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PMC:7441788 / 7960-8418 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T32 52-59 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 137-149 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T34 137-141 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T66 78-86 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T86 137-141 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T87 291-299 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T90 52-59 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T91 170-172 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T92 303-305 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T63 52-59 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T64 170-172 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T65 303-305 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T70 78-86 Species denotes SARS-CoV NCBItxid:694009

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
353 164-168 Gene denotes ACE2 Gene:59272
354 243-247 Gene denotes ACE2 Gene:59272
355 388-392 Gene denotes ACE2 Gene:59272
356 449-453 Gene denotes ACE2 Gene:59272
357 50-51 Gene denotes S Gene:43740568
360 78-86 Species denotes SARS-CoV Tax:694009
363 287-290 Species denotes CoV Tax:11118
366 170-172 Chemical denotes CQ MESH:D002738
367 303-305 Chemical denotes CQ MESH:D002738
368 306-309 Chemical denotes HCQ MESH:D006886

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T51 50-59 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T84 164-168 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T85 243-247 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T86 388-392 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T87 449-453 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T66 137-141 http://purl.obolibrary.org/obo/CL_0000000 denotes cell
T67 235-239 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T32 52-59 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 137-149 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T34 137-141 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T3 19-28 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 33-46 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 191-204 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 212-234 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 221-234 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 362-384 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T9 371-384 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T59 78-86 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T3 19-28 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 33-46 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 191-204 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 212-234 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 221-234 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 362-384 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T9 371-384 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 19-28 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 33-46 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 191-204 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 212-234 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 221-234 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 362-384 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T9 371-384 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
353 164-168 Gene denotes ACE2 Gene:59272
354 243-247 Gene denotes ACE2 Gene:59272
355 388-392 Gene denotes ACE2 Gene:59272
356 449-453 Gene denotes ACE2 Gene:59272
357 50-51 Gene denotes S Gene:43740568
360 78-86 Species denotes SARS-CoV Tax:694009
363 287-290 Species denotes CoV Tax:11118
366 170-172 Chemical denotes CQ MESH:D002738
367 303-305 Chemical denotes CQ MESH:D002738
368 306-309 Chemical denotes HCQ MESH:D006886

2_test

Id Subject Object Predicate Lexical cue
32496926-16115318-132195668 249-251 16115318 denotes 13