PMC:7443692 / 15513-16040 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PMC/sourceid/7443692","sourcedb":"PMC","sourceid":"7443692","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7443692","text":"(A) Glycans released from SARS-CoV-2 S protein trimer immunogen were permethylated and analyzed by MSn. Structures were assigned and grouped by type and structural features, and prevalence was determined based on ion current. The pie chart shows basic division by broad N-glycan type. The bar graph provides additional detail about the glycans detected. The most abundant structure with a unique categorization by glycomics for each N-glycan type in the pie chart, or above each feature category in the bar graph, is indicated.","tracks":[{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T107","span":{"begin":39,"end":46},"obj":"Chemical"},{"id":"T108","span":{"begin":213,"end":216},"obj":"Chemical"},{"id":"T109","span":{"begin":270,"end":278},"obj":"Chemical"},{"id":"T110","span":{"begin":336,"end":343},"obj":"Chemical"},{"id":"T111","span":{"begin":433,"end":441},"obj":"Chemical"}],"attributes":[{"id":"A107","pred":"chebi_id","subj":"T107","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A111","pred":"chebi_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/CHEBI_59520"},{"id":"A108","pred":"chebi_id","subj":"T108","obj":"http://purl.obolibrary.org/obo/CHEBI_24870"},{"id":"A109","pred":"chebi_id","subj":"T109","obj":"http://purl.obolibrary.org/obo/CHEBI_59520"},{"id":"A110","pred":"chebi_id","subj":"T110","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"subj":"T107","pred":"source","obj":"LitCovid-sample-CHEBI"},{"subj":"T108","pred":"source","obj":"LitCovid-sample-CHEBI"},{"subj":"T109","pred":"source","obj":"LitCovid-sample-CHEBI"},{"subj":"T110","pred":"source","obj":"LitCovid-sample-CHEBI"},{"subj":"T111","pred":"source","obj":"LitCovid-sample-CHEBI"}]},{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T56","span":{"begin":26,"end":36},"obj":"Species"}],"attributes":[{"id":"A56","pred":"ncbi_taxonomy_id","subj":"T56","obj":"NCBItxid:2697049"},{"subj":"T56","pred":"source","obj":"LitCovid-sample-PD-NCBITaxon"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}]},{"project":"LitCovid-sample-sentences","denotations":[{"id":"T86","span":{"begin":0,"end":103},"obj":"Sentence"},{"id":"T87","span":{"begin":104,"end":225},"obj":"Sentence"},{"id":"T88","span":{"begin":226,"end":284},"obj":"Sentence"},{"id":"T89","span":{"begin":285,"end":353},"obj":"Sentence"},{"id":"T90","span":{"begin":354,"end":527},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T86","pred":"source","obj":"LitCovid-sample-sentences"},{"subj":"T87","pred":"source","obj":"LitCovid-sample-sentences"},{"subj":"T88","pred":"source","obj":"LitCovid-sample-sentences"},{"subj":"T89","pred":"source","obj":"LitCovid-sample-sentences"},{"subj":"T90","pred":"source","obj":"LitCovid-sample-sentences"}]},{"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T40","span":{"begin":26,"end":36},"obj":"Disease"}],"attributes":[{"id":"A40","pred":"mondo_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"subj":"T40","pred":"source","obj":"LitCovid-sample-PD-MONDO"}]},{"project":"LitCovid-sample-UniProt","denotations":[{"id":"T1658","span":{"begin":37,"end":46},"obj":"Protein"}],"attributes":[{"id":"A1658","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9UIP0"},{"id":"A1659","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9UIN9"},{"id":"A1660","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9UIN8"},{"id":"A1661","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9UIN7"},{"id":"A1662","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9UIN6"},{"id":"A1663","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9UBH8"},{"id":"A1664","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NRH8"},{"id":"A1665","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NRH7"},{"id":"A1666","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NRH6"},{"id":"A1667","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NRH5"},{"id":"A1668","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NRH4"},{"id":"A1669","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NPG5"},{"id":"A1670","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NPE0"},{"id":"A1671","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q9NP52"},{"id":"A1672","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q95IF9"},{"id":"A1673","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q8N5P3"},{"id":"A1674","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q8IZU6"},{"id":"A1675","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q8IZU5"},{"id":"A1676","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q8IZU4"},{"id":"A1677","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q86Z04"},{"id":"A1678","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q7YR44"},{"id":"A1679","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q7LA71"},{"id":"A1680","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q7LA70"},{"id":"A1681","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q5STD2"},{"id":"A1682","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q5SQ85"},{"id":"A1683","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q1XI16"},{"id":"A1684","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q1XI12"},{"id":"A1685","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/Q15517"},{"id":"A1686","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/O43509"},{"id":"A1687","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/O19084"},{"id":"A1688","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/B0UYZ7"},{"id":"A1689","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/B0S7V2"},{"id":"A1690","pred":"uniprot_id","subj":"T1658","obj":"https://www.uniprot.org/uniprot/A5A6L9"},{"subj":"T1658","pred":"source","obj":"LitCovid-sample-UniProt"}]},{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T66","span":{"begin":39,"end":46},"obj":"Body_part"}],"attributes":[{"id":"A66","pred":"fma_id","subj":"T66","obj":"http://purl.org/sig/ont/fma/fma67257"},{"subj":"T66","pred":"source","obj":"LitCovid-sample-PD-FMA"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-sample-CHEBI","color":"#dd93ec","default":true},{"id":"LitCovid-sample-PD-NCBITaxon","color":"#93ecc3"},{"id":"LitCovid-sample-sentences","color":"#eca993"},{"id":"LitCovid-sample-PD-MONDO","color":"#9396ec"},{"id":"LitCovid-sample-UniProt","color":"#b0ec93"},{"id":"LitCovid-sample-PD-FMA","color":"#ec93ca"}]}]}}