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PMC:7441788 / 7899-8357 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T32 113-120 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 198-210 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T34 198-202 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T65 15-23 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T66 139-147 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T86 198-202 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T87 352-360 http://purl.obolibrary.org/obo/CLO_0001658 denotes activity

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T89 44-46 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T90 113-120 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T91 231-233 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T92 364-366 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T62 44-46 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T63 113-120 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T64 231-233 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T65 364-366 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T69 15-25 Species denotes SARS-CoV-2 NCBItxid:2697049
T70 139-147 Species denotes SARS-CoV NCBItxid:694009

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
353 225-229 Gene denotes ACE2 Gene:59272
354 304-308 Gene denotes ACE2 Gene:59272
355 449-453 Gene denotes ACE2 Gene:59272
357 111-112 Gene denotes S Gene:43740568
360 139-147 Species denotes SARS-CoV Tax:694009
362 15-25 Species denotes SARS-CoV-2 Tax:2697049
363 348-351 Species denotes CoV Tax:11118
365 44-46 Chemical denotes CQ MESH:D002738
366 231-233 Chemical denotes CQ MESH:D002738
367 364-366 Chemical denotes CQ MESH:D002738
368 367-370 Chemical denotes HCQ MESH:D006886

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T51 111-120 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T84 225-229 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T85 304-308 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T86 449-453 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T66 198-202 http://purl.obolibrary.org/obo/CL_0000000 denotes cell
T67 296-300 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T32 113-120 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 198-210 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T34 198-202 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T3 80-89 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 94-107 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 252-265 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 273-295 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 282-295 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 423-445 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T9 432-445 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T58 15-25 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T59 139-147 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T3 80-89 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 94-107 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 252-265 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 273-295 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 282-295 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 423-445 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T9 432-445 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 80-89 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 94-107 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 252-265 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 273-295 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 282-295 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 423-445 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T9 432-445 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
353 225-229 Gene denotes ACE2 Gene:59272
354 304-308 Gene denotes ACE2 Gene:59272
355 449-453 Gene denotes ACE2 Gene:59272
357 111-112 Gene denotes S Gene:43740568
360 139-147 Species denotes SARS-CoV Tax:694009
362 15-25 Species denotes SARS-CoV-2 Tax:2697049
363 348-351 Species denotes CoV Tax:11118
365 44-46 Chemical denotes CQ MESH:D002738
366 231-233 Chemical denotes CQ MESH:D002738
367 364-366 Chemical denotes CQ MESH:D002738
368 367-370 Chemical denotes HCQ MESH:D006886

2_test

Id Subject Object Predicate Lexical cue
32496926-16115318-132195668 310-312 16115318 denotes 13