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PMC:7441788 / 7825-8213 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T31 56-61 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T32 187-194 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 272-284 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T34 272-276 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T65 89-97 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T66 213-221 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T85 49-61 http://purl.obolibrary.org/obo/CLO_0051719 denotes VeroE6 cells
T86 272-276 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T88 35-37 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T89 118-120 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T90 187-194 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T91 305-307 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-MedDRA

Id Subject Object Predicate Lexical cue meddra_id
T5 4-17 http://purl.bioontology.org/ontology/MEDDRA/10022891 denotes investigation http://purl.bioontology.org/ontology/MEDDRA/10062026

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T61 35-37 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T62 118-120 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638
T63 187-194 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T64 305-307 Chemical denotes CQ http://purl.obolibrary.org/obo/CHEBI_3638

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T69 89-99 Species denotes SARS-CoV-2 NCBItxid:2697049
T70 213-221 Species denotes SARS-CoV NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T66 0-388 Sentence denotes The investigation of the effect of CQ on ACE2 in VeroE6 cells showed that effective anti-SARS-CoV-2 concentrations of CQ had no significant effect on the synthesis and glycosylation of S protein on the surface of SARS-CoV, and although it had no significant effect on the cell surface expression of ACE2, CQ could destroy the glycosylation at the terminal glycosylation site of ACE2 [13].

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
352 41-45 Gene denotes ACE2 Gene:103231639
353 299-303 Gene denotes ACE2 Gene:59272
354 378-382 Gene denotes ACE2 Gene:59272
357 185-186 Gene denotes S Gene:43740568
360 213-221 Species denotes SARS-CoV Tax:694009
362 89-99 Species denotes SARS-CoV-2 Tax:2697049
364 35-37 Chemical denotes CQ MESH:D002738
365 118-120 Chemical denotes CQ MESH:D002738
366 305-307 Chemical denotes CQ MESH:D002738
369 49-55 CellLine denotes VeroE6 CVCL:0574

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T50 41-45 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T51 185-194 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T84 299-303 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T85 378-382 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T65 56-61 http://purl.obolibrary.org/obo/CL_0000000 denotes cells
T66 272-276 http://purl.obolibrary.org/obo/CL_0000000 denotes cell
T67 370-374 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T31 56-61 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T32 187-194 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T33 272-284 Body_part denotes cell surface http://purl.org/sig/ont/fma/fma67653
T34 272-276 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T3 154-163 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 168-181 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 326-339 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 347-369 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 356-369 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T58 89-99 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T59 213-221 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T3 154-163 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 168-181 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 326-339 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 347-369 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 356-369 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 154-163 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T4 168-181 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 326-339 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 347-369 http://purl.obolibrary.org/obo/GO_0033578 denotes terminal glycosylation
T7 356-369 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
352 41-45 Gene denotes ACE2 Gene:103231639
353 299-303 Gene denotes ACE2 Gene:59272
354 378-382 Gene denotes ACE2 Gene:59272
357 185-186 Gene denotes S Gene:43740568
360 213-221 Species denotes SARS-CoV Tax:694009
362 89-99 Species denotes SARS-CoV-2 Tax:2697049
364 35-37 Chemical denotes CQ MESH:D002738
365 118-120 Chemical denotes CQ MESH:D002738
366 305-307 Chemical denotes CQ MESH:D002738
369 49-55 CellLine denotes VeroE6 CVCL:0574

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T66 0-388 Sentence denotes The investigation of the effect of CQ on ACE2 in VeroE6 cells showed that effective anti-SARS-CoV-2 concentrations of CQ had no significant effect on the synthesis and glycosylation of S protein on the surface of SARS-CoV, and although it had no significant effect on the cell surface expression of ACE2, CQ could destroy the glycosylation at the terminal glycosylation site of ACE2 [13].

2_test

Id Subject Object Predicate Lexical cue
32496926-16115318-132195668 384-386 16115318 denotes 13