966 |
| 226 | 58-66 | Species | denotes | patient | Tax:9606 |
| 227 | 1046-1054 | Species | denotes | patient | Tax:9606 |
| 228 | 1178-1186 | Species | denotes | patient | Tax:9606 |
| 229 | 1572-1580 | Species | denotes | patient | Tax:9606 |
| 230 | 129-137 | Disease | denotes | COVID-1 | MESH:C000657245 |
| 231 | 197-205 | Disease | denotes | COVID-1 | MESH:C000657245 |
| 232 | 473-500 | Disease | denotes | paraparesis or tetraparesi | MESH:D020335 |
| 233 | 713-722 | Disease | denotes | areflexi | MESH:D000071699 |
| 234 | 763-774 | Disease | denotes | gait ataxi | MESH:D020234 |
| 235 | 845-853 | Disease | denotes | weaknes | MESH:D018908 |
| 236 | 868-888 | Disease | denotes | flaccid tetraparesi | MESH:C565722 |
| 237 | 1062-1098 | Disease | denotes | cranial nerve deficits and dysphagi | MESH:D003680 |
| 238 | 1197-1217 | Disease | denotes | respiratory symptom | MESH:D012818 |
| 239 | 1247-1266 | Disease | denotes | respiratory failur | MESH:D012131 |
| 240 | 1352-1355 | Disease | denotes | MF | MESH:D008382 |
| 241 | 1356-1359 | Disease | denotes | /MF | MESH:D008382 |
| 242 | 1373-1382 | Disease | denotes | areflexi | MESH:D000071699 |
| 243 | 1413-1419 | Disease | denotes | ataxi | MESH:D001259 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T77 | 0-33 | Sentence | denotes | Clinical features of GBS spectrum |
| T78 | 34-153 | Sentence | denotes | In all (n = 72) but four patients [10, 37, 40, 56], GBS manifestations developed after those of COVID-19 [median (IQR): |
| T79 | 154-184 | Sentence | denotes | 14 (7–20), min 2–max 33 days]. |
| T80 | 185-363 | Sentence | denotes | Differently, COVID-19 symptoms began concurrent in one case [37], 1 day [40] and 8 days [55] after GBS onset in two other cases and never developed in another one [10] (Table 1). |
| T81 | 364-531 | Sentence | denotes | Common clinical manifestations at onset included sensory symptoms (72.2%, 52/72) alone or in combination with paraparesis or tetraparesis (65.2%, 47/72, respectively). |
| T82 | 532-646 | Sentence | denotes | Cranial nerve involvement (e.g., facial, oculomotor nerves) was less frequently described at onset (16.7%, 12/72). |
| T83 | 647-827 | Sentence | denotes | Moreover, all cases but one [26] showed lower limbs or generalized areflexia, whereas in 37.5% (27/72) of the cases, gait ataxia was reported at onset or during the disease course. |
| T84 | 828-1147 | Sentence | denotes | Even if ascending weakness evolving into flaccid tetraparesis (76.4%, 55/72) and spreading/persistence of sensory symptoms (84.7%, 61/72) represented the most common clinical evolutions, 50.0% (36/72) and 23.6% (17/72) patients showed cranial nerve deficits and dysphagia, respectively, during disease course (Table 1). |
| T85 | 1148-1278 | Sentence | denotes | Moreover, 36.1% (26/72) of the patients developed respiratory symptoms, and some of them evolved to respiratory failure (Table 1). |
| T86 | 1279-1338 | Sentence | denotes | Autonomic disturbances were rarely reported (16.7%, 12/72). |
| T87 | 1339-1523 | Sentence | denotes | In cases with MFS/MFS-GBS overlap, areflexia, oculomotor disturbances, and ataxia were present in 100% (9/9), 66.7% (6/9) and 66.7% (6/9), respectively [8, 19, 23, 30, 32, 33, 43, 44]. |
| T88 | 1524-1642 | Sentence | denotes | The median of time to nadir was calculated in 40 patients with available data and resulted 4 days (IQR 3–9) (Table 1). |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T37 | 474-485 | Phenotype | denotes | paraparesis | http://purl.obolibrary.org/obo/HP_0002385 |
| T38 | 489-501 | Phenotype | denotes | tetraparesis | http://purl.obolibrary.org/obo/HP_0002273 |
| T39 | 532-557 | Phenotype | denotes | Cranial nerve involvement | http://purl.obolibrary.org/obo/HP_0001291 |
| T40 | 714-723 | Phenotype | denotes | areflexia | http://purl.obolibrary.org/obo/HP_0001284 |
| T41 | 764-775 | Phenotype | denotes | gait ataxia | http://purl.obolibrary.org/obo/HP_0002066 |
| T42 | 877-889 | Phenotype | denotes | tetraparesis | http://purl.obolibrary.org/obo/HP_0002273 |
| T43 | 1090-1099 | Phenotype | denotes | dysphagia | http://purl.obolibrary.org/obo/HP_0002015 |
| T44 | 1248-1267 | Phenotype | denotes | respiratory failure | http://purl.obolibrary.org/obo/HP_0002878 |
| T45 | 1374-1383 | Phenotype | denotes | areflexia | http://purl.obolibrary.org/obo/HP_0001284 |
| T46 | 1414-1420 | Phenotype | denotes | ataxia | http://purl.obolibrary.org/obo/HP_0001251 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T91 | 130-138 | SP_7 | denotes | COVID-19 |
| T92 | 198-206 | SP_7 | denotes | COVID-19 |
| T93 | 532-545 | UBERON:0001785 | denotes | Cranial nerve |
| T94 | 565-571 | UBERON:0001456 | denotes | facial |
| T95 | 573-590 | UBERON:0001643 | denotes | oculomotor nerves |
| T96 | 693-698 | UBERON:0002103 | denotes | limbs |
| T97 | 1063-1076 | UBERON:0001785 | denotes | cranial nerve |
| T98 | 1198-1209 | UBERON:0001004 | denotes | respiratory |
| T99 | 1248-1259 | UBERON:0001004 | denotes | respiratory |
| T100 | 1385-1395 | GO:0050905 | denotes | oculomotor |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 32840686-32588185-63205654 | 68-70 | 32588185 | denotes | [1 |
| 32840686-32696488-63205655 | 72-74 | 32696488 | denotes | 3 |
| 32840686-32246917-63205656 | 80-82 | 32246917 | denotes | 5 |
| 32840686-32696488-63205657 | 245-247 | 32696488 | denotes | [3 |
| 32840686-32540883-63205658 | 273-275 | 32540883 | denotes | [5 |
| 32840686-32588185-63205659 | 348-350 | 32588185 | denotes | [1 |
| 32840686-32410788-63205660 | 675-677 | 32410788 | denotes | [2 |
| 32840686-32613542-63205661 | 1491-1492 | 32613542 | denotes | [ |
| 32840686-32458195-63205662 | 1494-1496 | 32458195 | denotes | 1 |
| 32840686-32303650-63205663 | 1498-1500 | 32303650 | denotes | 2 |
| 32840686-32819899-63205664 | 1502-1504 | 32819899 | denotes | 3 |
| 32840686-32529516-63205665 | 1506-1508 | 32529516 | denotes | 3 |
| 32840686-32662899-63205666 | 1510-1512 | 32662899 | denotes | 3 |
| 32840686-32453100-63205667 | 1514-1516 | 32453100 | denotes | 4 |
| 32840686-32503084-63205668 | 1518-1520 | 32503084 | denotes | 4 |